BLASTX nr result

ID: Glycyrrhiza23_contig00006536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006536
         (2472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529584.1| PREDICTED: zinc finger CCCH domain-containin...   647   0.0  
ref|XP_003550189.1| PREDICTED: zinc finger CCCH domain-containin...   632   e-178
ref|XP_003541660.1| PREDICTED: zinc finger CCCH domain-containin...   544   e-152
ref|XP_002516892.1| nucleic acid binding protein, putative [Rici...   535   e-149
ref|XP_003547210.1| PREDICTED: zinc finger CCCH domain-containin...   533   e-149

>ref|XP_003529584.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
            [Glycine max]
          Length = 484

 Score =  647 bits (1669), Expect = 0.0
 Identities = 312/410 (76%), Positives = 327/410 (79%), Gaps = 6/410 (1%)
 Frame = +3

Query: 156  MERYGRASEGSQSDLSPEWTVGAG-ETGLEGNESVWQLGLVGGDSYPLRPDEADCIYYLR 332
            MERYGRASEGSQSD SPEWTV A  + GLE  ES WQLGL G +SYP+RPDEADCIYYLR
Sbjct: 1    MERYGRASEGSQSDPSPEWTVAADVDAGLE--ESSWQLGLPGAESYPMRPDEADCIYYLR 58

Query: 333  TGFCGYGSRCRFNHPRDRGAVIGAA-RTVGELPERAGQPVCQYYMRMGSCKFGASCKYHH 509
            TGFCGYG+RCRFNHPRDR AVIGAA RT GE PER GQPVCQYYMR GSCKFGASCKYHH
Sbjct: 59   TGFCGYGTRCRFNHPRDRAAVIGAAPRTGGEFPERVGQPVCQYYMRTGSCKFGASCKYHH 118

Query: 510  PRQAAGATTPVSLNYYGYPLRVGEKECSYYVKTGQCKFGATCKFHHPQPAGVQVLAXXXX 689
            PRQ  G  TPV LNYYGYPLRVG+KECSYYVKTGQCKFGATCKFHHPQPAGVQVLA    
Sbjct: 119  PRQVPGTATPVPLNYYGYPLRVGQKECSYYVKTGQCKFGATCKFHHPQPAGVQVLAPSPV 178

Query: 690  XXXXXXXXX----MYPTVXXXXXXXXXXXYGVLVARPPLLPGSLVQGPYGPMVVSPTMVP 857
                         MYPTV           YGVLVARPP+LPGS+VQGPYGPMVVSPTMVP
Sbjct: 179  PPVSPLPVPVPSPMYPTVHPPSGPSQQQ-YGVLVARPPMLPGSVVQGPYGPMVVSPTMVP 237

Query: 858  FSGWSPYQAPATSPVLPSSAPPNIGLTQLYGITQLPSSATAYTGPYQXXXXXXXXXXXXQ 1037
            FSGWSPYQAPAT+P+LPSS   N+G TQLYGITQLPSSA  YTGPYQ            Q
Sbjct: 238  FSGWSPYQAPATNPLLPSSTTSNVGSTQLYGITQLPSSAATYTGPYQPSGSSIGPSGASQ 297

Query: 1038 KEHSYPERPDQPECHYYMKTGECKFGPSCKYHHPPDISAPKANVILSPVGLPLRPGAPPC 1217
            KEH +PERPDQPECH+YMKTG+CKFGP C+YHHPPD SAPKANV LSPVGLPLRPGAPPC
Sbjct: 298  KEHPFPERPDQPECHHYMKTGDCKFGPLCRYHHPPDKSAPKANVTLSPVGLPLRPGAPPC 357

Query: 1218 THYTQRGVCKFGSSCKFDHPMGXXXXXXXXXXXXDMPVAPYPVGSSIGTL 1367
            THYTQRGVCKFGS+CKFDHPMG            DMPVAPYPVGSSIGTL
Sbjct: 358  THYTQRGVCKFGSACKFDHPMGSLSYSPSASSLADMPVAPYPVGSSIGTL 407


>ref|XP_003550189.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
            [Glycine max]
          Length = 484

 Score =  632 bits (1631), Expect = e-178
 Identities = 306/410 (74%), Positives = 321/410 (78%), Gaps = 6/410 (1%)
 Frame = +3

Query: 156  MERYGRASEGSQSDLSPEWTVGAG-ETGLEGNESVWQLGLVGGDSYPLRPDEADCIYYLR 332
            MERYGRASEGSQSD SPEWT+ AG + GLE  ES WQLGL G +SYP+RPDEADCIYYLR
Sbjct: 1    MERYGRASEGSQSDPSPEWTLAAGADAGLE--ESSWQLGLAGAESYPMRPDEADCIYYLR 58

Query: 333  TGFCGYGSRCRFNHPRDRGAVIGAA-RTVGELPERAGQPVCQYYMRMGSCKFGASCKYHH 509
            TGFCGYG+RCRFNHPRDR AVIGAA RT GE PER GQPVCQY+MR G CKFG SCKYHH
Sbjct: 59   TGFCGYGTRCRFNHPRDRAAVIGAAARTGGEFPERVGQPVCQYFMRTGLCKFGVSCKYHH 118

Query: 510  PRQAAGATTPVSLNYYGYPLRVGEKECSYYVKTGQCKFGATCKFHHPQPAGVQVLAXXXX 689
            PRQAAG  TPV LNYYGYPLRV EKECSYYVKTGQCKFGATCKFHHPQPAGVQ LA    
Sbjct: 119  PRQAAGTATPVPLNYYGYPLRVAEKECSYYVKTGQCKFGATCKFHHPQPAGVQALAPSPV 178

Query: 690  XXXXXXXXX----MYPTVXXXXXXXXXXXYGVLVARPPLLPGSLVQGPYGPMVVSPTMVP 857
                         MYPTV           YGVLVARPP+LPGS+VQGPYGPMVVSP MVP
Sbjct: 179  PPVSPLPVPVPSPMYPTVQIPSGPSQQQ-YGVLVARPPMLPGSVVQGPYGPMVVSPAMVP 237

Query: 858  FSGWSPYQAPATSPVLPSSAPPNIGLTQLYGITQLPSSATAYTGPYQXXXXXXXXXXXXQ 1037
            FSGWSPYQAPAT+PVLPSS   N G TQ YGI+QLPSS   +TGPYQ            Q
Sbjct: 238  FSGWSPYQAPATNPVLPSSNTSNAGSTQFYGISQLPSSPATFTGPYQPSGSSIGPSGASQ 297

Query: 1038 KEHSYPERPDQPECHYYMKTGECKFGPSCKYHHPPDISAPKANVILSPVGLPLRPGAPPC 1217
            KEH +PERPDQPECH+YMKTGECKFG SC+YHHPPD SAPKA V LSPVGLPLRPGAPPC
Sbjct: 298  KEHPFPERPDQPECHHYMKTGECKFGLSCRYHHPPDKSAPKATVTLSPVGLPLRPGAPPC 357

Query: 1218 THYTQRGVCKFGSSCKFDHPMGXXXXXXXXXXXXDMPVAPYPVGSSIGTL 1367
            THYTQRGVCKFGS+CKFDHPMG            DMPVAPYPVGSSIGTL
Sbjct: 358  THYTQRGVCKFGSACKFDHPMGSLSYSPSASSLADMPVAPYPVGSSIGTL 407


>ref|XP_003541660.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
            [Glycine max]
          Length = 491

 Score =  544 bits (1401), Expect = e-152
 Identities = 267/417 (64%), Positives = 294/417 (70%), Gaps = 13/417 (3%)
 Frame = +3

Query: 156  MERYGRASEGSQSDLSPEWTVGAGETGLEGNESVWQLGLVGG---DSYPLRPDEADCIYY 326
            ME+YGR+SEGS+SD SPEW     +TGLE  E VWQLG+ GG   +SYP RPDE DC YY
Sbjct: 1    MEQYGRSSEGSRSDPSPEWAEPEAQTGLE--EPVWQLGMGGGAGEESYPQRPDEVDCTYY 58

Query: 327  LRTGFCGYGSRCRFNHPRDRGAVIGAARTVGELPERAGQPVCQYYMRMGSCKFGASCKYH 506
            LRTGFCG+GSRCRFNHPRDR  V GA RT GE PER GQPVCQY+MR  +CKFG+SCKYH
Sbjct: 59   LRTGFCGFGSRCRFNHPRDRAVVAGAERTAGEHPERVGQPVCQYFMRTRTCKFGSSCKYH 118

Query: 507  HPRQAAG---ATTPVSLNYYGYPLRVGEKECSYYVKTGQCKFGATCKFHHPQPAGVQVLA 677
            HPRQA     A TPVSLNYYGYPLR GEKECSYYVKTGQCKFGATCKFHHP PAG+Q+  
Sbjct: 119  HPRQAGAGGAAATPVSLNYYGYPLRQGEKECSYYVKTGQCKFGATCKFHHPVPAGIQIPP 178

Query: 678  XXXXXXXXXXXXXMYP--TVXXXXXXXXXXXYGVLVARPPLLPGSLVQGPYGPMVVSPTM 851
                           P  +             GVLVARPP+LPGSLVQ PYGP+V+SP M
Sbjct: 179  SPFAPVSPLPVPVPSPLYSTMQPPPGPSSQQIGVLVARPPMLPGSLVQSPYGPVVLSPAM 238

Query: 852  VPFSGWSPYQAPATSPVLPSSAPPNIGLTQLYGITQLPSSATAYTGPYQXXXXXXXXXXX 1031
            VP SGW PYQA A+  VLPS  P N+G  QLYGITQLPS A AY GPY            
Sbjct: 239  VPISGWGPYQASASGAVLPSGTPSNVGSAQLYGITQLPSPAAAYPGPYPPSGSPVGPPSS 298

Query: 1032 XQKEHSYPERPDQPECHYYMKTGECKFGPSCKYHHP-----PDISAPKANVILSPVGLPL 1196
             QKE ++PER +QPE  YY+KTGE KFGPS +Y+ P     PD+S PKANVILSP GLPL
Sbjct: 299  SQKEQAFPERSNQPEYQYYLKTGEVKFGPSYRYNPPPDMSVPDMSTPKANVILSPAGLPL 358

Query: 1197 RPGAPPCTHYTQRGVCKFGSSCKFDHPMGXXXXXXXXXXXXDMPVAPYPVGSSIGTL 1367
            RPGAP CTHY Q GVCKFGS+CKFDHPMG            DMPVAPYPVGS+I TL
Sbjct: 359  RPGAPACTHYAQHGVCKFGSACKFDHPMGSMSYSPSASSLADMPVAPYPVGSTIATL 415


>ref|XP_002516892.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223543980|gb|EEF45506.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 481

 Score =  535 bits (1378), Expect = e-149
 Identities = 267/412 (64%), Positives = 294/412 (71%), Gaps = 8/412 (1%)
 Frame = +3

Query: 156  MERYGRASEGSQSDLSPEWTVGAGETGLEGNESVWQLGLVGGD-SYPLRPDEADCIYYLR 332
            M+RYGR  EGSQSD SPEWT    ET LE  E  WQLGL   +  YP RP+EADCIYYLR
Sbjct: 1    MDRYGRTQEGSQSDPSPEWTGPGPETVLE--EGDWQLGLGEVEPGYPERPEEADCIYYLR 58

Query: 333  TGFCGYGSRCRFNHPRDRGAVIGAART-VGELPERAGQPVCQYYMRMGSCKFGASCKYHH 509
            TGFCGYGSRCRFNHPRDRGAV+GAAR    E PER GQPVCQYYMR G+CKFGASCKYHH
Sbjct: 59   TGFCGYGSRCRFNHPRDRGAVLGAARAGAAEFPERVGQPVCQYYMRTGTCKFGASCKYHH 118

Query: 510  PRQAAGATTPVSLNYYGYPLRVGEKECSYYVKTGQCKFGATCKFHHPQPAGVQVLAXXXX 689
            P+Q  G+  PVSLNYYGYPLR GEKEC+YYVKTGQCKFG TCKFHHPQPA +Q+ A    
Sbjct: 119  PKQGGGSANPVSLNYYGYPLRPGEKECTYYVKTGQCKFGVTCKFHHPQPANLQIQAQSPA 178

Query: 690  XXXXXXXXX-----MYPTVXXXXXXXXXXXYGVLVARPPLLPGSLVQGPYGPMVVSPTMV 854
                          +YP V           YG++VARPPLLPGS VQGPYGPM+VSP +V
Sbjct: 179  LQVAPVPAPVPASALYPNVQSPSVPSTQQ-YGLVVARPPLLPGSYVQGPYGPMLVSPGVV 237

Query: 855  PFSGWSPYQAPATSPVLPSSAPPNIGLTQLYGITQLPSSATAYTGPYQXXXXXXXXXXXX 1034
            P+  WSPY  P  SPV   S    +G + +YGITQL  SA AYTG YQ            
Sbjct: 238  PYPSWSPYPGPI-SPVASPSTQLGVG-SGVYGITQLSPSAPAYTGGYQAMPSSSN----- 290

Query: 1035 QKEH-SYPERPDQPECHYYMKTGECKFGPSCKYHHPPDISAPKANVILSPVGLPLRPGAP 1211
            QKE  S+PERP QPEC YYMKTG+CKFG SCKYHHPP++ APK NV+LSP+GLPLRPGAP
Sbjct: 291  QKEQPSFPERPGQPECQYYMKTGDCKFGSSCKYHHPPELIAPKTNVVLSPMGLPLRPGAP 350

Query: 1212 PCTHYTQRGVCKFGSSCKFDHPMGXXXXXXXXXXXXDMPVAPYPVGSSIGTL 1367
             CTHYTQRG CKFG +CKFDHPMG            DMPVAPYPVGSS+GTL
Sbjct: 351  HCTHYTQRGQCKFGPACKFDHPMGSLSYSPSASSLSDMPVAPYPVGSSMGTL 402


>ref|XP_003547210.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
            [Glycine max]
          Length = 481

 Score =  533 bits (1373), Expect = e-149
 Identities = 265/410 (64%), Positives = 291/410 (70%), Gaps = 6/410 (1%)
 Frame = +3

Query: 156  MERYGRASEGSQSDLSPEWTVGAGETGLEGNESVWQLGL--VGGDSYPLRPDEADCIYYL 329
            ME+YGR+SEGS+SD SPEW     +TGLE  E +WQLG+   G +SYP RPDE DC YYL
Sbjct: 1    MEQYGRSSEGSRSDPSPEWAGPEAQTGLE--EPMWQLGMGGAGEESYPQRPDEVDCTYYL 58

Query: 330  RTGFCGYGSRCRFNHPRDRGAVIGAARTVGELPERAGQPVCQYYMRMGSCKFGASCKYHH 509
            RTGFCG+GSRCRFNHPRDR AV GA RT GE PER GQPVCQYYMR  +CKFG+SCKYHH
Sbjct: 59   RTGFCGFGSRCRFNHPRDRAAVAGAERTTGEYPERVGQPVCQYYMRTRTCKFGSSCKYHH 118

Query: 510  PRQAAG-ATTPVSLNYYGYPLRVGEKECSYYVKTGQCKFGATCKFHHPQPAGVQVLAXXX 686
            PRQA G A TP+SL+YYGYPLR GEKECSYYVKTGQCKFGATCKFHHP PAGVQ+ A   
Sbjct: 119  PRQAGGTAATPMSLSYYGYPLRPGEKECSYYVKTGQCKFGATCKFHHPVPAGVQIPAPSP 178

Query: 687  XXXXXXXXXXMYP--TVXXXXXXXXXXXYGVLVARPPLLPGSLVQGPYGPMVVSPTMVPF 860
                        P  +             GVLVARPP+LPGSLVQ PYGP+V+SP MVP 
Sbjct: 179  VAPSPLPVPVPSPLYSTMQPPPGPSSQQIGVLVARPPMLPGSLVQSPYGPVVLSPAMVPI 238

Query: 861  SGWSPYQAPATSPVLPSSAPPNIGLTQLYGITQLPSSATAYTGPYQXXXXXXXXXXXXQK 1040
            SGW PYQ  A   V PS  P N+G  QLYGITQLPS   AY GPYQ            QK
Sbjct: 239  SGWGPYQVGA---VHPSGTPSNVGSPQLYGITQLPSPVAAYPGPYQPSGSPVGPSSSSQK 295

Query: 1041 EHSYPERPDQPECHYYMKTGECKFGPSCKYHHPPDISAPKANVILSPVGLPLRPG-APPC 1217
            E ++PER +QPE  YY KTGE KFGPS +Y+ PPD+SAPKANVILSP GLPLRPG AP C
Sbjct: 296  EQAFPERSNQPEYQYYPKTGEVKFGPSYRYNPPPDMSAPKANVILSPAGLPLRPGAAPAC 355

Query: 1218 THYTQRGVCKFGSSCKFDHPMGXXXXXXXXXXXXDMPVAPYPVGSSIGTL 1367
             HY Q GVCKFGS+CKFDH MG            DMPVAPYPVGS+I TL
Sbjct: 356  IHYAQHGVCKFGSACKFDHHMGSLSYSPSASSLADMPVAPYPVGSTISTL 405


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