BLASTX nr result

ID: Glycyrrhiza23_contig00006454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006454
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544940.1| PREDICTED: root phototropism protein 2-like ...   145   3e-33
ref|XP_003616056.1| Root phototropism protein [Medicago truncatu...   142   3e-32
ref|XP_003519296.1| PREDICTED: root phototropism protein 2 [Glyc...   140   1e-31
gb|ACJ85866.1| unknown [Medicago truncatula]                          140   1e-31
ref|XP_003537370.1| PREDICTED: root phototropism protein 2-like ...   139   2e-31

>ref|XP_003544940.1| PREDICTED: root phototropism protein 2-like [Glycine max]
          Length = 567

 Score =  145 bits (366), Expect = 3e-33
 Identities = 75/100 (75%), Positives = 86/100 (86%)
 Frame = -3

Query: 337 QLQKDVSLVRENEELRTELMRMKMYISDMQKNGNAATTSSGKETAAIASVSAPKKPTFFS 158
           QLQ DVSLVRENEELR+ELM+MKM+ISDMQK+G+  T+SSG+E   +A     KKPTFFS
Sbjct: 474 QLQADVSLVRENEELRSELMKMKMFISDMQKHGHG-TSSSGRENIGLA-----KKPTFFS 527

Query: 157 SVSKKLGKLNPFKHGSKDTSHIDDGPVDFTKPRRRRFSVS 38
           S+SKKL KLNPFK+GSKDTSHIDD PVD TKPRRRRFS+S
Sbjct: 528 SMSKKLSKLNPFKNGSKDTSHIDDAPVDLTKPRRRRFSIS 567


>ref|XP_003616056.1| Root phototropism protein [Medicago truncatula]
           gi|355517391|gb|AES99014.1| Root phototropism protein
           [Medicago truncatula]
          Length = 579

 Score =  142 bits (358), Expect = 3e-32
 Identities = 76/104 (73%), Positives = 84/104 (80%), Gaps = 3/104 (2%)
 Frame = -3

Query: 340 NQLQKDVSLVRENEELRTELMRMKMYISDMQKNGNAATTSS---GKETAAIASVSAPKKP 170
           NQLQ DV+LVRENEELRTEL+RMKMY+SD+QKNG+  TTSS   GKE          KK 
Sbjct: 485 NQLQTDVTLVRENEELRTELIRMKMYVSDLQKNGHGGTTSSSEVGKEV---------KKS 535

Query: 169 TFFSSVSKKLGKLNPFKHGSKDTSHIDDGPVDFTKPRRRRFSVS 38
           TFFSSVSKKLGKLNPFK+GSKDTSHI+D  VD TKPRRRRFS+S
Sbjct: 536 TFFSSVSKKLGKLNPFKNGSKDTSHIEDVGVDLTKPRRRRFSIS 579


>ref|XP_003519296.1| PREDICTED: root phototropism protein 2 [Glycine max]
          Length = 580

 Score =  140 bits (353), Expect = 1e-31
 Identities = 72/100 (72%), Positives = 85/100 (85%)
 Frame = -3

Query: 337 QLQKDVSLVRENEELRTELMRMKMYISDMQKNGNAATTSSGKETAAIASVSAPKKPTFFS 158
           QLQ DVSLVRENEELR+ELM+MKM+ISD+QKN +  T+SSG+E     ++   KKPTFFS
Sbjct: 487 QLQADVSLVRENEELRSELMKMKMFISDLQKNVHG-TSSSGRE-----NIGPTKKPTFFS 540

Query: 157 SVSKKLGKLNPFKHGSKDTSHIDDGPVDFTKPRRRRFSVS 38
           S+SKKL KLNPFK+GSKDTSHIDD PVD TKPR+RRFS+S
Sbjct: 541 SMSKKLSKLNPFKNGSKDTSHIDDAPVDLTKPRKRRFSIS 580


>gb|ACJ85866.1| unknown [Medicago truncatula]
          Length = 376

 Score =  140 bits (353), Expect = 1e-31
 Identities = 75/104 (72%), Positives = 83/104 (79%), Gaps = 3/104 (2%)
 Frame = -3

Query: 340 NQLQKDVSLVRENEELRTELMRMKMYISDMQKNGNAATTSS---GKETAAIASVSAPKKP 170
           NQLQ DV+LVRENEELRTEL+RMKMY+SD+QKNG+  TTSS   GKE          K  
Sbjct: 282 NQLQTDVTLVRENEELRTELIRMKMYVSDLQKNGHGGTTSSSEVGKEV---------KNS 332

Query: 169 TFFSSVSKKLGKLNPFKHGSKDTSHIDDGPVDFTKPRRRRFSVS 38
           TFFSSVSKKLGKLNPFK+GSKDTSHI+D  VD TKPRRRRFS+S
Sbjct: 333 TFFSSVSKKLGKLNPFKNGSKDTSHIEDVGVDLTKPRRRRFSIS 376


>ref|XP_003537370.1| PREDICTED: root phototropism protein 2-like [Glycine max]
          Length = 488

 Score =  139 bits (350), Expect = 2e-31
 Identities = 72/103 (69%), Positives = 82/103 (79%), Gaps = 2/103 (1%)
 Frame = -3

Query: 340 NQLQKDVSLVRENEELRTELMRMKMYISDMQ--KNGNAATTSSGKETAAIASVSAPKKPT 167
           NQLQ DV+LVRENEELRTELM+MKMYISD+Q  KN N      G  T + A+   PKK T
Sbjct: 386 NQLQMDVTLVRENEELRTELMKMKMYISDLQQNKNTNNGANPQGHGTTSSAANPNPKKAT 445

Query: 166 FFSSVSKKLGKLNPFKHGSKDTSHIDDGPVDFTKPRRRRFSVS 38
           FFSSVSK LGKLNPF++GSKDT+H++DG VD TKPRRRRFSVS
Sbjct: 446 FFSSVSKTLGKLNPFRNGSKDTTHLEDGNVDLTKPRRRRFSVS 488


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