BLASTX nr result

ID: Glycyrrhiza23_contig00006258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006258
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48843.1| unknown [Lotus japonicus]                               97   1e-18
ref|XP_004133771.1| PREDICTED: protein transport protein Sec61 s...    94   9e-18
gb|AFK44320.1| unknown [Lotus japonicus]                               94   1e-17
ref|XP_003517012.1| PREDICTED: protein transport protein Sec61 s...    94   1e-17
emb|CBI16595.3| unnamed protein product [Vitis vinifera]               93   3e-17

>gb|AFK48843.1| unknown [Lotus japonicus]
          Length = 82

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 53/82 (64%), Positives = 54/82 (65%)
 Frame = +1

Query: 79  MALGGAAPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQFYTDDAPGLKISPNVVLVMSI 258
           MALGGAAPQ                            LQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1   MALGGAAPQRGSAAAAASMRRRRTTSGGASGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 259 GFIAFVAILHVMGKLYFVRREA 324
           GFIAFVA+LHVMGKLYFVRREA
Sbjct: 61  GFIAFVAVLHVMGKLYFVRREA 82


>ref|XP_004133771.1| PREDICTED: protein transport protein Sec61 subunit beta-like
           isoform 1 [Cucumis sativus]
           gi|449431968|ref|XP_004133772.1| PREDICTED: protein
           transport protein Sec61 subunit beta-like isoform 2
           [Cucumis sativus] gi|449431970|ref|XP_004133773.1|
           PREDICTED: protein transport protein Sec61 subunit
           beta-like isoform 3 [Cucumis sativus]
          Length = 82

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 51/82 (62%), Positives = 52/82 (63%)
 Frame = +1

Query: 79  MALGGAAPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQFYTDDAPGLKISPNVVLVMSI 258
           MALGG  PQ                            LQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1   MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 259 GFIAFVAILHVMGKLYFVRREA 324
           GFIAFVA+LHVMGKLYFVRREA
Sbjct: 61  GFIAFVAVLHVMGKLYFVRREA 82


>gb|AFK44320.1| unknown [Lotus japonicus]
          Length = 82

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 52/82 (63%), Positives = 52/82 (63%)
 Frame = +1

Query: 79  MALGGAAPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQFYTDDAPGLKISPNVVLVMSI 258
           MALGG  PQ                            LQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1   MALGGGNPQRGSAAATASMRRRKPAGGAAAGGAAGNMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 259 GFIAFVAILHVMGKLYFVRREA 324
           GFIAFVAILHVMGKLYFVRREA
Sbjct: 61  GFIAFVAILHVMGKLYFVRREA 82


>ref|XP_003517012.1| PREDICTED: protein transport protein Sec61 subunit beta [Glycine
           max] gi|356506563|ref|XP_003522049.1| PREDICTED: protein
           transport protein Sec61 subunit beta-like [Glycine max]
           gi|255630067|gb|ACU15387.1| unknown [Glycine max]
          Length = 82

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 52/82 (63%), Positives = 52/82 (63%)
 Frame = +1

Query: 79  MALGGAAPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQFYTDDAPGLKISPNVVLVMSI 258
           MALGG AP                             LQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1   MALGGTAPPRGSAAATASMRRRRTTGGAASGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 259 GFIAFVAILHVMGKLYFVRREA 324
           GFIAFVAILHVMGKLYFVRREA
Sbjct: 61  GFIAFVAILHVMGKLYFVRREA 82


>emb|CBI16595.3| unnamed protein product [Vitis vinifera]
          Length = 112

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 52/87 (59%), Positives = 53/87 (60%)
 Frame = +1

Query: 64  LSPQKMALGGAAPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQFYTDDAPGLKISPNVV 243
           LS  KM   GAAP                             LQFYTDDAPGLKISPNVV
Sbjct: 26  LSASKMVQNGAAPPRGSAAAAASLRRRRTTSGGTAGVASGNMLQFYTDDAPGLKISPNVV 85

Query: 244 LVMSIGFIAFVAILHVMGKLYFVRREA 324
           LVMSIGFIAFVAILHVMGKLYFVR+EA
Sbjct: 86  LVMSIGFIAFVAILHVMGKLYFVRKEA 112


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