BLASTX nr result

ID: Glycyrrhiza23_contig00006518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006518
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41814.1| unknown [Lotus japonicus]                              117   1e-24
gb|ACJ86307.1| unknown [Medicago truncatula]                          111   5e-23
ref|XP_003531118.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   107   1e-21
ref|XP_003524829.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-dihydro...   106   2e-21
ref|XP_002517816.1| tRNA-dihydrouridine synthase A, putative [Ri...   100   9e-20

>gb|AFK41814.1| unknown [Lotus japonicus]
          Length = 425

 Score =  117 bits (293), Expect = 1e-24
 Identities = 57/69 (82%), Positives = 62/69 (89%), Gaps = 1/69 (1%)
 Frame = -2

Query: 458 LWKRKADAAFRNCMTIESFFEETLVAIPDPVLDSPVSEPAPGRRDLFANINSLLPPPYKT 279
           LWKRKADAAFR+C TI+SFFEETLVAIPD VLDSPV EP PGRRDLFAN++SLLPPPY T
Sbjct: 357 LWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPVVEPTPGRRDLFANMDSLLPPPYTT 416

Query: 278 REE-VAVCA 255
           REE V +CA
Sbjct: 417 REEAVIICA 425


>gb|ACJ86307.1| unknown [Medicago truncatula]
          Length = 432

 Score =  111 bits (278), Expect = 5e-23
 Identities = 53/67 (79%), Positives = 58/67 (86%)
 Frame = -2

Query: 455 WKRKADAAFRNCMTIESFFEETLVAIPDPVLDSPVSEPAPGRRDLFANINSLLPPPYKTR 276
           WKR ADAAFRNC TI+SFFEET+ AIPD VLDSPVSEP  GR DLFANI+SLLPP Y+TR
Sbjct: 366 WKRNADAAFRNCTTIKSFFEETIDAIPDSVLDSPVSEPPLGRTDLFANIDSLLPPRYETR 425

Query: 275 EEVAVCA 255
           EEV +CA
Sbjct: 426 EEVVICA 432


>ref|XP_003531118.1| PREDICTED: tRNA-dihydrouridine synthase A-like [Glycine max]
          Length = 430

 Score =  107 bits (267), Expect = 1e-21
 Identities = 53/69 (76%), Positives = 61/69 (88%), Gaps = 1/69 (1%)
 Frame = -2

Query: 458 LWKRKADAAFRNCMTIESFFEETLVAIPDPVLDSPVSEPAPGRRDLFANINSLLPPPYKT 279
           LWKRKADAAF+NC T+ESFFEETLVAIPD VLDSPV+EP PG RDLFAN+++LLP PY+T
Sbjct: 363 LWKRKADAAFKNCTTMESFFEETLVAIPDSVLDSPVAEPPPG-RDLFANMHNLLPAPYRT 421

Query: 278 RE-EVAVCA 255
           RE  V +CA
Sbjct: 422 REATVIICA 430


>ref|XP_003524829.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-dihydrouridine synthase A-like
           [Glycine max]
          Length = 437

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/69 (76%), Positives = 61/69 (88%), Gaps = 1/69 (1%)
 Frame = -2

Query: 458 LWKRKADAAFRNCMTIESFFEETLVAIPDPVLDSPVSEPAPGRRDLFANINSLLPPPYKT 279
           LWKRKADAAF+NC TIESFFEETLVAIPD VLDS V+E  PG RDLFAN+++LLPPPY+T
Sbjct: 370 LWKRKADAAFKNCTTIESFFEETLVAIPDSVLDSLVAESPPG-RDLFANMHNLLPPPYRT 428

Query: 278 REE-VAVCA 255
           REE + +CA
Sbjct: 429 REEAIIICA 437


>ref|XP_002517816.1| tRNA-dihydrouridine synthase A, putative [Ricinus communis]
           gi|223543088|gb|EEF44623.1| tRNA-dihydrouridine synthase
           A, putative [Ricinus communis]
          Length = 375

 Score =  100 bits (250), Expect = 9e-20
 Identities = 45/63 (71%), Positives = 54/63 (85%)
 Frame = -2

Query: 458 LWKRKADAAFRNCMTIESFFEETLVAIPDPVLDSPVSEPAPGRRDLFANINSLLPPPYKT 279
           LWKR+ADAAF++C TI+SFFEETLVAIPD VLDSP++E   GR+DLF N+  LLPPPY T
Sbjct: 308 LWKRRADAAFQSCTTIKSFFEETLVAIPDTVLDSPIAEAPSGRQDLFTNVRGLLPPPYAT 367

Query: 278 REE 270
           RE+
Sbjct: 368 REQ 370


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