BLASTX nr result

ID: Glycyrrhiza23_contig00006429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006429
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40194.1|RB11D_LOTJA RecName: Full=Ras-related protein Rab11D...    60   2e-07
ref|XP_003596706.1| Ras-related protein Rab-11A [Medicago trunca...    55   5e-06

>sp|Q40194.1|RB11D_LOTJA RecName: Full=Ras-related protein Rab11D gi|1370148|emb|CAA98180.1|
           RAB11D [Lotus japonicus]
          Length = 218

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/32 (81%), Positives = 32/32 (100%)
 Frame = -3

Query: 314 NAGASSGVPSKGQTINVKEDSSVLKRYGCCSS 219
           ++G+SSG+PSKGQTINVKEDSSVLKR+GCCS+
Sbjct: 187 DSGSSSGLPSKGQTINVKEDSSVLKRFGCCST 218


>ref|XP_003596706.1| Ras-related protein Rab-11A [Medicago truncatula]
           gi|355485754|gb|AES66957.1| Ras-related protein Rab-11A
           [Medicago truncatula]
          Length = 218

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = -3

Query: 308 GASSGVPSKGQTINVKEDSSVLKRYGCCSS 219
           G+SS VPS GQTINVKEDSSVLKR+GCCS+
Sbjct: 189 GSSSSVPSVGQTINVKEDSSVLKRFGCCSN 218


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