BLASTX nr result

ID: Glycyrrhiza23_contig00006553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006553
         (1171 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42213.1| unknown [Lotus japonicus]                              609   e-172
ref|NP_001237733.1| ribonucleotide reductase small subunit [Glyc...   596   e-168
ref|XP_002516790.1| ribonucleoside-diphosphate reductase small c...   580   e-163
ref|XP_002279943.1| PREDICTED: ribonucleoside-diphosphate reduct...   573   e-161
ref|XP_002311826.1| predicted protein [Populus trichocarpa] gi|2...   572   e-161

>gb|AFK42213.1| unknown [Lotus japonicus]
          Length = 351

 Score =  609 bits (1570), Expect = e-172
 Identities = 303/351 (86%), Positives = 321/351 (91%), Gaps = 9/351 (2%)
 Frame = -2

Query: 1062 MGSLENGAPK---------ARKGEEVEEEPILMKQNQRFCMFPIRHNQLWEMYKKAEASF 910
            MGSLENG  +         A+   E E+EPILM+Q QRFCMFPIR+ Q+WEMYKKA+ASF
Sbjct: 1    MGSLENGPARKETKQQLVPAQTEHEHEQEPILMEQTQRFCMFPIRYKQVWEMYKKAQASF 60

Query: 909  WTAEEVDLSYDVQHWATLSDSEKHFIKHVLAFFAASDGIVLENLAARFLNDVQIPEARAF 730
            WTAEEVDL+YDVQHWATLS+SEKHFI HVLAFFAASDGIVLENLAARFLNDVQIPEARAF
Sbjct: 61   WTAEEVDLTYDVQHWATLSNSEKHFITHVLAFFAASDGIVLENLAARFLNDVQIPEARAF 120

Query: 729  YGFQIAMENIHSEMYSLLLETLIKDSREKYRLFNAIENLPCVARKAEWALSWINSSTSFA 550
            YGFQIAMENIHSEMYSLLLETLIKDSREK+RLFNAIENLPCVARKAEWAL+WINSSTSFA
Sbjct: 121  YGFQIAMENIHSEMYSLLLETLIKDSREKHRLFNAIENLPCVARKAEWALNWINSSTSFA 180

Query: 549  ERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACXXXXXXXX 370
            ERLVAFAC+EGIFFSGSFC+IFWLKKRGLMPGLTFSNELISRDEGLHCDFAC        
Sbjct: 181  ERLVAFACIEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLQR 240

Query: 369  XLDSERVHNIVHEAVQIEIEFVCEALPCALIGMNSTLMSQYIKFVADRLLVALGCQKKYN 190
             LDSERVH+IVHEAV+IE EFVCEALPCALIGMNSTLMSQYIKFVADRLLV+LG QKKYN
Sbjct: 241  PLDSERVHHIVHEAVEIETEFVCEALPCALIGMNSTLMSQYIKFVADRLLVSLGYQKKYN 300

Query: 189  VENPFDWMEFISLQGKANFFERRVGDYQRASVMSSLQDDGKNFVFKLDEDF 37
            VENPFDWMEFISLQGKANFFERRVG+YQ+ASVMSSLQD GKNFVFKLDEDF
Sbjct: 301  VENPFDWMEFISLQGKANFFERRVGEYQKASVMSSLQDAGKNFVFKLDEDF 351


>ref|NP_001237733.1| ribonucleotide reductase small subunit [Glycine max]
            gi|4894211|gb|AAD32302.1| ribonucleotide reductase small
            subunit [Glycine max]
          Length = 339

 Score =  596 bits (1536), Expect = e-168
 Identities = 299/343 (87%), Positives = 315/343 (91%), Gaps = 1/343 (0%)
 Frame = -2

Query: 1062 MGSLEN-GAPKARKGEEVEEEPILMKQNQRFCMFPIRHNQLWEMYKKAEASFWTAEEVDL 886
            MGSLEN G  KAR     E+EPILM+Q+QRFCMFPIR+ Q+WEMYKKAEASFWTAEEVDL
Sbjct: 1    MGSLENNGVDKARD----EQEPILMEQSQRFCMFPIRYKQIWEMYKKAEASFWTAEEVDL 56

Query: 885  SYDVQHWATLSDSEKHFIKHVLAFFAASDGIVLENLAARFLNDVQIPEARAFYGFQIAME 706
            SYDVQHW TLS SEKHFI HVLAFFAASDGIVLENLAARFL+DVQIPEARAFYGFQIAME
Sbjct: 57   SYDVQHWETLSVSEKHFITHVLAFFAASDGIVLENLAARFLSDVQIPEARAFYGFQIAME 116

Query: 705  NIHSEMYSLLLETLIKDSREKYRLFNAIENLPCVARKAEWALSWINSSTSFAERLVAFAC 526
            NIHSEMYSLLLET IKDSREK++LFNAIENLPCVARKAEWALSWI+SSTSFAERLVAFAC
Sbjct: 117  NIHSEMYSLLLETYIKDSREKHKLFNAIENLPCVARKAEWALSWIHSSTSFAERLVAFAC 176

Query: 525  VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACXXXXXXXXXLDSERVH 346
            VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC         L S++VH
Sbjct: 177  VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKPLISDQVH 236

Query: 345  NIVHEAVQIEIEFVCEALPCALIGMNSTLMSQYIKFVADRLLVALGCQKKYNVENPFDWM 166
             +VHEAV+IE EFVC+ALPCALIGMNS LMSQYIKFVADRLLVALG Q+KYNVENPFDWM
Sbjct: 237  KLVHEAVEIETEFVCDALPCALIGMNSVLMSQYIKFVADRLLVALGYQRKYNVENPFDWM 296

Query: 165  EFISLQGKANFFERRVGDYQRASVMSSLQDDGKNFVFKLDEDF 37
            EFISLQGKANFFERRVGDYQ+ASVMSSLQD GKNFVFKLDEDF
Sbjct: 297  EFISLQGKANFFERRVGDYQKASVMSSLQDAGKNFVFKLDEDF 339


>ref|XP_002516790.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
            communis] gi|223543878|gb|EEF45404.1|
            ribonucleoside-diphosphate reductase small chain,
            putative [Ricinus communis]
          Length = 342

 Score =  580 bits (1496), Expect = e-163
 Identities = 287/342 (83%), Positives = 305/342 (89%)
 Frame = -2

Query: 1062 MGSLENGAPKARKGEEVEEEPILMKQNQRFCMFPIRHNQLWEMYKKAEASFWTAEEVDLS 883
            MGSL N   + R  E+ EEEPIL +QNQRFCMFPIR+  LWEMYKKAEASFWTAEEVDLS
Sbjct: 1    MGSLTNSKDEERAREDEEEEPILKEQNQRFCMFPIRYKSLWEMYKKAEASFWTAEEVDLS 60

Query: 882  YDVQHWATLSDSEKHFIKHVLAFFAASDGIVLENLAARFLNDVQIPEARAFYGFQIAMEN 703
             DVQ W TLS SEKHFI HVLAFFAASDGIVLENLAARFLND+Q+PEARAFYGFQIAMEN
Sbjct: 61   QDVQQWETLSVSEKHFISHVLAFFAASDGIVLENLAARFLNDIQVPEARAFYGFQIAMEN 120

Query: 702  IHSEMYSLLLETLIKDSREKYRLFNAIENLPCVARKAEWALSWINSSTSFAERLVAFACV 523
            IHSEMYSLLLET IKDSREK RLFNAIE +PCVARKA+WAL WI+SS+ +AERLVAFACV
Sbjct: 121  IHSEMYSLLLETYIKDSREKNRLFNAIETIPCVARKAKWALDWIHSSSLYAERLVAFACV 180

Query: 522  EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACXXXXXXXXXLDSERVHN 343
            EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC         L  ++V  
Sbjct: 181  EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLQWQKVQQ 240

Query: 342  IVHEAVQIEIEFVCEALPCALIGMNSTLMSQYIKFVADRLLVALGCQKKYNVENPFDWME 163
            IVHEAV+IE EFVC+ALPCALIGMNSTLMSQYIKFVADRLLVALG Q+KYNVENPFDWME
Sbjct: 241  IVHEAVEIETEFVCDALPCALIGMNSTLMSQYIKFVADRLLVALGYQRKYNVENPFDWME 300

Query: 162  FISLQGKANFFERRVGDYQRASVMSSLQDDGKNFVFKLDEDF 37
            FISLQGKANFFERRVGDYQ+ASVMSSLQD GKNFVFK+DEDF
Sbjct: 301  FISLQGKANFFERRVGDYQKASVMSSLQDGGKNFVFKMDEDF 342


>ref|XP_002279943.1| PREDICTED: ribonucleoside-diphosphate reductase small chain A [Vitis
            vinifera]
          Length = 340

 Score =  573 bits (1476), Expect = e-161
 Identities = 284/342 (83%), Positives = 309/342 (90%)
 Frame = -2

Query: 1062 MGSLENGAPKARKGEEVEEEPILMKQNQRFCMFPIRHNQLWEMYKKAEASFWTAEEVDLS 883
            MGSL NG  K R  EE EEEPILMK +QRFCMFPIR+ QLWEMYKKAEASFWTAEEVDLS
Sbjct: 1    MGSLTNGIDK-RPDEEQEEEPILMKNSQRFCMFPIRYRQLWEMYKKAEASFWTAEEVDLS 59

Query: 882  YDVQHWATLSDSEKHFIKHVLAFFAASDGIVLENLAARFLNDVQIPEARAFYGFQIAMEN 703
            +DVQ W +LS+SEKHFI HVLAFFAASDGIVLENLAARFL+D+QIPEARAFYGFQIAMEN
Sbjct: 60   HDVQQWESLSNSEKHFISHVLAFFAASDGIVLENLAARFLHDIQIPEARAFYGFQIAMEN 119

Query: 702  IHSEMYSLLLETLIKDSREKYRLFNAIENLPCVARKAEWALSWINSSTSFAERLVAFACV 523
            IHSEMYSLLLET IKDS+EK+RLFNAIE++ CVA KA+WAL WI SST FAERL+AFACV
Sbjct: 120  IHSEMYSLLLETYIKDSKEKHRLFNAIESISCVAGKAKWALDWIQSSTLFAERLIAFACV 179

Query: 522  EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACXXXXXXXXXLDSERVHN 343
            EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC         L  ++VH+
Sbjct: 180  EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPWQKVHH 239

Query: 342  IVHEAVQIEIEFVCEALPCALIGMNSTLMSQYIKFVADRLLVALGCQKKYNVENPFDWME 163
            IVHEAV+IE +FVCEALPCALIGMN+TLMSQYIKFVADRLLVALG ++KYNVENPFDWME
Sbjct: 240  IVHEAVEIETQFVCEALPCALIGMNATLMSQYIKFVADRLLVALGYERKYNVENPFDWME 299

Query: 162  FISLQGKANFFERRVGDYQRASVMSSLQDDGKNFVFKLDEDF 37
            FISLQGKANFFERRVGDYQ+AS+MSSL D GKN+VFK+DEDF
Sbjct: 300  FISLQGKANFFERRVGDYQKASIMSSL-DGGKNYVFKIDEDF 340


>ref|XP_002311826.1| predicted protein [Populus trichocarpa] gi|222851646|gb|EEE89193.1|
            predicted protein [Populus trichocarpa]
          Length = 342

 Score =  572 bits (1475), Expect = e-161
 Identities = 283/342 (82%), Positives = 303/342 (88%)
 Frame = -2

Query: 1062 MGSLENGAPKARKGEEVEEEPILMKQNQRFCMFPIRHNQLWEMYKKAEASFWTAEEVDLS 883
            MGSL NG    R  EE ++EPIL +QNQRFCMFPIR+ +LWEMYKKAEASFWTAEEVDLS
Sbjct: 1    MGSLRNGTESERIREEDKQEPILKEQNQRFCMFPIRYKELWEMYKKAEASFWTAEEVDLS 60

Query: 882  YDVQHWATLSDSEKHFIKHVLAFFAASDGIVLENLAARFLNDVQIPEARAFYGFQIAMEN 703
             D+Q W  LSDSEKHFI HVLAFFAASDGIVLENLAARFL DVQIPEARAFYGFQIAMEN
Sbjct: 61   RDMQQWEALSDSEKHFISHVLAFFAASDGIVLENLAARFLYDVQIPEARAFYGFQIAMEN 120

Query: 702  IHSEMYSLLLETLIKDSREKYRLFNAIENLPCVARKAEWALSWINSSTSFAERLVAFACV 523
            IHSEMYSLLLET IKDSREK+RLFNAIEN+PCVA KA+WAL WI SS  FAERLVAFAC+
Sbjct: 121  IHSEMYSLLLETYIKDSREKHRLFNAIENIPCVAEKAKWALDWIQSSMVFAERLVAFACI 180

Query: 522  EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACXXXXXXXXXLDSERVHN 343
            EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC         L  ++V++
Sbjct: 181  EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLQRQLHWQKVYH 240

Query: 342  IVHEAVQIEIEFVCEALPCALIGMNSTLMSQYIKFVADRLLVALGCQKKYNVENPFDWME 163
            IV EAV+IE +FVCEALPCALIGMN+TLM  YIKFVADRLLVALG QKKYNVENPFDWME
Sbjct: 241  IVGEAVEIETKFVCEALPCALIGMNATLMGDYIKFVADRLLVALGYQKKYNVENPFDWME 300

Query: 162  FISLQGKANFFERRVGDYQRASVMSSLQDDGKNFVFKLDEDF 37
            FISLQGKANFFERRVGDYQ+ASVMSSLQD GKN+VFK+DEDF
Sbjct: 301  FISLQGKANFFERRVGDYQKASVMSSLQDGGKNYVFKMDEDF 342


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