BLASTX nr result

ID: Glycyrrhiza23_contig00006259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006259
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133771.1| PREDICTED: protein transport protein Sec61 s...    91   1e-16
gb|AFK48843.1| unknown [Lotus japonicus]                               90   3e-16
gb|AFK44320.1| unknown [Lotus japonicus]                               90   3e-16
ref|XP_003517012.1| PREDICTED: protein transport protein Sec61 s...    89   4e-16
emb|CBI16600.3| unnamed protein product [Vitis vinifera]               88   1e-15

>ref|XP_004133771.1| PREDICTED: protein transport protein Sec61 subunit beta-like
           isoform 1 [Cucumis sativus]
           gi|449431968|ref|XP_004133772.1| PREDICTED: protein
           transport protein Sec61 subunit beta-like isoform 2
           [Cucumis sativus] gi|449431970|ref|XP_004133773.1|
           PREDICTED: protein transport protein Sec61 subunit
           beta-like isoform 3 [Cucumis sativus]
          Length = 82

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 52/83 (62%), Positives = 52/83 (62%)
 Frame = +3

Query: 162 MALGGGAPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQFYTDDAPGLKISPNVVLVMS 341
           MALGGG PQ                             LQFYTDDAPGLKISPNVVLVMS
Sbjct: 1   MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTM-LQFYTDDAPGLKISPNVVLVMS 59

Query: 342 IGFIAFVATLHVMGKLYFVRREA 410
           IGFIAFVA LHVMGKLYFVRREA
Sbjct: 60  IGFIAFVAVLHVMGKLYFVRREA 82


>gb|AFK48843.1| unknown [Lotus japonicus]
          Length = 82

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 52/83 (62%), Positives = 52/83 (62%)
 Frame = +3

Query: 162 MALGGGAPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQFYTDDAPGLKISPNVVLVMS 341
           MALGG APQ                             LQFYTDDAPGLKISPNVVLVMS
Sbjct: 1   MALGGAAPQRGSAAAAASMRRRRTTSGGASGGAAGTM-LQFYTDDAPGLKISPNVVLVMS 59

Query: 342 IGFIAFVATLHVMGKLYFVRREA 410
           IGFIAFVA LHVMGKLYFVRREA
Sbjct: 60  IGFIAFVAVLHVMGKLYFVRREA 82


>gb|AFK44320.1| unknown [Lotus japonicus]
          Length = 82

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 52/83 (62%), Positives = 52/83 (62%)
 Frame = +3

Query: 162 MALGGGAPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQFYTDDAPGLKISPNVVLVMS 341
           MALGGG PQ                             LQFYTDDAPGLKISPNVVLVMS
Sbjct: 1   MALGGGNPQRGSAAATASMRRRKPAGGAAAGGAAGNM-LQFYTDDAPGLKISPNVVLVMS 59

Query: 342 IGFIAFVATLHVMGKLYFVRREA 410
           IGFIAFVA LHVMGKLYFVRREA
Sbjct: 60  IGFIAFVAILHVMGKLYFVRREA 82


>ref|XP_003517012.1| PREDICTED: protein transport protein Sec61 subunit beta [Glycine
           max] gi|356506563|ref|XP_003522049.1| PREDICTED: protein
           transport protein Sec61 subunit beta-like [Glycine max]
           gi|255630067|gb|ACU15387.1| unknown [Glycine max]
          Length = 82

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 44/45 (97%), Positives = 44/45 (97%)
 Frame = +3

Query: 276 LQFYTDDAPGLKISPNVVLVMSIGFIAFVATLHVMGKLYFVRREA 410
           LQFYTDDAPGLKISPNVVLVMSIGFIAFVA LHVMGKLYFVRREA
Sbjct: 38  LQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA 82


>emb|CBI16600.3| unnamed protein product [Vitis vinifera]
          Length = 123

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = +3

Query: 276 LQFYTDDAPGLKISPNVVLVMSIGFIAFVATLHVMGKLYFVRREA 410
           LQFYTDDAPGLKISPNVVLVMSIGFIAFVA LHVMGKLYFVR+EA
Sbjct: 79  LQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRKEA 123


Top