BLASTX nr result

ID: Glycyrrhiza23_contig00006513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006513
         (798 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617486.1| DNA polymerase [Medicago truncatula] gi|3555...   301   8e-80
ref|XP_003518521.1| PREDICTED: uncharacterized protein LOC100797...   221   1e-55
ref|XP_003599987.1| DNA polymerase [Medicago truncatula] gi|3554...   108   1e-21
ref|XP_003599989.1| DNA polymerase [Medicago truncatula] gi|3554...    92   1e-16

>ref|XP_003617486.1| DNA polymerase [Medicago truncatula] gi|355518821|gb|AET00445.1|
           DNA polymerase [Medicago truncatula]
          Length = 1084

 Score =  301 bits (772), Expect = 8e-80
 Identities = 156/246 (63%), Positives = 185/246 (75%), Gaps = 1/246 (0%)
 Frame = +3

Query: 63  STQTTALRPYCPLCCRVSHPFXXXXXXXXXXXXXXTPHRRKIKAIQIASNGLRNSLVPSN 242
           +TQ+T+LRPYCPLCCR+S PF              TPHRRKIKAIQIASNGLRNS + SN
Sbjct: 4   TTQSTSLRPYCPLCCRLSRPFSLSLSSCSSLVSL-TPHRRKIKAIQIASNGLRNSTMHSN 62

Query: 243 -FRADLCCPKWTSLGLNKYNDMRHKRDFPYKIPVRISFMKFSNAPTGXXXXXXXXXXXNS 419
             RADL C K TSLGLN++++  +K +FPYK PVR++ MKFSNA              NS
Sbjct: 63  CVRADLLCTKLTSLGLNEHSNTGYKHNFPYKNPVRVTLMKFSNASASMLEEMMVEEEVNS 122

Query: 420 LHSCETQVRMADVAPCNRGVSTTAAERKLSGGDNRGWIVAKDKLAEGKKERNGANKFEKK 599
            HS E QVR  DVAPCN  +STTA ERKL+GGDNRGW +AK+KLAEGKKE NG N++E+K
Sbjct: 123 SHSSEMQVRKVDVAPCNPELSTTATERKLAGGDNRGWTLAKNKLAEGKKEMNGTNRYERK 182

Query: 600 NDSSYASNRFASIGQKQAVSTNRVSNLVRQDHGERVSPSVKHSVLNNSKMFTDSETVVRQ 779
           ++ S+ SNRFASIG++Q  ST+ VSNLVRQ HGE VS SV++SVLNNSKMFTDSETVV Q
Sbjct: 183 SNGSHVSNRFASIGRRQGSSTDVVSNLVRQGHGEHVSSSVQYSVLNNSKMFTDSETVVHQ 242

Query: 780 FNESSL 797
           FNES+L
Sbjct: 243 FNESAL 248


>ref|XP_003518521.1| PREDICTED: uncharacterized protein LOC100797016 [Glycine max]
          Length = 1077

 Score =  221 bits (564), Expect = 1e-55
 Identities = 131/248 (52%), Positives = 152/248 (61%), Gaps = 5/248 (2%)
 Frame = +3

Query: 69  QTTALRPYCPLCCRV-SHPFXXXXXXXXXXXXXXTPHRRKIKAIQIASNGLRNSLVPSNF 245
           + +ALRP+CPLC R  S PF                 RRK+++ QI+ NGLRNS V  NF
Sbjct: 2   EVSALRPHCPLCRRCFSSPFSLPSLLPSQPL-----QRRKMQSFQISYNGLRNSTVLRNF 56

Query: 246 ---RADL-CCPKWTSLGLNKYNDMRHKRDFPYKIPVRISFMKFSNAPTGXXXXXXXXXXX 413
              RAD  CC K TS+GLNKYN  R+KR+F  K PV IS MK SNA TG           
Sbjct: 57  VQSRADFSCCLKGTSVGLNKYNGARYKRNFLCKSPVCISSMKISNASTGTLEEMTEEEEL 116

Query: 414 NSLHSCETQVRMADVAPCNRGVSTTAAERKLSGGDNRGWIVAKDKLAEGKKERNGANKFE 593
           NSL  CE QVR   +A CN   STT   +KLSGGD RGW +AKDKL E KKE NG+NKFE
Sbjct: 117 NSLRPCEMQVRTVGMAACNNEFSTTTLGKKLSGGDYRGWTMAKDKLTENKKEMNGSNKFE 176

Query: 594 KKNDSSYASNRFASIGQKQAVSTNRVSNLVRQDHGERVSPSVKHSVLNNSKMFTDSETVV 773
           ++N S  ASN  ASI Q QAV  N  S +V QD G     SV +SVLNNSK+ TDSE V+
Sbjct: 177 RENGSFSASNGIASIAQNQAVPRNGDSIIVLQDPGTHAPSSVNYSVLNNSKVLTDSEKVI 236

Query: 774 RQFNESSL 797
            Q+N SSL
Sbjct: 237 HQYNGSSL 244


>ref|XP_003599987.1| DNA polymerase [Medicago truncatula] gi|355489035|gb|AES70238.1|
           DNA polymerase [Medicago truncatula]
          Length = 1112

 Score =  108 bits (271), Expect = 1e-21
 Identities = 100/263 (38%), Positives = 125/263 (47%), Gaps = 18/263 (6%)
 Frame = +3

Query: 63  STQTTALRP--YCPLCCRVS----HPFXXXXXXXXXXXXXXTPH--RRKIKAIQIASNGL 218
           S+Q+TA R   YCP C   S     PF              +    RRK K+IQIASN L
Sbjct: 4   SSQSTAFRSTYYCPSCFSFSSSSSRPFRSSLSSLGFFANYGSSQHSRRKSKSIQIASNFL 63

Query: 219 RNSLVPSN---FRADLCCPKWTSLGLNKYNDMRHKRDFPYKIPVRISFMKFSNAPTGXXX 389
           R+  +  +   FR    CPK  S GL K NDM + R+ P    V IS MKFS A      
Sbjct: 64  RHRNLSGSSLQFREGSYCPKRISFGLKKCNDMEYHRNSP----VHISVMKFSTASFSTLK 119

Query: 390 XXXXXXXX---NSLHSCETQVRM-ADVAPCNRGVSTTAAERKLSGGDNRGWIVAKDKLAE 557
                      +SL S + QVRM      C+  +S T   RKLSG D  GW  A  KL +
Sbjct: 120 VTNQTRREEELSSLSSYDRQVRMMTHFGSCSYRLSKTP-RRKLSG-DRTGWAEAGHKLTQ 177

Query: 558 GKKERNGANKFEKKNDSSYASNR---FASIGQKQAVSTNRVSNLVRQDHGERVSPSVKHS 728
            K E +  +K      S Y SN     +SI QK A++ N   NL+  D  E  S SV+HS
Sbjct: 178 IKMEMHDLDK-----RSLYPSNTNTIASSIAQKPAITQNEGHNLMLHDLCEPASSSVQHS 232

Query: 729 VLNNSKMFTDSETVVRQFNESSL 797
           +LNNS +  D+E V  + N SSL
Sbjct: 233 MLNNSMLLIDTERVGTESNVSSL 255


>ref|XP_003599989.1| DNA polymerase [Medicago truncatula] gi|355489037|gb|AES70240.1|
           DNA polymerase [Medicago truncatula]
          Length = 1098

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 91/263 (34%), Positives = 116/263 (44%), Gaps = 18/263 (6%)
 Frame = +3

Query: 63  STQTTALRP--YCPLCCRVSHPFXXXXXXXXXXXXXXTPHRRKIKAIQIASN-------- 212
           S+Q+TA R   YCP C   S                  P R  + ++   +N        
Sbjct: 4   SSQSTAFRSTFYCPSCFSFSSS------------SSSRPFRSSLSSLGFFANYGSSQHRH 51

Query: 213 -GLRNSLVPSNFRADLCCPKWTSLGLNKYNDMRHKRDFPYKIPVRISFMKFSNAPTGXXX 389
             L  S +   FR    CPK  S GL K NDM + R+ P    V IS MKFS A      
Sbjct: 52  RNLSGSFL--QFREGSYCPKRISFGLKKCNDMEYHRNSP----VHISVMKFSTASFSTLK 105

Query: 390 XXXXXXXX---NSLHSCETQVRM-ADVAPCNRGVSTTAAERKLSGGDNRGWIVAKDKLAE 557
                      +SL S + QVRM      C+  +S T   RKLSG D  GW  A  KL +
Sbjct: 106 VTNQTRREEELSSLSSYDRQVRMMTHFGSCSYRLSKTP-RRKLSG-DRTGWAEAGHKLTQ 163

Query: 558 GKKERNGANKFEKKNDSSYASNR---FASIGQKQAVSTNRVSNLVRQDHGERVSPSVKHS 728
            K E +  +K      S Y SN     +SI QK A++ N   NL+  D  E  S SV+HS
Sbjct: 164 IKMEMHDLDK-----RSLYPSNTNTIASSIAQKPAITQNEGRNLMLHDLCEPASSSVQHS 218

Query: 729 VLNNSKMFTDSETVVRQFNESSL 797
           +LNNS +  D+E V  + N SSL
Sbjct: 219 MLNNSMLLIDTERVGTESNVSSL 241


Top