BLASTX nr result

ID: Glycyrrhiza23_contig00006505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006505
         (1496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625838.1| RNA-binding protein [Medicago truncatula] gi...   595   e-168
ref|XP_003520699.1| PREDICTED: polyadenylate-binding protein, cy...   574   e-161
ref|XP_002275366.1| PREDICTED: heterogeneous nuclear ribonucleop...   508   e-141
emb|CBI28315.3| unnamed protein product [Vitis vinifera]              499   e-139
ref|XP_002530322.1| nucleolar phosphoprotein, putative [Ricinus ...   494   e-137

>ref|XP_003625838.1| RNA-binding protein [Medicago truncatula] gi|355500853|gb|AES82056.1|
            RNA-binding protein [Medicago truncatula]
          Length = 477

 Score =  595 bits (1535), Expect = e-168
 Identities = 314/448 (70%), Positives = 333/448 (74%), Gaps = 7/448 (1%)
 Frame = +3

Query: 57   MPGTRQKDVTAQNSGSPDGHSEPEKPTDSDEQVDFDGDNDXXXXXXXXXXXXXXXXXXXX 236
            MPGTRQKD TA+NS SP G+SEPEKPTDS EQVD DGDND                    
Sbjct: 1    MPGTRQKDATARNSESPGGNSEPEKPTDSGEQVDLDGDNDQEESSEEEVEYEEVEVEEEV 60

Query: 237  XXXXXXXXXXXXX--SKPSDGEDEVEKKKHAELLALPPHGSEVYIGGIPHEVSEEDLRVF 410
                           SKP D EDE +KKKHAELLALPPHGSEVYIGGIPHE SE+DLRVF
Sbjct: 61   EEEEEEEEEEEVEEESKPLDEEDEADKKKHAELLALPPHGSEVYIGGIPHETSEKDLRVF 120

Query: 411  CQSVGEVSEVRVMKGKESGEAKGYAFVTFKTKELASKAIEDLNNTEFKGKKIKCSASQAK 590
            CQSVGEV+EVRVMKGKE   AKGYAFVTFKTKELASKA+++LNN+EFKG+KIKCS SQ K
Sbjct: 121  CQSVGEVAEVRVMKGKE---AKGYAFVTFKTKELASKALKELNNSEFKGRKIKCSPSQVK 177

Query: 591  HRLFIGNVPKNWTVEDMKKVVAEVGPGVISVELLKDPQSSGRNRGFAFIEYYNHACAEYS 770
            HRLFIG+VPK WTVEDMKKVVA+VGPGVISVELLKDPQSS RNRGFAFIEY+NHACAEYS
Sbjct: 178  HRLFIGSVPKEWTVEDMKKVVAKVGPGVISVELLKDPQSSSRNRGFAFIEYHNHACAEYS 237

Query: 771  REKMSNSKFKLDNNAPTVSWADPRNSESSAASQVKAVYVKNLPENITQNRLKELFEHHGK 950
            R+KMSNS FKLDNN   VSWADPRNSESS++SQVKAVYVKNLPENITQNRLKELFEHHGK
Sbjct: 238  RQKMSNSNFKLDNNDAIVSWADPRNSESSSSSQVKAVYVKNLPENITQNRLKELFEHHGK 297

Query: 951  ITKVVLPPAKAGQEKSRFGFVHFVDRSSAMKALKNTEKYEIDGQTLECSLAKPQADQRXX 1130
            ITKV LPPAKAGQEKSR+GFVHF DRSSAMKALKNTEKYEI+GQTLECSLAKPQADQ+  
Sbjct: 298  ITKVALPPAKAGQEKSRYGFVHFADRSSAMKALKNTEKYEINGQTLECSLAKPQADQKSS 357

Query: 1131 XXXXXXXXVVLPTYPPRLXXXXXXXXXXXXXXXXXXXXXXQPLMYGXXXXXXXXXXXXXX 1310
                     VLP YPP L                       PLMYG              
Sbjct: 358  GASNSFNSAVLPAYPPPLGYGMVGGGYGAVGAGYGAAGFAPPLMYGPGATPAGMTMMPML 417

Query: 1311 XXDGRIGYVLQQPGLQQP-----APSPV 1379
              DGRI YVLQQPGLQQP     APSPV
Sbjct: 418  LPDGRIAYVLQQPGLQQPSFQQHAPSPV 445


>ref|XP_003520699.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
            nuclear-like [Glycine max]
          Length = 464

 Score =  574 bits (1480), Expect = e-161
 Identities = 301/443 (67%), Positives = 330/443 (74%), Gaps = 5/443 (1%)
 Frame = +3

Query: 57   MPGTRQKDVTAQNSGSPDGHSEPEKPTDSDEQVDFDGDNDXXXXXXXXXXXXXXXXXXXX 236
            MPGT+Q+D T+QN  SP+G+SEPEKPTDSDE+VDFDGDND                    
Sbjct: 1    MPGTKQRD-TSQNPDSPEGNSEPEKPTDSDERVDFDGDNDQEETMEEEVEYEEVEEEEEE 59

Query: 237  XXXXXXXXXXXXX-----SKPSDGEDEVEKKKHAELLALPPHGSEVYIGGIPHEVSEEDL 401
                              ++ +D +DEVEKKKHAELLALPPHGSEVYIGGIP  VSEEDL
Sbjct: 60   EEEEEEEEEEEETKLSDKTRVADTKDEVEKKKHAELLALPPHGSEVYIGGIPQNVSEEDL 119

Query: 402  RVFCQSVGEVSEVRVMKGKESGEAKGYAFVTFKTKELASKAIEDLNNTEFKGKKIKCSAS 581
            RVFCQSVGEVSEVR+MKGKESGEAKGYAFVTF TKELASKAIE+LNN+EFKGK+IKCS S
Sbjct: 120  RVFCQSVGEVSEVRIMKGKESGEAKGYAFVTFMTKELASKAIEELNNSEFKGKRIKCSTS 179

Query: 582  QAKHRLFIGNVPKNWTVEDMKKVVAEVGPGVISVELLKDPQSSGRNRGFAFIEYYNHACA 761
            Q KH+LFIGNVPK WT  DMKKVVAE+GPGVI VELLKDPQ+S RNRG+AFIEYYNHACA
Sbjct: 180  QVKHKLFIGNVPKYWTEGDMKKVVAEIGPGVICVELLKDPQNSSRNRGYAFIEYYNHACA 239

Query: 762  EYSREKMSNSKFKLDNNAPTVSWADPRNSESSAASQVKAVYVKNLPENITQNRLKELFEH 941
            EYSR+KMSNS FKL +NAPTVSWADPRNSESSA S VK+VYVKNLPENITQ+RLKELFEH
Sbjct: 240  EYSRQKMSNSNFKLGSNAPTVSWADPRNSESSAISLVKSVYVKNLPENITQDRLKELFEH 299

Query: 942  HGKITKVVLPPAKAGQEKSRFGFVHFVDRSSAMKALKNTEKYEIDGQTLECSLAKPQADQ 1121
            HGKITKVVLP AK+GQEKSRFGFVHF +RSSAMKALKNTEKYEIDGQ LECSLAKPQA+ 
Sbjct: 300  HGKITKVVLPSAKSGQEKSRFGFVHFAERSSAMKALKNTEKYEIDGQLLECSLAKPQANS 359

Query: 1122 RXXXXXXXXXXVVLPTYPPRLXXXXXXXXXXXXXXXXXXXXXXQPLMYGXXXXXXXXXXX 1301
            +           +LPTYPP L                      QPLMYG           
Sbjct: 360  Q--------KPALLPTYPPHL---GYGMVGGAIGAGYGAAGFAQPLMYGPGPTPGGMAMM 408

Query: 1302 XXXXXDGRIGYVLQQPGLQQPAP 1370
                 DGRI Y++QQPG QQPAP
Sbjct: 409  PMMLSDGRIAYIVQQPGFQQPAP 431


>ref|XP_002275366.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Vitis
            vinifera]
          Length = 503

 Score =  508 bits (1308), Expect = e-141
 Identities = 266/447 (59%), Positives = 305/447 (68%), Gaps = 25/447 (5%)
 Frame = +3

Query: 105  PDGHSEPEKPTDSDEQVDFDGDNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSK- 281
            P+  SEPEKP +SDE+VD D DND                                  + 
Sbjct: 17   PEKLSEPEKPIESDERVDLDEDNDPDEAMDEEVEYEEVEVEEEVEEVEEEVEEEEVEEEE 76

Query: 282  --------------------PSDG----EDEVEKKKHAELLALPPHGSEVYIGGIPHEVS 389
                                PS G    EDE E KKHAELLALPPHGSEVY+GGI  + S
Sbjct: 77   EEVEEEEEEEEANEADEQKSPSGGGGKIEDEDESKKHAELLALPPHGSEVYVGGISQDAS 136

Query: 390  EEDLRVFCQSVGEVSEVRVMKGKESGEAKGYAFVTFKTKELASKAIEDLNNTEFKGKKIK 569
            EEDL+ FC+SVGEV+EVR+MKGK+SGE KG+AFVTF+  ELASKAIE+LNNTEFKG+KIK
Sbjct: 137  EEDLKSFCESVGEVTEVRIMKGKDSGENKGFAFVTFRNVELASKAIEELNNTEFKGRKIK 196

Query: 570  CSASQAKHRLFIGNVPKNWTVEDMKKVVAEVGPGVISVELLKDPQSSGRNRGFAFIEYYN 749
            CS SQAKHRLFIGNVP++W  ED+KKVV E+GPGV +VEL+KD ++S  NRGFAFI+YYN
Sbjct: 197  CSTSQAKHRLFIGNVPRSWGEEDIKKVVTEIGPGVTAVELVKDMKNSSNNRGFAFIDYYN 256

Query: 750  HACAEYSREKMSNSKFKLDNNAPTVSWADPRNSESSAASQVKAVYVKNLPENITQNRLKE 929
            HACAEYSR+KM N KFKLDNNAPTVSWADP+N++SS ASQVKAVYVKNLP+NITQ++LK+
Sbjct: 257  HACAEYSRQKMMNPKFKLDNNAPTVSWADPKNADSSPASQVKAVYVKNLPKNITQDQLKQ 316

Query: 930  LFEHHGKITKVVLPPAKAGQEKSRFGFVHFVDRSSAMKALKNTEKYEIDGQTLECSLAKP 1109
            LFEHHGKITKVVLPPAK+GQEKSR GFVHF +RSSAMKALKNTEKYEIDGQ LECSLAKP
Sbjct: 317  LFEHHGKITKVVLPPAKSGQEKSRIGFVHFAERSSAMKALKNTEKYEIDGQVLECSLAKP 376

Query: 1110 QADQRXXXXXXXXXXVVLPTYPPRLXXXXXXXXXXXXXXXXXXXXXXQPLMYGXXXXXXX 1289
            QADQ+           +L +YPPR+                      QPL+YG       
Sbjct: 377  QADQKSVGGSNSQKSGLLSSYPPRVGYGFVGGAYGALGAGYGTAGFAQPLIYGRGPTPAG 436

Query: 1290 XXXXXXXXXDGRIGYVLQQPGLQQPAP 1370
                     DGRIGYVLQQPG Q   P
Sbjct: 437  MAMMPMLLPDGRIGYVLQQPGAQPHTP 463


>emb|CBI28315.3| unnamed protein product [Vitis vinifera]
          Length = 434

 Score =  499 bits (1285), Expect = e-139
 Identities = 247/359 (68%), Positives = 282/359 (78%)
 Frame = +3

Query: 294  EDEVEKKKHAELLALPPHGSEVYIGGIPHEVSEEDLRVFCQSVGEVSEVRVMKGKESGEA 473
            EDE E KKHAELLALPPHGSEVY+GGI  + SEEDL+ FC+SVGEV+EVR+MKGK+SGE 
Sbjct: 36   EDEDESKKHAELLALPPHGSEVYVGGISQDASEEDLKSFCESVGEVTEVRIMKGKDSGEN 95

Query: 474  KGYAFVTFKTKELASKAIEDLNNTEFKGKKIKCSASQAKHRLFIGNVPKNWTVEDMKKVV 653
            KG+AFVTF+  ELASKAIE+LNNTEFKG+KIKCS SQAKHRLFIGNVP++W  ED+KKVV
Sbjct: 96   KGFAFVTFRNVELASKAIEELNNTEFKGRKIKCSTSQAKHRLFIGNVPRSWGEEDIKKVV 155

Query: 654  AEVGPGVISVELLKDPQSSGRNRGFAFIEYYNHACAEYSREKMSNSKFKLDNNAPTVSWA 833
             E+GPGV +VEL+KD ++S  NRGFAFI+YYNHACAEYSR+KM N KFKLDNNAPTVSWA
Sbjct: 156  TEIGPGVTAVELVKDMKNSSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDNNAPTVSWA 215

Query: 834  DPRNSESSAASQVKAVYVKNLPENITQNRLKELFEHHGKITKVVLPPAKAGQEKSRFGFV 1013
            DP+N++SS ASQVKAVYVKNLP+NITQ++LK+LFEHHGKITKVVLPPAK+GQEKSR GFV
Sbjct: 216  DPKNADSSPASQVKAVYVKNLPKNITQDQLKQLFEHHGKITKVVLPPAKSGQEKSRIGFV 275

Query: 1014 HFVDRSSAMKALKNTEKYEIDGQTLECSLAKPQADQRXXXXXXXXXXVVLPTYPPRLXXX 1193
            HF +RSSAMKALKNTEKYEIDGQ LECSLAKPQADQ+           +L +YPPR+   
Sbjct: 276  HFAERSSAMKALKNTEKYEIDGQVLECSLAKPQADQKSVGGSNSQKSGLLSSYPPRVGYG 335

Query: 1194 XXXXXXXXXXXXXXXXXXXQPLMYGXXXXXXXXXXXXXXXXDGRIGYVLQQPGLQQPAP 1370
                               QPL+YG                DGRIGYVLQQPG Q   P
Sbjct: 336  FVGGAYGALGAGYGTAGFAQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGAQPHTP 394


>ref|XP_002530322.1| nucleolar phosphoprotein, putative [Ricinus communis]
            gi|223530126|gb|EEF32038.1| nucleolar phosphoprotein,
            putative [Ricinus communis]
          Length = 481

 Score =  494 bits (1271), Expect = e-137
 Identities = 256/434 (58%), Positives = 302/434 (69%), Gaps = 17/434 (3%)
 Frame = +3

Query: 120  EPEKPTDSDEQVDFDGDN----------------DXXXXXXXXXXXXXXXXXXXXXXXXX 251
            EPEK  +SDE VD DGDN                +                         
Sbjct: 16   EPEKLVESDEGVDLDGDNGQEETMEEEVEYEEVEEEEEVEEIEEEEEEVEEEVEEEEEIE 75

Query: 252  XXXXXXXXSKPSDGED-EVEKKKHAELLALPPHGSEVYIGGIPHEVSEEDLRVFCQSVGE 428
                     K SD E+ + E++KHAELLALPPHGSEVY+GGIP + SE+DLR FC+S+GE
Sbjct: 76   ESANEADAQKGSDSEEGQDEERKHAELLALPPHGSEVYLGGIPIDASEQDLRHFCESIGE 135

Query: 429  VSEVRVMKGKESGEAKGYAFVTFKTKELASKAIEDLNNTEFKGKKIKCSASQAKHRLFIG 608
            V+EVR+MKGK S + KGYAFVTF++KELASKAIE LNNTEFKG+KIKCS SQA HRLF+G
Sbjct: 136  VTEVRIMKGKASSDTKGYAFVTFRSKELASKAIEQLNNTEFKGRKIKCSTSQANHRLFLG 195

Query: 609  NVPKNWTVEDMKKVVAEVGPGVISVELLKDPQSSGRNRGFAFIEYYNHACAEYSREKMSN 788
            NVP++W  +DM +VV ++GPGVISVELLKDPQ+S RNRGFAFIEYYNHACA+YSR+KMSN
Sbjct: 196  NVPRDWEEKDMMQVVMKIGPGVISVELLKDPQNSSRNRGFAFIEYYNHACADYSRKKMSN 255

Query: 789  SKFKLDNNAPTVSWADPRNSESSAASQVKAVYVKNLPENITQNRLKELFEHHGKITKVVL 968
             +FKLD+NAPTVSWADP+N+ SSAASQVKAVYVKNLP +ITQ+RL++LFE HGK+TKVV+
Sbjct: 256  PQFKLDDNAPTVSWADPKNAGSSAASQVKAVYVKNLPHDITQDRLRQLFERHGKVTKVVV 315

Query: 969  PPAKAGQEKSRFGFVHFVDRSSAMKALKNTEKYEIDGQTLECSLAKPQADQRXXXXXXXX 1148
            PPAKAG E+SRF FVHF +RSSAMKALKNTEKYEIDGQ LECSLAKPQADQ+        
Sbjct: 316  PPAKAGHERSRFAFVHFAERSSAMKALKNTEKYEIDGQVLECSLAKPQADQKSSGGSNLQ 375

Query: 1149 XXVVLPTYPPRLXXXXXXXXXXXXXXXXXXXXXXQPLMYGXXXXXXXXXXXXXXXXDGRI 1328
              V+ PT+PPRL                      QP++YG                DGRI
Sbjct: 376  KSVLHPTFPPRL-GYGLVGGTYGALGAGYGASFAQPMIYGRGPTPAGISMMPMLLPDGRI 434

Query: 1329 GYVLQQPGLQQPAP 1370
            GYV+QQPG+Q   P
Sbjct: 435  GYVMQQPGMQPQTP 448


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