BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006646
         (1140 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518749.1| PREDICTED: putative exosome complex componen...   435   e-120
ref|XP_003613959.1| Exosome complex exonuclease RRP40 [Medicago ...   417   e-114
ref|XP_002318044.1| predicted protein [Populus trichocarpa] gi|1...   410   e-112
ref|XP_002282635.1| PREDICTED: putative exosome complex componen...   393   e-107
ref|XP_004138110.1| PREDICTED: putative exosome complex componen...   389   e-106

>ref|XP_003518749.1| PREDICTED: putative exosome complex component rrp40-like [Glycine
           max]
          Length = 240

 Score =  435 bits (1119), Expect = e-120
 Identities = 217/241 (90%), Positives = 228/241 (94%)
 Frame = +1

Query: 223 METKXXXXXXXTNLVDQIVCPGDVVLDLSSMTNQTIKLGGGLRQDCDMISVMKAGKLRFS 402
           METK       TNLVDQ VCPGDV+LDLS+MTNQTIKLGGGLRQDCD ISVMKAG+LRFS
Sbjct: 1   METKSSSSS--TNLVDQSVCPGDVILDLSNMTNQTIKLGGGLRQDCDAISVMKAGRLRFS 58

Query: 403 KPNKYWVENSQKRYVPHAEDSVLGIVLDSRSDNFLVDIKGPTLAFLPVLAFEGGTRRNIP 582
           KPNKYWVENSQKRYVPHAEDSVLGIV+DSRSDNFLVDIKGP LAFLPVLAFEGGTRRNIP
Sbjct: 59  KPNKYWVENSQKRYVPHAEDSVLGIVVDSRSDNFLVDIKGPALAFLPVLAFEGGTRRNIP 118

Query: 583 KFEVGTLIYVRVVKANPGMNPELSCTDASGKAAEFGALKDGYMFECTTGLSRMLLSSPTC 762
           +FE+GTLIY RVVKANPGMNPEL+CTDASGKAAEFGALKDGYMFECTTGLSRMLLSSPTC
Sbjct: 119 RFEIGTLIYARVVKANPGMNPELACTDASGKAAEFGALKDGYMFECTTGLSRMLLSSPTC 178

Query: 763 PVLDALGKKLSFEIAVGLNGRVWVNAASPSTTIIVANAIMNSETLSGVQQRIMVEKLLQR 942
           PVLDALGKKLSFEIAVGLNGRVWV+AASP TTI+VANAIMNSETLSG QQRIMVEKLL+R
Sbjct: 179 PVLDALGKKLSFEIAVGLNGRVWVSAASPQTTIVVANAIMNSETLSGAQQRIMVEKLLER 238

Query: 943 V 945
           +
Sbjct: 239 I 239


>ref|XP_003613959.1| Exosome complex exonuclease RRP40 [Medicago truncatula]
           gi|217074508|gb|ACJ85614.1| unknown [Medicago
           truncatula] gi|355515294|gb|AES96917.1| Exosome complex
           exonuclease RRP40 [Medicago truncatula]
           gi|388510130|gb|AFK43131.1| unknown [Medicago
           truncatula]
          Length = 240

 Score =  417 bits (1072), Expect = e-114
 Identities = 207/231 (89%), Positives = 222/231 (96%)
 Frame = +1

Query: 256 TNLVDQIVCPGDVVLDLSSMTNQTIKLGGGLRQDCDMISVMKAGKLRFSKPNKYWVENSQ 435
           TN VDQ+V PGDVVLDLS+MTNQTIKLGGGLRQD D+ISVMKAG+LRFSKPNKYWVE+SQ
Sbjct: 10  TNFVDQLVYPGDVVLDLSTMTNQTIKLGGGLRQDGDVISVMKAGRLRFSKPNKYWVESSQ 69

Query: 436 KRYVPHAEDSVLGIVLDSRSDNFLVDIKGPTLAFLPVLAFEGGTRRNIPKFEVGTLIYVR 615
           KRYVPHAEDSVLGI++DSRSDNFLVDIKGPTLAFLPVLAFEGGTRRNIPKFEVG LIYVR
Sbjct: 70  KRYVPHAEDSVLGIIVDSRSDNFLVDIKGPTLAFLPVLAFEGGTRRNIPKFEVGALIYVR 129

Query: 616 VVKANPGMNPELSCTDASGKAAEFGALKDGYMFECTTGLSRMLLSSPTCPVLDALGKKLS 795
           VVKA PGMNPELSCTDASGKA EFGALK+GYMFEC+TGLSRMLLS+PTCPVLD LGKKLS
Sbjct: 130 VVKAIPGMNPELSCTDASGKAGEFGALKEGYMFECSTGLSRMLLSTPTCPVLDTLGKKLS 189

Query: 796 FEIAVGLNGRVWVNAASPSTTIIVANAIMNSETLSGVQQRIMVEKLLQRVK 948
           FEIAVGLNGRVWVNA+SPSTTIIVANA++NSE LSGVQQ+IM EKLLQRV+
Sbjct: 190 FEIAVGLNGRVWVNASSPSTTIIVANALINSEVLSGVQQKIMAEKLLQRVQ 240


>ref|XP_002318044.1| predicted protein [Populus trichocarpa] gi|118482713|gb|ABK93275.1|
           unknown [Populus trichocarpa]
           gi|222858717|gb|EEE96264.1| predicted protein [Populus
           trichocarpa]
          Length = 242

 Score =  410 bits (1055), Expect = e-112
 Identities = 203/228 (89%), Positives = 216/228 (94%)
 Frame = +1

Query: 265 VDQIVCPGDVVLDLSSMTNQTIKLGGGLRQDCDMISVMKAGKLRFSKPNKYWVENSQKRY 444
           +D +V PGDVV+DLSSMTNQTIKLG GLRQDCD ISVMKAGKLRFSKPNKYWVE SQKRY
Sbjct: 13  IDNLVVPGDVVVDLSSMTNQTIKLGSGLRQDCDAISVMKAGKLRFSKPNKYWVETSQKRY 72

Query: 445 VPHAEDSVLGIVLDSRSDNFLVDIKGPTLAFLPVLAFEGGTRRNIPKFEVGTLIYVRVVK 624
           VP AEDSVLGIV+DS+SDNFL+DIKGP LAFLPVLAFEGGTRRNIPKFE GTL+YVRVVK
Sbjct: 73  VPCAEDSVLGIVVDSKSDNFLIDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVK 132

Query: 625 ANPGMNPELSCTDASGKAAEFGALKDGYMFECTTGLSRMLLSSPTCPVLDALGKKLSFEI 804
           ANPGMNPELSCTDASGKAAEFGALKDGYMFEC+TGLSRMLLSSPTCPVL+ALGKKLSFEI
Sbjct: 133 ANPGMNPELSCTDASGKAAEFGALKDGYMFECSTGLSRMLLSSPTCPVLEALGKKLSFEI 192

Query: 805 AVGLNGRVWVNAASPSTTIIVANAIMNSETLSGVQQRIMVEKLLQRVK 948
           AVGLNGRVWVNA SPS  IIVANAIMNSETLSGVQQ+IM EKLLQ+++
Sbjct: 193 AVGLNGRVWVNANSPSIVIIVANAIMNSETLSGVQQKIMAEKLLQKIQ 240


>ref|XP_002282635.1| PREDICTED: putative exosome complex component rrp40 [Vitis
           vinifera] gi|297733775|emb|CBI15022.3| unnamed protein
           product [Vitis vinifera]
          Length = 237

 Score =  393 bits (1010), Expect = e-107
 Identities = 195/230 (84%), Positives = 214/230 (93%)
 Frame = +1

Query: 259 NLVDQIVCPGDVVLDLSSMTNQTIKLGGGLRQDCDMISVMKAGKLRFSKPNKYWVENSQK 438
           + VDQ+V PGDVVLDLS M NQTIKLGGGL QDCD I+V KAG+LRFSKPNKYWVE+SQK
Sbjct: 8   SFVDQLVVPGDVVLDLSKMGNQTIKLGGGLHQDCDAITVTKAGRLRFSKPNKYWVESSQK 67

Query: 439 RYVPHAEDSVLGIVLDSRSDNFLVDIKGPTLAFLPVLAFEGGTRRNIPKFEVGTLIYVRV 618
           RYVP  ED+VLGIV+DS++DNFLVDIKGP LAFLPVLAFEGGTRRNIPKFE GTL+YVRV
Sbjct: 68  RYVPCVEDTVLGIVVDSKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRV 127

Query: 619 VKANPGMNPELSCTDASGKAAEFGALKDGYMFECTTGLSRMLLSSPTCPVLDALGKKLSF 798
           VKAN GMNPELSCTDASGKAAEFG LKDGYMFE +TGLSRMLLSSPTCPVL+ALGKKLSF
Sbjct: 128 VKANTGMNPELSCTDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPTCPVLEALGKKLSF 187

Query: 799 EIAVGLNGRVWVNAASPSTTIIVANAIMNSETLSGVQQRIMVEKLLQRVK 948
           EIAVGLNGRVWVNA+SPST I+VANAIMNSE+LS VQQ+IMV+KLLQR++
Sbjct: 188 EIAVGLNGRVWVNASSPSTVILVANAIMNSESLSVVQQKIMVDKLLQRIQ 237


>ref|XP_004138110.1| PREDICTED: putative exosome complex component rrp40-like [Cucumis
           sativus] gi|449477413|ref|XP_004155016.1| PREDICTED:
           putative exosome complex component rrp40-like [Cucumis
           sativus]
          Length = 243

 Score =  389 bits (999), Expect = e-106
 Identities = 194/231 (83%), Positives = 212/231 (91%)
 Frame = +1

Query: 256 TNLVDQIVCPGDVVLDLSSMTNQTIKLGGGLRQDCDMISVMKAGKLRFSKPNKYWVENSQ 435
           + LVDQ V PGDVVLDLS+M N+TIKLGGGLRQD D ISV K GKLRFSKPNKYWVE+SQ
Sbjct: 10  STLVDQPVVPGDVVLDLSNMANETIKLGGGLRQDQDAISVSKVGKLRFSKPNKYWVESSQ 69

Query: 436 KRYVPHAEDSVLGIVLDSRSDNFLVDIKGPTLAFLPVLAFEGGTRRNIPKFEVGTLIYVR 615
           KRYVP AED VLGIVLDSR+DNFLVDIKGP+LAFLPVLAFEGGTRRNIPKFE+G L+YVR
Sbjct: 70  KRYVPCAEDCVLGIVLDSRADNFLVDIKGPSLAFLPVLAFEGGTRRNIPKFEMGALLYVR 129

Query: 616 VVKANPGMNPELSCTDASGKAAEFGALKDGYMFECTTGLSRMLLSSPTCPVLDALGKKLS 795
           VVK NPGMNPEL+CTDASGKAA FG LKDGYMFEC+TGLSRMLLSSP+CPVL++LGKKLS
Sbjct: 130 VVKVNPGMNPELACTDASGKAAGFGLLKDGYMFECSTGLSRMLLSSPSCPVLESLGKKLS 189

Query: 796 FEIAVGLNGRVWVNAASPSTTIIVANAIMNSETLSGVQQRIMVEKLLQRVK 948
           FE AVGLNGRVWVNA SPST I+V+NAI+NSETLSGVQQRIMV+KLL  +K
Sbjct: 190 FETAVGLNGRVWVNADSPSTIIVVSNAILNSETLSGVQQRIMVDKLLANLK 240