BLASTX nr result

ID: Glycyrrhiza23_contig00006537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006537
         (1814 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593956.1| Zinc finger CCCH domain-containing protein [...   442   e-121
ref|XP_003529584.1| PREDICTED: zinc finger CCCH domain-containin...   428   e-117
ref|XP_003541660.1| PREDICTED: zinc finger CCCH domain-containin...   427   e-117
ref|XP_003547210.1| PREDICTED: zinc finger CCCH domain-containin...   425   e-116
ref|XP_003550189.1| PREDICTED: zinc finger CCCH domain-containin...   413   e-113

>ref|XP_003593956.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355483004|gb|AES64207.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 482

 Score =  442 bits (1138), Expect = e-121
 Identities = 218/336 (64%), Positives = 234/336 (69%), Gaps = 1/336 (0%)
 Frame = +3

Query: 3    CQYYMRTRSCKFGASCKYHHPRQAGGI-ASPVSLNYYGYPLRPGEKECSYYVKTGQCKFG 179
            CQYYMRTRSCKFGASCKYHHP+Q G   ASPVSLNYYGYPLRPGEKECSY+VKTGQCKFG
Sbjct: 99   CQYYMRTRSCKFGASCKYHHPKQTGATDASPVSLNYYGYPLRPGEKECSYFVKTGQCKFG 158

Query: 180  ATCKFDHPPPAGVQIXXXXXXXXXXXXXXXXXXQLYPTAQPPSGPSSQQIGVLVARPPLL 359
            ATCKFDHP PA VQI                   LYPT Q PSGPSSQQIGVLVARPPLL
Sbjct: 159  ATCKFDHPVPASVQIPAPSPVPPVSSLHVPVPSPLYPTVQTPSGPSSQQIGVLVARPPLL 218

Query: 360  PGSLVQGPYGPVVVSPTMVPISGWSTYQAPATSPVLPSSTPPNVGSAQLYGITQLPSSAT 539
             GS VQ PYGP+V+SPTMVP SGW  YQA ATSPVLPS +P NVGS QLYGITQLPS   
Sbjct: 219  HGSFVQSPYGPMVLSPTMVPFSGWGPYQATATSPVLPSGSPANVGSTQLYGITQLPSPGN 278

Query: 540  AYAGHYQXXXXXXXXXXXXQKEQAFPERPNQPDYQYYSKTGEFKFGPSYGYHQSPDTSAP 719
            AY G YQ            Q EQ+FP  PNQP+Y YYSK  E  F PSY YH+ PD SAP
Sbjct: 279  AYTGPYQLSGSSVGPSSRNQNEQSFPASPNQPEYHYYSKPEELPFAPSYRYHKPPDMSAP 338

Query: 720  RMNVVLSXXXXXXXXXXXXCTHYAQRGVCKFGPACRFDHXXXXXXXXXXXXXLAEMPVAP 899
            ++N VLS            CTHYAQRG+CKFGPAC+FDH             L ++PVAP
Sbjct: 339  KVNAVLSPAGLPLRPGAALCTHYAQRGICKFGPACKFDHPIAPLSYSPSASSLTDVPVAP 398

Query: 900  YHVSSSVGILAPSSSSSELQRELTTRSSTDSVPSRI 1007
            Y V SS+G L PSSSS ELQ ELT  SS +SVPSRI
Sbjct: 399  YFVGSSIGTLVPSSSSPELQPELTAGSSRESVPSRI 434



 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
 Frame = +3

Query: 612 FPERPNQPDYQYYSKTGEFKFGPSYGYHQSPDTSAPRMN-VVLSXXXXXXXXXXXXCTHY 788
           +PER  QP  QYY +T   KFG S  YH    T A   + V L+            C+++
Sbjct: 90  YPERVGQPVCQYYMRTRSCKFGASCKYHHPKQTGATDASPVSLNYYGYPLRPGEKECSYF 149

Query: 789 AQRGVCKFGPACRFDH 836
            + G CKFG  C+FDH
Sbjct: 150 VKTGQCKFGATCKFDH 165


>ref|XP_003529584.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
            [Glycine max]
          Length = 484

 Score =  428 bits (1100), Expect = e-117
 Identities = 210/335 (62%), Positives = 231/335 (68%)
 Frame = +3

Query: 3    CQYYMRTRSCKFGASCKYHHPRQAGGIASPVSLNYYGYPLRPGEKECSYYVKTGQCKFGA 182
            CQYYMRT SCKFGASCKYHHPRQ  G A+PV LNYYGYPLR G+KECSYYVKTGQCKFGA
Sbjct: 99   CQYYMRTGSCKFGASCKYHHPRQVPGTATPVPLNYYGYPLRVGQKECSYYVKTGQCKFGA 158

Query: 183  TCKFDHPPPAGVQIXXXXXXXXXXXXXXXXXXQLYPTAQPPSGPSSQQIGVLVARPPLLP 362
            TCKF HP PAGVQ+                   +YPT  PPSGPS QQ GVLVARPP+LP
Sbjct: 159  TCKFHHPQPAGVQVLAPSPVPPVSPLPVPVPSPMYPTVHPPSGPSQQQYGVLVARPPMLP 218

Query: 363  GSLVQGPYGPVVVSPTMVPISGWSTYQAPATSPVLPSSTPPNVGSAQLYGITQLPSSATA 542
            GS+VQGPYGP+VVSPTMVP SGWS YQAPAT+P+LPSST  NVGS QLYGITQLPSSA  
Sbjct: 219  GSVVQGPYGPMVVSPTMVPFSGWSPYQAPATNPLLPSSTTSNVGSTQLYGITQLPSSAAT 278

Query: 543  YAGHYQXXXXXXXXXXXXQKEQAFPERPNQPDYQYYSKTGEFKFGPSYGYHQSPDTSAPR 722
            Y G YQ            QKE  FPERP+QP+  +Y KTG+ KFGP   YH  PD SAP+
Sbjct: 279  YTGPYQPSGSSIGPSGASQKEHPFPERPDQPECHHYMKTGDCKFGPLCRYHHPPDKSAPK 338

Query: 723  MNVVLSXXXXXXXXXXXXCTHYAQRGVCKFGPACRFDHXXXXXXXXXXXXXLAEMPVAPY 902
             NV LS            CTHY QRGVCKFG AC+FDH             LA+MPVAPY
Sbjct: 339  ANVTLSPVGLPLRPGAPPCTHYTQRGVCKFGSACKFDHPMGSLSYSPSASSLADMPVAPY 398

Query: 903  HVSSSVGILAPSSSSSELQRELTTRSSTDSVPSRI 1007
             V SS+G LA SS SSEL+ EL   S+ +SV SR+
Sbjct: 399  PVGSSIGTLALSSLSSELRPELGAGSNKESVASRM 433



 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 33/78 (42%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
 Frame = +3

Query: 612 FPERPNQPDYQYYSKTGEFKFGPSYGYH---QSPDTSAPRMNVVLSXXXXXXXXXXXXCT 782
           FPER  QP  QYY +TG  KFG S  YH   Q P T+ P   V L+            C+
Sbjct: 90  FPERVGQPVCQYYMRTGSCKFGASCKYHHPRQVPGTATP---VPLNYYGYPLRVGQKECS 146

Query: 783 HYAQRGVCKFGPACRFDH 836
           +Y + G CKFG  C+F H
Sbjct: 147 YYVKTGQCKFGATCKFHH 164


>ref|XP_003541660.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
            [Glycine max]
          Length = 491

 Score =  427 bits (1097), Expect = e-117
 Identities = 218/343 (63%), Positives = 238/343 (69%), Gaps = 8/343 (2%)
 Frame = +3

Query: 3    CQYYMRTRSCKFGASCKYHHPRQAGG---IASPVSLNYYGYPLRPGEKECSYYVKTGQCK 173
            CQY+MRTR+CKFG+SCKYHHPRQAG     A+PVSLNYYGYPLR GEKECSYYVKTGQCK
Sbjct: 100  CQYFMRTRTCKFGSSCKYHHPRQAGAGGAAATPVSLNYYGYPLRQGEKECSYYVKTGQCK 159

Query: 174  FGATCKFDHPPPAGVQIXXXXXXXXXXXXXXXXXXQLYPTAQPPSGPSSQQIGVLVARPP 353
            FGATCKF HP PAG+QI                   LY T QPP GPSSQQIGVLVARPP
Sbjct: 160  FGATCKFHHPVPAGIQIPPSPFAPVSPLPVPVPSP-LYSTMQPPPGPSSQQIGVLVARPP 218

Query: 354  LLPGSLVQGPYGPVVVSPTMVPISGWSTYQAPATSPVLPSSTPPNVGSAQLYGITQLPSS 533
            +LPGSLVQ PYGPVV+SP MVPISGW  YQA A+  VLPS TP NVGSAQLYGITQLPS 
Sbjct: 219  MLPGSLVQSPYGPVVLSPAMVPISGWGPYQASASGAVLPSGTPSNVGSAQLYGITQLPSP 278

Query: 534  ATAYAGHYQXXXXXXXXXXXXQKEQAFPERPNQPDYQYYSKTGEFKFGPSYGYHQSPDTS 713
            A AY G Y             QKEQAFPER NQP+YQYY KTGE KFGPSY Y+  PD S
Sbjct: 279  AAAYPGPYPPSGSPVGPPSSSQKEQAFPERSNQPEYQYYLKTGEVKFGPSYRYNPPPDMS 338

Query: 714  APRM-----NVVLSXXXXXXXXXXXXCTHYAQRGVCKFGPACRFDHXXXXXXXXXXXXXL 878
             P M     NV+LS            CTHYAQ GVCKFG AC+FDH             L
Sbjct: 339  VPDMSTPKANVILSPAGLPLRPGAPACTHYAQHGVCKFGSACKFDHPMGSMSYSPSASSL 398

Query: 879  AEMPVAPYHVSSSVGILAPSSSSSELQRELTTRSSTDSVPSRI 1007
            A+MPVAPY V S++  LAPSSSSSEL+ E ++ SS +SVPSR+
Sbjct: 399  ADMPVAPYPVGSTIATLAPSSSSSELRPEPSSGSSKESVPSRM 441


>ref|XP_003547210.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
            [Glycine max]
          Length = 481

 Score =  425 bits (1093), Expect = e-116
 Identities = 218/337 (64%), Positives = 237/337 (70%), Gaps = 2/337 (0%)
 Frame = +3

Query: 3    CQYYMRTRSCKFGASCKYHHPRQAGGIAS-PVSLNYYGYPLRPGEKECSYYVKTGQCKFG 179
            CQYYMRTR+CKFG+SCKYHHPRQAGG A+ P+SL+YYGYPLRPGEKECSYYVKTGQCKFG
Sbjct: 99   CQYYMRTRTCKFGSSCKYHHPRQAGGTAATPMSLSYYGYPLRPGEKECSYYVKTGQCKFG 158

Query: 180  ATCKFDHPPPAGVQIXXXXXXXXXXXXXXXXXXQLYPTAQPPSGPSSQQIGVLVARPPLL 359
            ATCKF HP PAGVQI                   LY T QPP GPSSQQIGVLVARPP+L
Sbjct: 159  ATCKFHHPVPAGVQIPAPSPVAPSPLPVPVPSP-LYSTMQPPPGPSSQQIGVLVARPPML 217

Query: 360  PGSLVQGPYGPVVVSPTMVPISGWSTYQAPATSPVLPSSTPPNVGSAQLYGITQLPSSAT 539
            PGSLVQ PYGPVV+SP MVPISGW  YQ  A   V PS TP NVGS QLYGITQLPS   
Sbjct: 218  PGSLVQSPYGPVVLSPAMVPISGWGPYQVGA---VHPSGTPSNVGSPQLYGITQLPSPVA 274

Query: 540  AYAGHYQXXXXXXXXXXXXQKEQAFPERPNQPDYQYYSKTGEFKFGPSYGYHQSPDTSAP 719
            AY G YQ            QKEQAFPER NQP+YQYY KTGE KFGPSY Y+  PD SAP
Sbjct: 275  AYPGPYQPSGSPVGPSSSSQKEQAFPERSNQPEYQYYPKTGEVKFGPSYRYNPPPDMSAP 334

Query: 720  RMNVVLS-XXXXXXXXXXXXCTHYAQRGVCKFGPACRFDHXXXXXXXXXXXXXLAEMPVA 896
            + NV+LS             C HYAQ GVCKFG AC+FDH             LA+MPVA
Sbjct: 335  KANVILSPAGLPLRPGAAPACIHYAQHGVCKFGSACKFDHHMGSLSYSPSASSLADMPVA 394

Query: 897  PYHVSSSVGILAPSSSSSELQRELTTRSSTDSVPSRI 1007
            PY V S++  LAPSSSSSEL+ ELT+ SS +SVPSR+
Sbjct: 395  PYPVGSTISTLAPSSSSSELRPELTSGSSKESVPSRM 431


>ref|XP_003550189.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
            [Glycine max]
          Length = 484

 Score =  413 bits (1061), Expect = e-113
 Identities = 204/335 (60%), Positives = 224/335 (66%)
 Frame = +3

Query: 3    CQYYMRTRSCKFGASCKYHHPRQAGGIASPVSLNYYGYPLRPGEKECSYYVKTGQCKFGA 182
            CQY+MRT  CKFG SCKYHHPRQA G A+PV LNYYGYPLR  EKECSYYVKTGQCKFGA
Sbjct: 99   CQYFMRTGLCKFGVSCKYHHPRQAAGTATPVPLNYYGYPLRVAEKECSYYVKTGQCKFGA 158

Query: 183  TCKFDHPPPAGVQIXXXXXXXXXXXXXXXXXXQLYPTAQPPSGPSSQQIGVLVARPPLLP 362
            TCKF HP PAGVQ                    +YPT Q PSGPS QQ GVLVARPP+LP
Sbjct: 159  TCKFHHPQPAGVQALAPSPVPPVSPLPVPVPSPMYPTVQIPSGPSQQQYGVLVARPPMLP 218

Query: 363  GSLVQGPYGPVVVSPTMVPISGWSTYQAPATSPVLPSSTPPNVGSAQLYGITQLPSSATA 542
            GS+VQGPYGP+VVSP MVP SGWS YQAPAT+PVLPSS   N GS Q YGI+QLPSS   
Sbjct: 219  GSVVQGPYGPMVVSPAMVPFSGWSPYQAPATNPVLPSSNTSNAGSTQFYGISQLPSSPAT 278

Query: 543  YAGHYQXXXXXXXXXXXXQKEQAFPERPNQPDYQYYSKTGEFKFGPSYGYHQSPDTSAPR 722
            + G YQ            QKE  FPERP+QP+  +Y KTGE KFG S  YH  PD SAP+
Sbjct: 279  FTGPYQPSGSSIGPSGASQKEHPFPERPDQPECHHYMKTGECKFGLSCRYHHPPDKSAPK 338

Query: 723  MNVVLSXXXXXXXXXXXXCTHYAQRGVCKFGPACRFDHXXXXXXXXXXXXXLAEMPVAPY 902
              V LS            CTHY QRGVCKFG AC+FDH             LA+MPVAPY
Sbjct: 339  ATVTLSPVGLPLRPGAPPCTHYTQRGVCKFGSACKFDHPMGSLSYSPSASSLADMPVAPY 398

Query: 903  HVSSSVGILAPSSSSSELQRELTTRSSTDSVPSRI 1007
             V SS+G LAPSSSSSEL+ EL   S+ +SV SR+
Sbjct: 399  PVGSSIGTLAPSSSSSELRPELGAGSNKESVASRM 433



 Score = 58.5 bits (140), Expect = 6e-06
 Identities = 28/75 (37%), Positives = 36/75 (48%)
 Frame = +3

Query: 612 FPERPNQPDYQYYSKTGEFKFGPSYGYHQSPDTSAPRMNVVLSXXXXXXXXXXXXCTHYA 791
           FPER  QP  QY+ +TG  KFG S  YH     +     V L+            C++Y 
Sbjct: 90  FPERVGQPVCQYFMRTGLCKFGVSCKYHHPRQAAGTATPVPLNYYGYPLRVAEKECSYYV 149

Query: 792 QRGVCKFGPACRFDH 836
           + G CKFG  C+F H
Sbjct: 150 KTGQCKFGATCKFHH 164


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