BLASTX nr result

ID: Glycyrrhiza23_contig00006274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006274
         (1151 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540320.1| PREDICTED: cyclin-U1-1-like [Glycine max]         365   1e-98
ref|XP_003597030.1| Cyclin-U1-1 [Medicago truncatula] gi|3554860...   363   3e-98
ref|NP_001235448.1| uncharacterized protein LOC100527137 [Glycin...   363   3e-98
gb|ABX10779.1| putative cyclin-dependent protein kinase [Glycine...   321   2e-85
ref|XP_002310464.1| predicted protein [Populus trichocarpa] gi|2...   299   8e-79

>ref|XP_003540320.1| PREDICTED: cyclin-U1-1-like [Glycine max]
          Length = 232

 Score =  365 bits (936), Expect = 1e-98
 Identities = 187/232 (80%), Positives = 199/232 (85%), Gaps = 3/232 (1%)
 Frame = +3

Query: 171 MLGASEYSSHGRQLQPATMAAELNLPRVLCVLSSTLEKLVARNEKLVDDLNQQLDGLSCG 350
           ML A +YS+HGR LQP T  AELNLPRVLCVLSS LEKLVARNEKL+D L+Q+LDGL+ G
Sbjct: 1   MLTAGDYSNHGRPLQPETSLAELNLPRVLCVLSSMLEKLVARNEKLIDILSQELDGLNSG 60

Query: 351 SVRLGKSLNAFHGVRAPGISIPKYLERIYKYTDCSPSCFVVGYVYIDRLTHRHPDSLVLS 530
           SVRLG SLN FHGVRAP ISIPKYLERIYKYT+CSPSCFVVGYVYIDRLTHRHPDSLV S
Sbjct: 61  SVRLGNSLNTFHGVRAPSISIPKYLERIYKYTNCSPSCFVVGYVYIDRLTHRHPDSLVTS 120

Query: 531 LNVHRLLVTSVMVASKMLDDEHYNNAVYARVGGVSNAXXXXXXXXXXXXXDFNVMVSSRV 710
           LNVHRLLVTSVMVASKMLDDEHYNNA+YARVGGVSNA             DF VMVSSRV
Sbjct: 121 LNVHRLLVTSVMVASKMLDDEHYNNAIYARVGGVSNAELNKLELELLFLLDFRVMVSSRV 180

Query: 711 FENYCLHLEKEMVVNGTGLKIERALTPKA---IETEISIEDSQSFSPPQIVD 857
           FE+YC HLEKEMVVNGTG+KIERALTPKA   +ETEISIED QS SPPQIV+
Sbjct: 181 FESYCFHLEKEMVVNGTGMKIERALTPKAMDDLETEISIEDKQSPSPPQIVE 232


>ref|XP_003597030.1| Cyclin-U1-1 [Medicago truncatula] gi|355486078|gb|AES67281.1|
           Cyclin-U1-1 [Medicago truncatula]
          Length = 233

 Score =  363 bits (933), Expect = 3e-98
 Identities = 185/230 (80%), Positives = 198/230 (86%)
 Frame = +3

Query: 171 MLGASEYSSHGRQLQPATMAAELNLPRVLCVLSSTLEKLVARNEKLVDDLNQQLDGLSCG 350
           ML ASEYS+H RQ QP T  AELNLPRVL +LSSTLEKLV+RNEKLVD+LNQ+LD L+ G
Sbjct: 1   MLTASEYSNHSRQNQPVTGPAELNLPRVLWILSSTLEKLVSRNEKLVDELNQELDKLNNG 60

Query: 351 SVRLGKSLNAFHGVRAPGISIPKYLERIYKYTDCSPSCFVVGYVYIDRLTHRHPDSLVLS 530
           SVRLGKSLN FHGVRAPGISIPKYLERIYKYT+CSPSCFVVGYVYID LTH+HPDSLVLS
Sbjct: 61  SVRLGKSLNLFHGVRAPGISIPKYLERIYKYTNCSPSCFVVGYVYIDMLTHKHPDSLVLS 120

Query: 531 LNVHRLLVTSVMVASKMLDDEHYNNAVYARVGGVSNAXXXXXXXXXXXXXDFNVMVSSRV 710
           LNVHRLLVTSVMVASKMLDDEHYNNAVYARVGGVSNA             DF VMV  RV
Sbjct: 121 LNVHRLLVTSVMVASKMLDDEHYNNAVYARVGGVSNAELNKLELELLFLLDFKVMVCPRV 180

Query: 711 FENYCLHLEKEMVVNGTGLKIERALTPKAIETEISIEDSQSFSPPQIVDY 860
           FE+YCLHLEKEM+VNGTGLKIER L+PK+ ETEIS+ED QS SPP IVDY
Sbjct: 181 FESYCLHLEKEMLVNGTGLKIERILSPKSFETEISVEDQQSSSPPPIVDY 230


>ref|NP_001235448.1| uncharacterized protein LOC100527137 [Glycine max]
           gi|255631636|gb|ACU16185.1| unknown [Glycine max]
          Length = 232

 Score =  363 bits (933), Expect = 3e-98
 Identities = 186/232 (80%), Positives = 196/232 (84%), Gaps = 3/232 (1%)
 Frame = +3

Query: 171 MLGASEYSSHGRQLQPATMAAELNLPRVLCVLSSTLEKLVARNEKLVDDLNQQLDGLSCG 350
           ML A EYS+H   LQP T   ELNLPRVLC+LSS LEKLVARNEKLVD L+QQLDGL+CG
Sbjct: 1   MLTAGEYSNHSWPLQPETSLTELNLPRVLCILSSMLEKLVARNEKLVDILSQQLDGLNCG 60

Query: 351 SVRLGKSLNAFHGVRAPGISIPKYLERIYKYTDCSPSCFVVGYVYIDRLTHRHPDSLVLS 530
           SVRLG SLN FHGVRAP ISIPKYLERIYKYT+CSPSCFVVGYVYIDRLTHRHPDSLV S
Sbjct: 61  SVRLGNSLNTFHGVRAPSISIPKYLERIYKYTNCSPSCFVVGYVYIDRLTHRHPDSLVTS 120

Query: 531 LNVHRLLVTSVMVASKMLDDEHYNNAVYARVGGVSNAXXXXXXXXXXXXXDFNVMVSSRV 710
           LNVHRLLVTSVMVASKMLDDEHYNNAVYARVGGVSN              DF VMVSSRV
Sbjct: 121 LNVHRLLVTSVMVASKMLDDEHYNNAVYARVGGVSNTELNKLELELLFLLDFRVMVSSRV 180

Query: 711 FENYCLHLEKEMVVNGTGLKIERALTPKA---IETEISIEDSQSFSPPQIVD 857
           FE+YC HLEKEMV+NGTG+KIERALTPKA   +ETEIS+ED QS SPPQIVD
Sbjct: 181 FESYCFHLEKEMVINGTGMKIERALTPKAMDDLETEISVEDKQSPSPPQIVD 232


>gb|ABX10779.1| putative cyclin-dependent protein kinase [Glycine max]
           gi|159902361|gb|ABX10780.1| putative cyclin-dependent
           protein kinase [Glycine soja]
          Length = 198

 Score =  321 bits (822), Expect = 2e-85
 Identities = 161/198 (81%), Positives = 170/198 (85%)
 Frame = +3

Query: 171 MLGASEYSSHGRQLQPATMAAELNLPRVLCVLSSTLEKLVARNEKLVDDLNQQLDGLSCG 350
           ML A +YS+HGR LQP T  AELNLPRVLCVLSS LEKLVARNEKL+D L+Q+LDGL+ G
Sbjct: 1   MLTAGDYSNHGRPLQPETSLAELNLPRVLCVLSSMLEKLVARNEKLIDILSQELDGLNSG 60

Query: 351 SVRLGKSLNAFHGVRAPGISIPKYLERIYKYTDCSPSCFVVGYVYIDRLTHRHPDSLVLS 530
           SVRLG SLN FHGVRAP ISIPKYLERIYKYT+CSPSCFVVGYVYIDRLTHRHPDSLV S
Sbjct: 61  SVRLGNSLNTFHGVRAPSISIPKYLERIYKYTNCSPSCFVVGYVYIDRLTHRHPDSLVTS 120

Query: 531 LNVHRLLVTSVMVASKMLDDEHYNNAVYARVGGVSNAXXXXXXXXXXXXXDFNVMVSSRV 710
           LNVHRLLVTSVMVASKMLDDEHYNNA+YARVGGVSNA             DF VMVSSRV
Sbjct: 121 LNVHRLLVTSVMVASKMLDDEHYNNAIYARVGGVSNAELNKLELELLFLLDFRVMVSSRV 180

Query: 711 FENYCLHLEKEMVVNGTG 764
           FE+YC HLEKEMVVNGTG
Sbjct: 181 FESYCFHLEKEMVVNGTG 198


>ref|XP_002310464.1| predicted protein [Populus trichocarpa] gi|222853367|gb|EEE90914.1|
           predicted protein [Populus trichocarpa]
          Length = 230

 Score =  299 bits (766), Expect = 8e-79
 Identities = 153/232 (65%), Positives = 184/232 (79%), Gaps = 3/232 (1%)
 Frame = +3

Query: 171 MLGASEYSSH-GRQLQPATMAAELNLPRVLCVLSSTLEKLVARNEKLVDDLNQQLDGLSC 347
           MLG+ + +S+  RQ +P+   +E   PRVL +LS  +EKLVARN+KLVDD++++LDG+S 
Sbjct: 1   MLGSGDLTSNLSRQSEPSP--SESTTPRVLTILSHVIEKLVARNDKLVDDMDKKLDGVSS 58

Query: 348 GSVRLGKSLNAFHGVRAPGISIPKYLERIYKYTDCSPSCFVVGYVYIDRLTHRHPDSLVL 527
           G  R+GKSLN FHGVRAP ISI KYLER+YKYT CSPSCFVVGYVYIDRLTH+HPDSLV+
Sbjct: 59  GLARVGKSLNVFHGVRAPNISIVKYLERLYKYTSCSPSCFVVGYVYIDRLTHKHPDSLVI 118

Query: 528 SLNVHRLLVTSVMVASKMLDDEHYNNAVYARVGGVSNAXXXXXXXXXXXXXDFNVMVSSR 707
           SLNVHRLLVTSVMVASKMLDD HYNNA YARVGGVSNA             DF V+VSSR
Sbjct: 119 SLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSNAELNRLEMEFLFLLDFGVVVSSR 178

Query: 708 VFENYCLHLEKEMVVNGTGLKIERALTPKAIE--TEISIEDSQSFSPPQIVD 857
           VFE+YC HLEKEM++NG   +IERA+   A++  TE+S+ED+QS SPPQ +D
Sbjct: 179 VFESYCSHLEKEMMINGASQRIERAIVSNAVDDVTELSVEDTQSSSPPQGMD 230


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