BLASTX nr result

ID: Glycyrrhiza23_contig00006320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006320
         (1036 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK33504.1| unknown [Lotus japonicus]                              375   e-102
ref|XP_003545948.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   361   1e-97
gb|ACU19159.1| unknown [Glycine max]                                  358   2e-96
ref|XP_003543049.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   357   3e-96
ref|XP_003529322.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   318   1e-84

>gb|AFK33504.1| unknown [Lotus japonicus]
          Length = 245

 Score =  375 bits (964), Expect = e-102
 Identities = 188/232 (81%), Positives = 199/232 (85%), Gaps = 11/232 (4%)
 Frame = -2

Query: 858 MAFQHYCSNESKTIPNAVTETENPNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHV 679
           MAFQHY S E KT PN+VTETE+ NGCFDCNICLD AHEPVVTLCGHLYCWPCIYKWLHV
Sbjct: 1   MAFQHYFSQELKTTPNSVTETESSNGCFDCNICLDIAHEPVVTLCGHLYCWPCIYKWLHV 60

Query: 678 QSDSLGPDEHPQCPVCKVDISHSTMIPLYGRGQAPPGGKSSRGDVFIPPRPTASGAQALL 499
           QSDSL PDEHPQCPVCKVDISHSTM+PLYGRG AP GGK+S  D+F PPRP ASGAQALL
Sbjct: 61  QSDSLAPDEHPQCPVCKVDISHSTMVPLYGRGHAPRGGKASCCDLFTPPRPPASGAQALL 120

Query: 498 TTA-----SQSGQQLQYRNPYQGQHFSSPPYQEE--DATSQMLNLGAS--MTPGSH-HP- 352
            T+     SQ  QQLQYRNPYQGQ+FSSP YQEE  DATSQM NLGAS   TPGSH HP 
Sbjct: 121 GTSSSSQNSQQQQQLQYRNPYQGQYFSSPLYQEEDDDATSQMFNLGASTMTTPGSHPHPV 180

Query: 351 VGMFGEMVFARVFGNSENLFAYPNSYQLMGSNSSRLRRQEMQADKFLNRISV 196
           VGMFGEMVFARVFGNSENL+A PNS+QLM SN SR+RRQEMQADKFLNRIS+
Sbjct: 181 VGMFGEMVFARVFGNSENLYASPNSHQLMRSNGSRMRRQEMQADKFLNRISI 232


>ref|XP_003545948.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max]
          Length = 232

 Score =  361 bits (927), Expect = 1e-97
 Identities = 180/237 (75%), Positives = 193/237 (81%), Gaps = 3/237 (1%)
 Frame = -2

Query: 858 MAFQHYCSNESKTIPNAVTETENPNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHV 679
           MAFQHY S + KTIPNA TETEN NGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHV
Sbjct: 1   MAFQHYISRDLKTIPNAATETENSNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHV 60

Query: 678 QSDSLGPDEHPQCPVCKVDISHSTMIPLYGRGQAPPG-GKSSRGDVFIPPRPTASGAQAL 502
           QSDSL PDEHPQCPVCK DIS+STM+PLYGRG A    GK+S  DVFIPPRP+AS  QAL
Sbjct: 61  QSDSLAPDEHPQCPVCKADISNSTMVPLYGRGHAATAEGKTSSCDVFIPPRPSASCVQAL 120

Query: 501 LTTASQSGQQLQYRNPYQGQHFSSPPYQEE-DATSQMLNLGASMTPGSHHPV-GMFGEMV 328
           L T+SQ GQ L YRNPYQG +FSS PYQEE DATSQMLNLG+      HHPV GMFGEMV
Sbjct: 121 LATSSQRGQHLPYRNPYQGHYFSSHPYQEEDDATSQMLNLGS-----HHHPVTGMFGEMV 175

Query: 327 FARVFGNSENLFAYPNSYQLMGSNSSRLRRQEMQADKFLNRISVXXXXXXXXXLIVF 157
           +ARVFGN ENL+AYPNSYQLMGS + RLRRQEMQA K LNRIS+         L+VF
Sbjct: 176 YARVFGNPENLYAYPNSYQLMGSATPRLRRQEMQAHKSLNRISIFLFCCFLLCLVVF 232


>gb|ACU19159.1| unknown [Glycine max]
          Length = 232

 Score =  358 bits (918), Expect = 2e-96
 Identities = 179/237 (75%), Positives = 191/237 (80%), Gaps = 3/237 (1%)
 Frame = -2

Query: 858 MAFQHYCSNESKTIPNAVTETENPNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHV 679
           MAFQHY S + KTIPNA TETEN NGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHV
Sbjct: 1   MAFQHYISRDLKTIPNAATETENSNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHV 60

Query: 678 QSDSLGPDEHPQCPVCKVDISHSTMIPLYGRGQAPPG-GKSSRGDVFIPPRPTASGAQAL 502
           QSDSL PDEHPQCPVCK DIS+STM+PLYGRG A    GK+S  DVFIPPRP AS  QAL
Sbjct: 61  QSDSLAPDEHPQCPVCKADISNSTMVPLYGRGHAATAEGKTSSCDVFIPPRPFASCVQAL 120

Query: 501 LTTASQSGQQLQYRNPYQGQHFSSPPYQEE-DATSQMLNLGASMTPGSHHPV-GMFGEMV 328
           L T+SQ GQ L YRNPYQG +FS  PYQEE DATSQMLNLG+      HHPV GMFGEMV
Sbjct: 121 LATSSQRGQHLPYRNPYQGHYFSFHPYQEEDDATSQMLNLGS-----HHHPVTGMFGEMV 175

Query: 327 FARVFGNSENLFAYPNSYQLMGSNSSRLRRQEMQADKFLNRISVXXXXXXXXXLIVF 157
           +ARVFGN ENL+AYPNSYQLMGS + RLRRQEMQA K LNRIS+         L+VF
Sbjct: 176 YARVFGNPENLYAYPNSYQLMGSATPRLRRQEMQAHKSLNRISIFLFCCFLLCLVVF 232


>ref|XP_003543049.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max]
          Length = 232

 Score =  357 bits (915), Expect = 3e-96
 Identities = 181/238 (76%), Positives = 194/238 (81%), Gaps = 4/238 (1%)
 Frame = -2

Query: 858 MAFQHYCSNESKTIPNAVTETENPNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHV 679
           MAFQHY S + KTIPNAVTE ENPNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHV
Sbjct: 1   MAFQHYISRDLKTIPNAVTEAENPNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHV 60

Query: 678 QSDSLGPDEHPQCPVCKVDISHSTMIPLYGRGQA--PPGGKSSRGDVFIPPRPTASGAQA 505
           QSDSL PDEHPQCPVCK DIS+STM+PLYGRG A     GK++  DVFIPPRP+AS AQA
Sbjct: 61  QSDSLPPDEHPQCPVCKADISNSTMVPLYGRGHAATTAEGKTASCDVFIPPRPSASCAQA 120

Query: 504 LLTTASQSGQQLQYRNPYQGQHFSSPPYQEE-DATSQMLNLGASMTPGSHHPV-GMFGEM 331
           LL T SQ GQ L YRNPYQG +F+S PYQEE DATSQMLNLG+      HHPV GMFGEM
Sbjct: 121 LLAT-SQRGQHLPYRNPYQGHYFTSHPYQEEDDATSQMLNLGS-----HHHPVTGMFGEM 174

Query: 330 VFARVFGNSENLFAYPNSYQLMGSNSSRLRRQEMQADKFLNRISVXXXXXXXXXLIVF 157
           V+ARVFGN ENL+AYPNSYQLMGS + RLRRQEMQA K LNRIS+         LIVF
Sbjct: 175 VYARVFGNPENLYAYPNSYQLMGSATPRLRRQEMQAHKSLNRISIFLFCCFLLCLIVF 232


>ref|XP_003529322.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max]
          Length = 248

 Score =  318 bits (816), Expect = 1e-84
 Identities = 167/248 (67%), Positives = 187/248 (75%), Gaps = 14/248 (5%)
 Frame = -2

Query: 858 MAFQHYCSNESKTIPNA----VTETENPNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYK 691
           MA +HY S E KT P+     +T TEN +GCFDCNICLDFAHEPVVTLCGHLYCWPCIYK
Sbjct: 1   MALEHYLSQEWKTSPSPSPSPMTVTENLDGCFDCNICLDFAHEPVVTLCGHLYCWPCIYK 60

Query: 690 WLHVQSDSLGPDEHPQCPVCKVDISHSTMIPLYGRGQA-----PPGGKSSRGDVFIPPRP 526
           WLHVQS SL PDEHPQCPVCK DI H+TM+PLYGRGQ        G  SS    FIPPRP
Sbjct: 61  WLHVQSASLAPDEHPQCPVCKDDICHTTMVPLYGRGQGIAHSDRDGKASSYRGSFIPPRP 120

Query: 525 TASGAQALLTTASQSGQQLQYRNPYQGQHFSSPPYQEED-ATSQMLNLGASM-TPG-SHH 355
            A GAQ+L++T+SQS QQL YRNPYQ QHF+ P YQ+ED ++SQMLN GA+M  PG  H 
Sbjct: 121 PALGAQSLMSTSSQSAQQLPYRNPYQNQHFNPPLYQDEDESSSQMLNPGANMVAPGFPHL 180

Query: 354 PVGMFGEMVFARVFGNSENLFAYPNSYQLMGS--NSSRLRRQEMQADKFLNRISVXXXXX 181
            VGMFGEM++ARVFGNSENL+ YPNSY L GS  NS RLRRQEMQA+K LNRIS+     
Sbjct: 181 VVGMFGEMLYARVFGNSENLYNYPNSYHLGGSNNNSPRLRRQEMQANKSLNRISIFLFCC 240

Query: 180 XXXXLIVF 157
               LIVF
Sbjct: 241 FLLCLIVF 248


Top