BLASTX nr result

ID: Glycyrrhiza23_contig00006561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006561
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE71215.1| putative 60S ribosomal protein L1 [Trifolium pra...    81   1e-13
ref|XP_003590168.1| 60S ribosomal protein L4 [Medicago truncatul...    81   1e-13
dbj|BAE71290.1| putative 60S ribosomal protein L1 [Trifolium pra...    79   4e-13
ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-1-like [...    78   6e-13
ref|XP_003537249.1| PREDICTED: 60S ribosomal protein L4-1-like i...    77   1e-12

>dbj|BAE71215.1| putative 60S ribosomal protein L1 [Trifolium pratense]
           gi|84468330|dbj|BAE71248.1| putative 60S ribosomal
           protein L1 [Trifolium pratense]
          Length = 406

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/45 (86%), Positives = 42/45 (93%)
 Frame = +1

Query: 73  RPLVTVQALEADMATDTTTTLPIPDVMRASIRPDIVTFVHSNISK 207
           RPLVTVQ L++DMATD+ TTLPIPDVMRASIRPDIV FVHSNISK
Sbjct: 7   RPLVTVQTLDSDMATDSPTTLPIPDVMRASIRPDIVNFVHSNISK 51


>ref|XP_003590168.1| 60S ribosomal protein L4 [Medicago truncatula]
           gi|355479216|gb|AES60419.1| 60S ribosomal protein L4
           [Medicago truncatula]
          Length = 406

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/45 (86%), Positives = 42/45 (93%)
 Frame = +1

Query: 73  RPLVTVQALEADMATDTTTTLPIPDVMRASIRPDIVTFVHSNISK 207
           RPLVTVQ L++DMATD+ TTLPIPDVMRASIRPDIV FVHSNISK
Sbjct: 7   RPLVTVQTLDSDMATDSQTTLPIPDVMRASIRPDIVNFVHSNISK 51


>dbj|BAE71290.1| putative 60S ribosomal protein L1 [Trifolium pratense]
          Length = 406

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/45 (84%), Positives = 41/45 (91%)
 Frame = +1

Query: 73  RPLVTVQALEADMATDTTTTLPIPDVMRASIRPDIVTFVHSNISK 207
           RPLVTVQ L++DMATD+  TLPIPDVMRASIRPDIV FVHSNISK
Sbjct: 7   RPLVTVQTLDSDMATDSPNTLPIPDVMRASIRPDIVNFVHSNISK 51


>ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-1-like [Glycine max]
          Length = 405

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 37/45 (82%), Positives = 41/45 (91%)
 Frame = +1

Query: 73  RPLVTVQALEADMATDTTTTLPIPDVMRASIRPDIVTFVHSNISK 207
           RPLVTVQAL+ DMATD + T+PIPDVM+ASIRPDIV FVHSNISK
Sbjct: 6   RPLVTVQALDGDMATDASATVPIPDVMKASIRPDIVNFVHSNISK 50


>ref|XP_003537249.1| PREDICTED: 60S ribosomal protein L4-1-like isoform 2 [Glycine max]
          Length = 371

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/45 (80%), Positives = 42/45 (93%)
 Frame = +1

Query: 73  RPLVTVQALEADMATDTTTTLPIPDVMRASIRPDIVTFVHSNISK 207
           RPLVTVQAL++DMATD + T+PIPDVM++SIRPDIV FVHSNISK
Sbjct: 6   RPLVTVQALDSDMATDASATVPIPDVMKSSIRPDIVNFVHSNISK 50


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