BLASTX nr result
ID: Glycyrrhiza23_contig00006518
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00006518 (459 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK41814.1| unknown [Lotus japonicus] 117 1e-24 gb|ACJ86307.1| unknown [Medicago truncatula] 111 5e-23 ref|XP_003531118.1| PREDICTED: tRNA-dihydrouridine synthase A-li... 107 1e-21 ref|XP_003524829.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-dihydro... 106 2e-21 ref|XP_002517816.1| tRNA-dihydrouridine synthase A, putative [Ri... 100 9e-20 >gb|AFK41814.1| unknown [Lotus japonicus] Length = 425 Score = 117 bits (293), Expect = 1e-24 Identities = 57/69 (82%), Positives = 62/69 (89%), Gaps = 1/69 (1%) Frame = -2 Query: 458 LWKRKADAAFRNCMTIESFFEETLVAIPDPVLDSPVSEPAPGRRDLFANINSLLPPPYKT 279 LWKRKADAAFR+C TI+SFFEETLVAIPD VLDSPV EP PGRRDLFAN++SLLPPPY T Sbjct: 357 LWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPVVEPTPGRRDLFANMDSLLPPPYTT 416 Query: 278 REE-VAVCA 255 REE V +CA Sbjct: 417 REEAVIICA 425 >gb|ACJ86307.1| unknown [Medicago truncatula] Length = 432 Score = 111 bits (278), Expect = 5e-23 Identities = 53/67 (79%), Positives = 58/67 (86%) Frame = -2 Query: 455 WKRKADAAFRNCMTIESFFEETLVAIPDPVLDSPVSEPAPGRRDLFANINSLLPPPYKTR 276 WKR ADAAFRNC TI+SFFEET+ AIPD VLDSPVSEP GR DLFANI+SLLPP Y+TR Sbjct: 366 WKRNADAAFRNCTTIKSFFEETIDAIPDSVLDSPVSEPPLGRTDLFANIDSLLPPRYETR 425 Query: 275 EEVAVCA 255 EEV +CA Sbjct: 426 EEVVICA 432 >ref|XP_003531118.1| PREDICTED: tRNA-dihydrouridine synthase A-like [Glycine max] Length = 430 Score = 107 bits (267), Expect = 1e-21 Identities = 53/69 (76%), Positives = 61/69 (88%), Gaps = 1/69 (1%) Frame = -2 Query: 458 LWKRKADAAFRNCMTIESFFEETLVAIPDPVLDSPVSEPAPGRRDLFANINSLLPPPYKT 279 LWKRKADAAF+NC T+ESFFEETLVAIPD VLDSPV+EP PG RDLFAN+++LLP PY+T Sbjct: 363 LWKRKADAAFKNCTTMESFFEETLVAIPDSVLDSPVAEPPPG-RDLFANMHNLLPAPYRT 421 Query: 278 RE-EVAVCA 255 RE V +CA Sbjct: 422 REATVIICA 430 >ref|XP_003524829.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-dihydrouridine synthase A-like [Glycine max] Length = 437 Score = 106 bits (265), Expect = 2e-21 Identities = 53/69 (76%), Positives = 61/69 (88%), Gaps = 1/69 (1%) Frame = -2 Query: 458 LWKRKADAAFRNCMTIESFFEETLVAIPDPVLDSPVSEPAPGRRDLFANINSLLPPPYKT 279 LWKRKADAAF+NC TIESFFEETLVAIPD VLDS V+E PG RDLFAN+++LLPPPY+T Sbjct: 370 LWKRKADAAFKNCTTIESFFEETLVAIPDSVLDSLVAESPPG-RDLFANMHNLLPPPYRT 428 Query: 278 REE-VAVCA 255 REE + +CA Sbjct: 429 REEAIIICA 437 >ref|XP_002517816.1| tRNA-dihydrouridine synthase A, putative [Ricinus communis] gi|223543088|gb|EEF44623.1| tRNA-dihydrouridine synthase A, putative [Ricinus communis] Length = 375 Score = 100 bits (250), Expect = 9e-20 Identities = 45/63 (71%), Positives = 54/63 (85%) Frame = -2 Query: 458 LWKRKADAAFRNCMTIESFFEETLVAIPDPVLDSPVSEPAPGRRDLFANINSLLPPPYKT 279 LWKR+ADAAF++C TI+SFFEETLVAIPD VLDSP++E GR+DLF N+ LLPPPY T Sbjct: 308 LWKRRADAAFQSCTTIKSFFEETLVAIPDTVLDSPIAEAPSGRQDLFTNVRGLLPPPYAT 367 Query: 278 REE 270 RE+ Sbjct: 368 REQ 370