BLASTX nr result

ID: Glycyrrhiza23_contig00006472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006472
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21094.3| unnamed protein product [Vitis vinifera]              119   3e-25
gb|AFW64137.1| 60S ribosomal protein L39, partial [Zea mays]          116   2e-24
ref|XP_003572901.1| PREDICTED: 60S ribosomal protein L39-like [B...   115   5e-24
dbj|BAD19088.1| putative 60S ribosomal protein L39 [Oryza sativa...   114   6e-24
gb|AFW85570.1| 60S ribosomal protein L39, partial [Zea mays]          114   1e-23

>emb|CBI21094.3| unnamed protein product [Vitis vinifera]
          Length = 112

 Score =  119 bits (298), Expect = 3e-25
 Identities = 61/77 (79%), Positives = 66/77 (85%)
 Frame = -3

Query: 488 VSWLGFSRISLYSTLGAVEHPVSEAKMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNT 309
           +S+LGFS  SL S   A +  +S AKMPSHKTF IKKKLAKKMRQNRPIP+WIRMRTDNT
Sbjct: 38  LSFLGFSPTSLSSPDLAAD--LSTAKMPSHKTFIIKKKLAKKMRQNRPIPHWIRMRTDNT 95

Query: 308 IRYNAKRRHWRRTKLGF 258
           IRYNAKRRHWRRTKLGF
Sbjct: 96  IRYNAKRRHWRRTKLGF 112


>gb|AFW64137.1| 60S ribosomal protein L39, partial [Zea mays]
          Length = 77

 Score =  116 bits (291), Expect = 2e-24
 Identities = 54/56 (96%), Positives = 54/56 (96%)
 Frame = -3

Query: 425 VSEAKMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 258
           VS A MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 22  VSAAAMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 77


>ref|XP_003572901.1| PREDICTED: 60S ribosomal protein L39-like [Brachypodium distachyon]
          Length = 97

 Score =  115 bits (287), Expect = 5e-24
 Identities = 53/56 (94%), Positives = 54/56 (96%)
 Frame = -3

Query: 425 VSEAKMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 258
           VS A MPSHKTFRIK+KLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 42  VSAATMPSHKTFRIKQKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 97


>dbj|BAD19088.1| putative 60S ribosomal protein L39 [Oryza sativa Japonica Group]
          Length = 118

 Score =  114 bits (286), Expect = 6e-24
 Identities = 53/56 (94%), Positives = 53/56 (94%)
 Frame = -3

Query: 425 VSEAKMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 258
           V  A MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 63  VPAATMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 118


>gb|AFW85570.1| 60S ribosomal protein L39, partial [Zea mays]
          Length = 99

 Score =  114 bits (284), Expect = 1e-23
 Identities = 54/57 (94%), Positives = 55/57 (96%)
 Frame = -3

Query: 428 PVSEAKMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 258
           P +EA MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 44  PPAEA-MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 99


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