BLASTX nr result

ID: Glycyrrhiza23_contig00006502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006502
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624849.1| F-box/LRR-repeat protein [Medicago truncatul...   132   3e-29
ref|XP_003589995.1| F-box/LRR-repeat protein [Medicago truncatul...   130   1e-28
ref|XP_003589973.1| F-box/LRR-repeat protein [Medicago truncatul...   130   1e-28
gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [...   129   4e-28
ref|XP_003622277.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   122   3e-26

>ref|XP_003624849.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|87162852|gb|ABD28647.1| Cyclin-like F-box; FBD; Zinc
           finger, FYVE/PHD-type [Medicago truncatula]
           gi|355499864|gb|AES81067.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 481

 Score =  132 bits (332), Expect = 3e-29
 Identities = 80/173 (46%), Positives = 101/173 (58%), Gaps = 2/173 (1%)
 Frame = -3

Query: 527 TSILSKRWRPLCLSLLTLEFDEETFPPDSDFRHSVYXXXXXXXXXXXXXSFHLKLSNSSK 348
           TSILSKRWRPL LS L L  D+E FP    F + VY             SFHL+  N   
Sbjct: 135 TSILSKRWRPLWLSQLFLNLDDEPFPDSPTFCNFVYSLMAMRDITLPILSFHLQCWNDYD 194

Query: 347 CDQYDINRFVNFATQRGIENLTLDID--LFGGITLPRCVLGATTLVVLKLKMIMVNDLPY 174
           C   DI  F+  A QRG+ENL +D    LF  +TLP  V  + TL +LKLK I +N++P+
Sbjct: 195 CR--DIYNFLYIAIQRGVENLNIDFSHSLFSQMTLPSFVFSSKTLSILKLKQITLNEVPF 252

Query: 173 VNFPSLKTLHLDCVTFMSYEYLEKLLCMCPILEDLQSADLDIDDYKRFLPHGE 15
           VN PSLK L+LD VTF  YE + KLL  CPIL+ L + +L ++     LP+ E
Sbjct: 253 VNLPSLKALYLDVVTFTYYELILKLLSGCPILQYLGTNNLVVE-----LPYSE 300


>ref|XP_003589995.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355479043|gb|AES60246.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 450

 Score =  130 bits (327), Expect = 1e-28
 Identities = 77/168 (45%), Positives = 104/168 (61%)
 Frame = -3

Query: 530 ATSILSKRWRPLCLSLLTLEFDEETFPPDSDFRHSVYXXXXXXXXXXXXXSFHLKLSNSS 351
           AT++LSKRW+PL LS L L F++  FP  S FR  +              SF+LK     
Sbjct: 110 ATTVLSKRWKPLFLSQLILNFEDNPFPNPSQFRRFLNSFIAERDNNLPILSFNLKCR--F 167

Query: 350 KCDQYDINRFVNFATQRGIENLTLDIDLFGGITLPRCVLGATTLVVLKLKMIMVNDLPYV 171
           +  +YDI +FV    QRG++NL++D+ LF G  +P CVL   TL VLKLK +   D+P+V
Sbjct: 168 RYFKYDITKFVTNVVQRGVQNLSIDL-LFHG-RVPTCVLTTKTLAVLKLKRLTF-DVPHV 224

Query: 170 NFPSLKTLHLDCVTFMSYEYLEKLLCMCPILEDLQSADLDIDDYKRFL 27
           + PSLK LHL+ VTF  +EY+ KLL  CPIL +L++ DL I+ Y R L
Sbjct: 225 HLPSLKVLHLEHVTFGYFEYITKLLSGCPILNELETKDLFIEQYSRVL 272


>ref|XP_003589973.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355479021|gb|AES60224.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 485

 Score =  130 bits (327), Expect = 1e-28
 Identities = 77/168 (45%), Positives = 104/168 (61%)
 Frame = -3

Query: 530 ATSILSKRWRPLCLSLLTLEFDEETFPPDSDFRHSVYXXXXXXXXXXXXXSFHLKLSNSS 351
           AT++LSKRW+PL LS L L F++  FP  S FR  +              SF+LK     
Sbjct: 110 ATTVLSKRWKPLFLSQLILNFEDNPFPNPSQFRRFLNSFIAERDNNLPILSFNLKCR--F 167

Query: 350 KCDQYDINRFVNFATQRGIENLTLDIDLFGGITLPRCVLGATTLVVLKLKMIMVNDLPYV 171
           +  +YDI +FV    QRG++NL++D+ LF G  +P CVL   TL VLKLK +   D+P+V
Sbjct: 168 RYFKYDITKFVTNVVQRGVQNLSIDL-LFHG-RVPTCVLTTKTLAVLKLKRLTF-DVPHV 224

Query: 170 NFPSLKTLHLDCVTFMSYEYLEKLLCMCPILEDLQSADLDIDDYKRFL 27
           + PSLK LHL+ VTF  +EY+ KLL  CPIL +L++ DL I+ Y R L
Sbjct: 225 HLPSLKVLHLEHVTFGYFEYITKLLSGCPILNELETKDLFIEQYSRVL 272


>gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [Medicago
           truncatula]
          Length = 1116

 Score =  129 bits (323), Expect = 4e-28
 Identities = 81/177 (45%), Positives = 100/177 (56%), Gaps = 6/177 (3%)
 Frame = -3

Query: 527 TSILSKRWRPLCLSLLTLEFDEETFPPDSDFRHSVYXXXXXXXXXXXXXSFHLKLSNSSK 348
           TSILSKR RPL LS L L  D+E FP    F +  Y             SFHL+  N   
Sbjct: 75  TSILSKRSRPLWLSQLFLNLDDEPFPDSLTFCNFGYSLMAMRDITLPILSFHLECWNYYD 134

Query: 347 CDQY--DINRFVNFATQRGIENLTLDID----LFGGITLPRCVLGATTLVVLKLKMIMVN 186
           C     DI +FVN A QRG+ENL +D      LF  + LP  V  + TL +LKLK I +N
Sbjct: 135 CRDISEDIYKFVNIAIQRGVENLNIDFSSSHSLFSRMALPSFVFSSKTLSILKLKQITLN 194

Query: 185 DLPYVNFPSLKTLHLDCVTFMSYEYLEKLLCMCPILEDLQSADLDIDDYKRFLPHGE 15
           ++  VN PSLK L+LD VTF  YEY+ KLL  CPIL+DL + DL ++     LP+ E
Sbjct: 195 EVTCVNLPSLKALYLDVVTFTYYEYILKLLSGCPILQDLGANDLRVE-----LPYSE 246


>ref|XP_003622277.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355497292|gb|AES78495.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 356

 Score =  122 bits (306), Expect = 3e-26
 Identities = 74/162 (45%), Positives = 96/162 (59%), Gaps = 3/162 (1%)
 Frame = -3

Query: 530 ATSILSKRWRPLCLSLLTLEFDEETFPPDSDFRHSVY-XXXXXXXXXXXXXSFHLKLSNS 354
           ATSILSKRW PL LS+LTL+FD++ F   S FRH VY              SF LK  NS
Sbjct: 35  ATSILSKRWNPLWLSVLTLDFDDQNFTEFSTFRHFVYSVIALRNITLQTIQSFRLKCGNS 94

Query: 353 SKCDQYDINRFVNFATQRGIENLTLDIDLFG-GITLPRCVLGATTLVVLKLKMIMVNDLP 177
           S  + +D+ RF++   QRGI+NL L++  F  G  LP CV   + L  LKLK + ++   
Sbjct: 95  SGFNPHDVKRFIHAIFQRGIQNLNLEMSPFKLGFKLPHCVFSCSNLTALKLKGLAIDYSC 154

Query: 176 YVNFPSLKTLHLDCVTF-MSYEYLEKLLCMCPILEDLQSADL 54
             NFP LKTLHL  ++F    +   +LL  CPILEDL++ DL
Sbjct: 155 DFNFPLLKTLHLYTISFGRDRDCFLRLLKGCPILEDLETKDL 196


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