BLASTX nr result

ID: Glycyrrhiza23_contig00006252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006252
         (1608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551498.1| PREDICTED: probable E3 ubiquitin-protein lig...   769   0.0  
ref|XP_003530222.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ...   758   0.0  
ref|XP_002524221.1| Serine/threonine-protein kinase Nek8, putati...   557   e-156
ref|XP_002282470.1| PREDICTED: X-linked retinitis pigmentosa GTP...   553   e-155
ref|XP_004166562.1| PREDICTED: probable E3 ubiquitin-protein lig...   550   e-154

>ref|XP_003551498.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
            max]
          Length = 525

 Score =  769 bits (1986), Expect = 0.0
 Identities = 378/473 (79%), Positives = 400/473 (84%)
 Frame = +1

Query: 10   VEEEECTEKMVYMWGYLPGASSEKAPILSPAPVCLSDPSLAGDSWKDVCGGGCGFAMAIS 189
            V+EEE  EKMVYMWGYLPGAS EK+PILSPAPV LSDPSLA DSWKDVCGGGCGFAM IS
Sbjct: 54   VKEEERAEKMVYMWGYLPGASPEKSPILSPAPVTLSDPSLAVDSWKDVCGGGCGFAMVIS 113

Query: 190  EKGKLVMWGSADDESQSYLTSGKHGEIPGPFQLPTEASVVKAAAGWAHCASVTEDGEVYA 369
            EKGKL+ WGSADDE QSYL SGKHGEIPG +QLPTEASVVKAAAGWAHCASVTE+GEVYA
Sbjct: 114  EKGKLITWGSADDEGQSYLISGKHGEIPGLYQLPTEASVVKAAAGWAHCASVTEEGEVYA 173

Query: 370  WGWKECVPSAKIITDLITVGSLQKEVAGKQSSSVAEXXXXXXXXXXXXXXXXXXXXXXXX 549
            WGWKECVPS K+ITD ITVGSLQK++AGKQSSS+AE                        
Sbjct: 174  WGWKECVPSGKVITDFITVGSLQKDIAGKQSSSIAEQGSPQSSNTSSGSDSHHDNKKVGD 233

Query: 550  XXXXXXXISFARQESDSQASGDDFFTVSPSLVPLGHGVKITSVAVGGRHTLALSDXXXXX 729
                   I+F+RQ+SDSQASGD+FFTVSPSLV LG+GVKITSV++GGRHTLALSD     
Sbjct: 234  EVVKRRKITFSRQDSDSQASGDEFFTVSPSLVTLGNGVKITSVSLGGRHTLALSDVGQVW 293

Query: 730  XXXXXXXXXXXXXSRVKMVSSPHLIPCIESASGKDRSSAFHQGSGAGAQGSNVPGSYVME 909
                         SRVKMVSSPHLIPCIESA GKD+SSAFHQGSGAGAQGSNV GSYVM+
Sbjct: 294  GWGYGGEGQLGLGSRVKMVSSPHLIPCIESA-GKDKSSAFHQGSGAGAQGSNVTGSYVMD 352

Query: 910  IACGGRHSAVITDAGALLTFGWGLYGQCGQGNNADQLSPTLVPSLLGTRVKNIAAGLWHT 1089
            I+CGGRHS VITDAGALLTFGWGLYGQCGQGNN DQL PTLVPSLLGTRV+ IAAGLWHT
Sbjct: 353  ISCGGRHSVVITDAGALLTFGWGLYGQCGQGNNVDQLRPTLVPSLLGTRVEKIAAGLWHT 412

Query: 1090 LCVTANGQIYAFGGNQFGQLGTGSDQPETSPRQLDASRFENKHSSIVSCGARHSALLTDD 1269
            LCVT NGQIYAFGGNQFGQLGTG+DQPETSPRQLDASRFENKHSSIVSCGARHSALLTDD
Sbjct: 413  LCVTVNGQIYAFGGNQFGQLGTGTDQPETSPRQLDASRFENKHSSIVSCGARHSALLTDD 472

Query: 1270 GHLFTWGWNKYGQLGLGDSVDRNIPCQVSIASCRPRNVACGWWHTLLMVDKPV 1428
            GHLFTWGWNKYGQLGLGDSVDRNIP QVSIA CRPRNVACGWWHTLL+ DK V
Sbjct: 473  GHLFTWGWNKYGQLGLGDSVDRNIPGQVSIAGCRPRNVACGWWHTLLLGDKTV 525


>ref|XP_003530222.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC3-like [Glycine max]
          Length = 528

 Score =  758 bits (1958), Expect = 0.0
 Identities = 379/476 (79%), Positives = 394/476 (82%), Gaps = 3/476 (0%)
 Frame = +1

Query: 10   VEEEECTEKMVYMWGYLPGASSEKAPILSPAPVCLSDPSLAGDSWKDVCGGGCGFAMAIS 189
            +EEEEC EKMVYMWGYLPGAS EK+PILSPAPV LSD SLAGDSWKDVCGGGCGFAMAIS
Sbjct: 54   LEEEECAEKMVYMWGYLPGASPEKSPILSPAPVNLSDRSLAGDSWKDVCGGGCGFAMAIS 113

Query: 190  EKGKLVMWGSADDESQSYLTSGKHGEIPGPFQLPTEASVVKAAAGWAHCASVTEDGEVYA 369
            EKGKL+ WGSADDE QSYL SGKHGEIPG +QLPTEASVVKAAAGWAHCASV E+GEVYA
Sbjct: 114  EKGKLITWGSADDEGQSYLISGKHGEIPGLYQLPTEASVVKAAAGWAHCASVNEEGEVYA 173

Query: 370  WGWKECVPSAKIITDLITVGSLQKEVAGKQSSSVA---EXXXXXXXXXXXXXXXXXXXXX 540
            WGWKECVPS K+ITD ITVGS QK+VAGKQ S                            
Sbjct: 174  WGWKECVPSGKVITDFITVGSFQKDVAGKQRSXWNFRHXTGSPQSSNTSSGSDSHHDNKK 233

Query: 541  XXXXXXXXXXISFARQESDSQASGDDFFTVSPSLVPLGHGVKITSVAVGGRHTLALSDXX 720
                      I+F+RQ+SDSQASGD+FFTVSPSLV L  GVKITSVAVGGRHTLALSD  
Sbjct: 234  VGDEVLKRRKITFSRQDSDSQASGDEFFTVSPSLVTLASGVKITSVAVGGRHTLALSDVG 293

Query: 721  XXXXXXXXXXXXXXXXSRVKMVSSPHLIPCIESASGKDRSSAFHQGSGAGAQGSNVPGSY 900
                            SRVKMVSSPHLIPCIES SGKD+SSAFHQGSGAGAQGSNV GSY
Sbjct: 294  QVWGWGYGGEGQLGLGSRVKMVSSPHLIPCIES-SGKDKSSAFHQGSGAGAQGSNVTGSY 352

Query: 901  VMEIACGGRHSAVITDAGALLTFGWGLYGQCGQGNNADQLSPTLVPSLLGTRVKNIAAGL 1080
            VM+IACGGRHS VITDAGALLTFGWGLYGQCGQGNNADQL PTLVPSLLGTRV+ IAAGL
Sbjct: 353  VMDIACGGRHSVVITDAGALLTFGWGLYGQCGQGNNADQLRPTLVPSLLGTRVEKIAAGL 412

Query: 1081 WHTLCVTANGQIYAFGGNQFGQLGTGSDQPETSPRQLDASRFENKHSSIVSCGARHSALL 1260
            WHTLCV+ NGQIYAFGGNQFGQLGTGSDQPETSPRQLDASRFENKHSSIVSCGARHSALL
Sbjct: 413  WHTLCVSVNGQIYAFGGNQFGQLGTGSDQPETSPRQLDASRFENKHSSIVSCGARHSALL 472

Query: 1261 TDDGHLFTWGWNKYGQLGLGDSVDRNIPCQVSIASCRPRNVACGWWHTLLMVDKPV 1428
            TDDGHLFTWGWNKYGQLGLGDSVDRNIP QVSIA CRPRNVACGWWHTLLM DK V
Sbjct: 473  TDDGHLFTWGWNKYGQLGLGDSVDRNIPGQVSIAGCRPRNVACGWWHTLLMGDKTV 528


>ref|XP_002524221.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis]
            gi|223536498|gb|EEF38145.1| Serine/threonine-protein
            kinase Nek8, putative [Ricinus communis]
          Length = 476

 Score =  557 bits (1435), Expect = e-156
 Identities = 270/471 (57%), Positives = 324/471 (68%), Gaps = 1/471 (0%)
 Frame = +1

Query: 16   EEECTEKMVYMWGYLPGASSEKAPILSPAPVCLSDPSLAGDSWKDVCGGGCGFAMAISEK 195
            EE   EK+V+MWGYLPGA  +++PILSP  V        G SWKDVCGGGCGFAMAISE 
Sbjct: 12   EEMVKEKLVFMWGYLPGALPQRSPILSPVVVRAD-----GYSWKDVCGGGCGFAMAISES 66

Query: 196  GKLVMWGSADDESQSYLTSGKHGEIPGPFQLPTEASVVKAAAGWAHCASVTEDGEVYAWG 375
            GKL+ WGS DD  QSY+TSGKHGEIP PF LPTEAS++KAAAGWAHC + T+ GEVY WG
Sbjct: 67   GKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIMKAAAGWAHCIAATDTGEVYTWG 126

Query: 376  WKECVPSAKIITDLITVGSLQKEVAGKQSSSVAEXXXXXXXXXXXXXXXXXXXXXXXXXX 555
            WKEC+PS K+  D    G  +K+V  + S  + E                          
Sbjct: 127  WKECIPSGKVFGDPSVAGGTEKDVFERHSPFLTE--QVSPRSQSSRSTGGIDGRGSGDES 184

Query: 556  XXXXXISFARQESDSQASGDDFFTVSPSLVPLGHGVKITSVAVGGRHTLALSDXXXXXXX 735
                 IS A+Q ++S +SGD+  +  P LV L  GV+IT+VA GGRHTLALSD       
Sbjct: 185  TKRRRISSAKQSAESSSSGDETLSALPCLVTLNPGVRITTVAAGGRHTLALSDIGQVWGW 244

Query: 736  XXXXXXXXXXXSRVKMVSSPHLIPCIESASGKDRSSAFHQGS-GAGAQGSNVPGSYVMEI 912
                       SR++MVSSPH +PC++ + GKDR + F +G   +   G  VPGSYV  I
Sbjct: 245  GYGGEGQLGLGSRIRMVSSPHPVPCVDPSYGKDRPAPFSRGGMTSEGHGFRVPGSYVKGI 304

Query: 913  ACGGRHSAVITDAGALLTFGWGLYGQCGQGNNADQLSPTLVPSLLGTRVKNIAAGLWHTL 1092
            ACGGRHSAVITDAGALLTFGWGLYGQCGQG+  D+LSP  V  LLG R+  +AAGLWHT+
Sbjct: 305  ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPICVSPLLGIRIAGVAAGLWHTI 364

Query: 1093 CVTANGQIYAFGGNQFGQLGTGSDQPETSPRQLDASRFENKHSSIVSCGARHSALLTDDG 1272
            CV+A+G +YAFGGNQFGQLGTGSDQ ET+PR LDA   E+ H+ +VSCGARHSA++ +DG
Sbjct: 365  CVSADGDVYAFGGNQFGQLGTGSDQAETTPRLLDAPSLEDIHAKVVSCGARHSAIVAEDG 424

Query: 1273 HLFTWGWNKYGQLGLGDSVDRNIPCQVSIASCRPRNVACGWWHTLLMVDKP 1425
             +F WGWNKYGQLGLGD +DRNIP  V+I  C PRNVACGWWHTLL+ + P
Sbjct: 425  KVFCWGWNKYGQLGLGDVIDRNIPSPVTIEGCIPRNVACGWWHTLLLAESP 475


>ref|XP_002282470.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Vitis
            vinifera]
          Length = 484

 Score =  553 bits (1424), Expect = e-155
 Identities = 275/477 (57%), Positives = 332/477 (69%), Gaps = 3/477 (0%)
 Frame = +1

Query: 4    KTVEEEECTEKMVYMWGYLPGASSEKAPILSPAPVCLSDPSLAGDSWKDVCGGGCGFAMA 183
            + V  E   EK+V+M GYLPGA  +++P+LSP  V  S  S+   +W+DVCGGGCGFAMA
Sbjct: 10   EAVVMEGVREKLVFMMGYLPGALPQRSPLLSPIAV-RSPASI--HAWRDVCGGGCGFAMA 66

Query: 184  ISEKGKLVMWGSADDESQSYLTSGKHGEIPGPFQLPTEASVVKAAAGWAHCASVTEDGEV 363
            ISE GKL+ WGS DD  QSY+TSGKHGE P PF LPTEAS+VKAAAGWAHCASVTE+GEV
Sbjct: 67   ISESGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCASVTENGEV 126

Query: 364  YAWGWKECVPSAKIITDLITVGSLQKEVAGKQSSSVAEXXXXXXXXXXXXXXXXXXXXXX 543
            Y WGWKECVPS K+  D    GSL+K+V  +QSS + E                      
Sbjct: 127  YTWGWKECVPSGKVFGDPSVGGSLEKDVFERQSSFLTEQVSPRTQGSRSTAGGVSGTDSK 186

Query: 544  XXXXXXXXXISF-ARQESDSQASGDDFFTVSPSLVPLGHGVKITSVAVGGRHTLALSDXX 720
                         + +++   +SGD+  +  P LV L  GV+I +VA GGRHTLALSD  
Sbjct: 187  GGGEESTKRRRMLSSKQAAESSSGDETLSALPCLVTLNPGVRIANVAAGGRHTLALSDVG 246

Query: 721  XXXXXXXXXXXXXXXXSRVKMVSSPHLIPCIESAS-GKDRSSAFHQGS-GAGAQGSNVPG 894
                            SR++MVSSPH +PC+ES+S GK+RSSA  +G+     Q   VPG
Sbjct: 247  QVWGWGYGGEGQLGLGSRIRMVSSPHPVPCVESSSYGKERSSALARGNVSTEGQSLRVPG 306

Query: 895  SYVMEIACGGRHSAVITDAGALLTFGWGLYGQCGQGNNADQLSPTLVPSLLGTRVKNIAA 1074
            SYV  IACGGRHSAVITDAGALL FGWGLYGQCGQG+  D+LSPT V SLLG +++ +AA
Sbjct: 307  SYVKWIACGGRHSAVITDAGALLMFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIERVAA 366

Query: 1075 GLWHTLCVTANGQIYAFGGNQFGQLGTGSDQPETSPRQLDASRFENKHSSIVSCGARHSA 1254
            GLWHT+C++A+G +Y FGGNQFGQLGTG DQPET PR LDA   EN H+ IVSCGARHSA
Sbjct: 367  GLWHTVCISADGDVYTFGGNQFGQLGTGVDQPETLPRLLDAPSLENAHAKIVSCGARHSA 426

Query: 1255 LLTDDGHLFTWGWNKYGQLGLGDSVDRNIPCQVSIASCRPRNVACGWWHTLLMVDKP 1425
            ++T DG +F+WGWNKYGQLGLGD VDRNIP QV++  C P+NVACGWWHTLL+ + P
Sbjct: 427  IITADGKMFSWGWNKYGQLGLGDVVDRNIPSQVTLDGCTPKNVACGWWHTLLLAESP 483


>ref|XP_004166562.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
            sativus]
          Length = 472

 Score =  550 bits (1416), Expect = e-154
 Identities = 270/464 (58%), Positives = 316/464 (68%), Gaps = 1/464 (0%)
 Frame = +1

Query: 31   EKMVYMWGYLPGASSEKAPILSPAPVCLSDPSLAGDSWKDVCGGGCGFAMAISEKGKLVM 210
            + +VYMWGYLPGA  +K+ +L P PV L      GDSWK+VCGGGCGFAMAIS+ GKL+ 
Sbjct: 6    DALVYMWGYLPGALPDKSLLLLPEPVRLPSSIDGGDSWKEVCGGGCGFAMAISDSGKLIT 65

Query: 211  WGSADDESQSYLTSGKHGEIPGPFQLPTEASVVKAAAGWAHCASVTEDGEVYAWGWKECV 390
            WG+AD+E Q +LTSGKHGEIP  F  PTE  VVKA AGWAHC SVTE GEVY WGW EC+
Sbjct: 66   WGAADEEGQIFLTSGKHGEIPEAFPFPTEDLVVKAVAGWAHCVSVTEAGEVYTWGWSECI 125

Query: 391  PSAKIITDLITVGSLQKEVAGKQSSSVAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 570
            PS K + DL   G L K+  GKQS + AE                               
Sbjct: 126  PSMKTLRDLAIGGGLLKDSTGKQSLTTAEQAGPQDSNGVDRMDSQLDNKRVGEETAKRRK 185

Query: 571  ISFARQESDSQASGDDFFTVSPSLVPLGHGVKITSVAVGGRHTLALSDXXXXXXXXXXXX 750
            I+  +++++  + GDD FT  P LV  G GVKI +VA GGRHTLALSD            
Sbjct: 186  INSVKEDTEISSPGDDLFTTLPCLVNFGPGVKIAAVAAGGRHTLALSDMGQVWGWGHGGE 245

Query: 751  XXXXXXSRVKMVSSPHLIPCIE-SASGKDRSSAFHQGSGAGAQGSNVPGSYVMEIACGGR 927
                  +RVKMVSSPH+IPCIE  AS KDRSS  +Q S A A    V G+YV  IACGGR
Sbjct: 246  GQLGLGTRVKMVSSPHIIPCIELPASAKDRSSVIYQASKAAA--GKVLGNYVKGIACGGR 303

Query: 928  HSAVITDAGALLTFGWGLYGQCGQGNNADQLSPTLVPSLLGTRVKNIAAGLWHTLCVTAN 1107
            HS V+TD GALLTFGWGLYGQCGQGN  D L PT V SL  T+V++I+AGLWHT+C+TA 
Sbjct: 304  HSVVVTDTGALLTFGWGLYGQCGQGNTNDLLRPTCVSSLSSTQVESISAGLWHTVCITAE 363

Query: 1108 GQIYAFGGNQFGQLGTGSDQPETSPRQLDASRFENKHSSIVSCGARHSALLTDDGHLFTW 1287
            G +YAFGGNQFGQLGTG+DQ ET PR LDA   E K +  VSCGARH+ +LTDDG LF+W
Sbjct: 364  GLVYAFGGNQFGQLGTGTDQGETIPRLLDAPILEGKCAKRVSCGARHNVVLTDDGQLFSW 423

Query: 1288 GWNKYGQLGLGDSVDRNIPCQVSIASCRPRNVACGWWHTLLMVD 1419
            GWNKYGQLGLGDS+DRNIP +VSI  C PRN+ CGWWHTL++ +
Sbjct: 424  GWNKYGQLGLGDSIDRNIPSKVSIDGCLPRNIVCGWWHTLMLAE 467


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