BLASTX nr result

ID: Glycyrrhiza23_contig00006253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006253
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519205.1| PREDICTED: transcription initiation factor I...   210   3e-52
ref|XP_003620976.1| Transcription initiation factor IIA subunit ...   210   3e-52
gb|AFK36634.1| unknown [Lotus japonicus]                              209   4e-52
emb|CBI19296.3| unnamed protein product [Vitis vinifera]              207   2e-51
ref|XP_002527359.1| transcription initiation factor iia (tfiia),...   206   4e-51

>ref|XP_003519205.1| PREDICTED: transcription initiation factor IIA subunit 2-like
           [Glycine max]
          Length = 106

 Score =  210 bits (534), Expect = 3e-52
 Identities = 104/106 (98%), Positives = 106/106 (100%)
 Frame = -3

Query: 638 MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALETQVKSKVSIK 459
           MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALETQVKSKVSIK
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALETQVKSKVSIK 60

Query: 458 GHLHTYRFCDNVWTFILQDALFKNEDTQENVGRVKIVACDSKLLSQ 321
           GHLHTYRFCDNVWTFILQDALFKNED+QENVGRVKIVACDSKLL+Q
Sbjct: 61  GHLHTYRFCDNVWTFILQDALFKNEDSQENVGRVKIVACDSKLLTQ 106


>ref|XP_003620976.1| Transcription initiation factor IIA subunit [Medicago truncatula]
           gi|217071430|gb|ACJ84075.1| unknown [Medicago
           truncatula] gi|355495991|gb|AES77194.1| Transcription
           initiation factor IIA subunit [Medicago truncatula]
           gi|388521381|gb|AFK48752.1| unknown [Medicago
           truncatula]
          Length = 106

 Score =  210 bits (534), Expect = 3e-52
 Identities = 104/106 (98%), Positives = 105/106 (99%)
 Frame = -3

Query: 638 MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALETQVKSKVSIK 459
           MATFELYRRSTIGMCLTETLDEMVQNGTLSPE+AIQVLVQFDKSMTEALETQVKSKVSIK
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPEIAIQVLVQFDKSMTEALETQVKSKVSIK 60

Query: 458 GHLHTYRFCDNVWTFILQDALFKNEDTQENVGRVKIVACDSKLLSQ 321
           GHLHTYRFCDNVWTFILQDALFKNED QENVGRVKIVACDSKLLSQ
Sbjct: 61  GHLHTYRFCDNVWTFILQDALFKNEDNQENVGRVKIVACDSKLLSQ 106


>gb|AFK36634.1| unknown [Lotus japonicus]
          Length = 106

 Score =  209 bits (533), Expect = 4e-52
 Identities = 104/106 (98%), Positives = 105/106 (99%)
 Frame = -3

Query: 638 MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALETQVKSKVSIK 459
           MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALETQVKSKVSIK
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALETQVKSKVSIK 60

Query: 458 GHLHTYRFCDNVWTFILQDALFKNEDTQENVGRVKIVACDSKLLSQ 321
           GHLHTYRFCDNVWTFILQDALFKNED QENVGRVKIVACDSKLL+Q
Sbjct: 61  GHLHTYRFCDNVWTFILQDALFKNEDNQENVGRVKIVACDSKLLTQ 106


>emb|CBI19296.3| unnamed protein product [Vitis vinifera]
          Length = 163

 Score =  207 bits (528), Expect = 2e-51
 Identities = 102/107 (95%), Positives = 107/107 (100%)
 Frame = -3

Query: 641 RMATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALETQVKSKVSI 462
           RMATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALE+QVKSKV+I
Sbjct: 57  RMATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTI 116

Query: 461 KGHLHTYRFCDNVWTFILQDALFKNEDTQENVGRVKIVACDSKLLSQ 321
           KGHLHTYRFCDNVWTFILQDALFKNE++QENVGRVKIVACDSKLL+Q
Sbjct: 117 KGHLHTYRFCDNVWTFILQDALFKNEESQENVGRVKIVACDSKLLTQ 163


>ref|XP_002527359.1| transcription initiation factor iia (tfiia), gamma chain, putative
           [Ricinus communis] gi|223533278|gb|EEF35031.1|
           transcription initiation factor iia (tfiia), gamma
           chain, putative [Ricinus communis]
          Length = 106

 Score =  206 bits (525), Expect = 4e-51
 Identities = 102/106 (96%), Positives = 106/106 (100%)
 Frame = -3

Query: 638 MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALETQVKSKVSIK 459
           MATFELYRRSTIGMCLTETLDEMVQ+GTLSPELAIQVLVQFDKSMTEALE+QVKSKVSIK
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQSGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIK 60

Query: 458 GHLHTYRFCDNVWTFILQDALFKNEDTQENVGRVKIVACDSKLLSQ 321
           GHLHTYRFCDNVWTFILQDALFKNED+QENVGRVKIVACDSKLL+Q
Sbjct: 61  GHLHTYRFCDNVWTFILQDALFKNEDSQENVGRVKIVACDSKLLTQ 106


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