BLASTX nr result

ID: Glycyrrhiza23_contig00006539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006539
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236459.1| uncharacterized protein LOC100500331 [Glycin...   106   4e-21
emb|CBI17057.3| unnamed protein product [Vitis vinifera]              105   7e-21
gb|AAL91663.1| 60s acidic ribosomal protein [Prunus dulcis] gi|1...   103   2e-20
ref|XP_002266030.1| PREDICTED: 60S acidic ribosomal protein P2B ...   103   3e-20
ref|NP_001235654.1| uncharacterized protein LOC100499761 [Glycin...   102   4e-20

>ref|NP_001236459.1| uncharacterized protein LOC100500331 [Glycine max]
           gi|255630059|gb|ACU15383.1| unknown [Glycine max]
          Length = 114

 Score =  106 bits (264), Expect = 4e-21
 Identities = 62/114 (54%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
 Frame = +2

Query: 29  MKVIAAYLLAVLGGNTTPSADDIKEIFGAVGAEADDDRIESFLSEVSGKDIVEVIAAGRD 208
           MKV+AAYLLAVLGGN TPSADDIKEI G+VG EAD+DRIESFLSEV GKDIVE+IAAG++
Sbjct: 1   MKVVAAYLLAVLGGNNTPSADDIKEILGSVGIEADEDRIESFLSEVKGKDIVELIAAGKE 60

Query: 209 KL-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 367
           KL                                          DDDMGFSLFD
Sbjct: 61  KLASVPSGGGGAVAVAAAPGGGGGGAAPAAEVKKEEKVEEKEESDDDMGFSLFD 114


>emb|CBI17057.3| unnamed protein product [Vitis vinifera]
          Length = 145

 Score =  105 bits (262), Expect = 7e-21
 Identities = 59/114 (51%), Positives = 67/114 (58%)
 Frame = +2

Query: 26  KMKVIAAYLLAVLGGNTTPSADDIKEIFGAVGAEADDDRIESFLSEVSGKDIVEVIAAGR 205
           KMKVIAAYLLAVLGGNT PSA+D+K+I G+VGAEADDDRIE  L+EV GKDI E+IA+GR
Sbjct: 32  KMKVIAAYLLAVLGGNTCPSAEDLKDILGSVGAEADDDRIELLLAEVKGKDITELIASGR 91

Query: 206 DKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 367
           +KL                                         DDDMGFSLFD
Sbjct: 92  EKLASVPSGGGAAVAVAAPGGGGAAAPAAAEPKKEEKVEEKEESDDDMGFSLFD 145


>gb|AAL91663.1| 60s acidic ribosomal protein [Prunus dulcis]
           gi|111013714|gb|ABH03379.1| 60S acidic ribosomal protein
           [Prunus dulcis]
          Length = 113

 Score =  103 bits (258), Expect = 2e-20
 Identities = 57/113 (50%), Positives = 66/113 (58%)
 Frame = +2

Query: 29  MKVIAAYLLAVLGGNTTPSADDIKEIFGAVGAEADDDRIESFLSEVSGKDIVEVIAAGRD 208
           MKV+AAYLLAVLGGNTTPSA+D+K+I G+VGAE DDDRI+  LSEV GKDI E+IA+GR+
Sbjct: 1   MKVVAAYLLAVLGGNTTPSAEDLKDILGSVGAETDDDRIQLLLSEVKGKDITELIASGRE 60

Query: 209 KLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 367
           KL                                         DDDMGFSLFD
Sbjct: 61  KLASVPSGGGAVAVAAPGAGAGAAAPAAAEPKKEEKVEEKEDTDDDMGFSLFD 113


>ref|XP_002266030.1| PREDICTED: 60S acidic ribosomal protein P2B isoform 1 [Vitis
           vinifera] gi|147767214|emb|CAN73396.1| hypothetical
           protein VITISV_003816 [Vitis vinifera]
           gi|147782772|emb|CAN65595.1| hypothetical protein
           VITISV_030546 [Vitis vinifera]
          Length = 113

 Score =  103 bits (257), Expect = 3e-20
 Identities = 58/113 (51%), Positives = 66/113 (58%)
 Frame = +2

Query: 29  MKVIAAYLLAVLGGNTTPSADDIKEIFGAVGAEADDDRIESFLSEVSGKDIVEVIAAGRD 208
           MKVIAAYLLAVLGGNT PSA+D+K+I G+VGAEADDDRIE  L+EV GKDI E+IA+GR+
Sbjct: 1   MKVIAAYLLAVLGGNTCPSAEDLKDILGSVGAEADDDRIELLLAEVKGKDITELIASGRE 60

Query: 209 KLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 367
           KL                                         DDDMGFSLFD
Sbjct: 61  KLASVPSGGGAAVAVAAPGGGGAAAPAAAEPKKEEKVEEKEESDDDMGFSLFD 113


>ref|NP_001235654.1| uncharacterized protein LOC100499761 [Glycine max]
           gi|255626375|gb|ACU13532.1| unknown [Glycine max]
          Length = 114

 Score =  102 bits (255), Expect = 4e-20
 Identities = 61/114 (53%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
 Frame = +2

Query: 29  MKVIAAYLLAVLGGNTTPSADDIKEIFGAVGAEADDDRIESFLSEVSGKDIVEVIAAGRD 208
           MKV+AAYLLAVLGGN +PSAD IKEI G+VG EAD+DRIESFLSEV GKDIVE+IAAGR+
Sbjct: 1   MKVVAAYLLAVLGGNNSPSADVIKEILGSVGVEADEDRIESFLSEVKGKDIVELIAAGRE 60

Query: 209 KL-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 367
           KL                                          DDDMGFSLFD
Sbjct: 61  KLATVPSGGGGAVAVAAAPGGGAAAAAPAAEAKKEEKVEEKEESDDDMGFSLFD 114


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