BLASTX nr result

ID: Glycyrrhiza23_contig00006220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006220
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   162   2e-38
ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   159   3e-37
ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   154   6e-36
emb|CBI38093.3| unnamed protein product [Vitis vinifera]              153   1e-35
ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   153   1e-35

>ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
          Length = 871

 Score =  162 bits (411), Expect = 2e-38
 Identities = 79/81 (97%), Positives = 81/81 (100%)
 Frame = +3

Query: 3   IFIKILFQELSEHLGIRLLNERLNDPTVQDSFESIFPKDNPKNTRFCINFFTSIGLGGLT 182
           IFIKILFQELSEHLGIRLLNERLNDPT+Q+SFESIFPKDNPKNTRFCINFFTSIGLGGLT
Sbjct: 749 IFIKILFQELSEHLGIRLLNERLNDPTMQESFESIFPKDNPKNTRFCINFFTSIGLGGLT 808

Query: 183 ENLREYLKNMPRLIMQQQKQV 245
           ENLREYLKNMPRLIMQQQKQV
Sbjct: 809 ENLREYLKNMPRLIMQQQKQV 829


>ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
          Length = 860

 Score =  159 bits (401), Expect = 3e-37
 Identities = 78/81 (96%), Positives = 80/81 (98%)
 Frame = +3

Query: 3   IFIKILFQELSEHLGIRLLNERLNDPTVQDSFESIFPKDNPKNTRFCINFFTSIGLGGLT 182
           IFIKILFQELSEHLGIRLLNERLND T+Q+SFESIFPKDNPKNTRFCINFFTSIGLGGLT
Sbjct: 732 IFIKILFQELSEHLGIRLLNERLNDLTMQESFESIFPKDNPKNTRFCINFFTSIGLGGLT 791

Query: 183 ENLREYLKNMPRLIMQQQKQV 245
           ENLREYLKNMPRLIMQQQKQV
Sbjct: 792 ENLREYLKNMPRLIMQQQKQV 812


>ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus]
          Length = 797

 Score =  154 bits (390), Expect = 6e-36
 Identities = 76/81 (93%), Positives = 78/81 (96%)
 Frame = +3

Query: 3   IFIKILFQELSEHLGIRLLNERLNDPTVQDSFESIFPKDNPKNTRFCINFFTSIGLGGLT 182
           IFIKILFQELSEHLGIRLLNERL DPT+QDSFESIFP+DNPKNTRF INFFTSIGLGGLT
Sbjct: 672 IFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLT 731

Query: 183 ENLREYLKNMPRLIMQQQKQV 245
           ENLREYLKNMPRLIMQQQK V
Sbjct: 732 ENLREYLKNMPRLIMQQQKPV 752


>emb|CBI38093.3| unnamed protein product [Vitis vinifera]
          Length = 2607

 Score =  153 bits (387), Expect = 1e-35
 Identities = 75/81 (92%), Positives = 78/81 (96%)
 Frame = +3

Query: 3    IFIKILFQELSEHLGIRLLNERLNDPTVQDSFESIFPKDNPKNTRFCINFFTSIGLGGLT 182
            IFIKILFQELSEHLGIRLLNERL DP++QDSFESIFPKDNPKNTRF INFFTSIGLGG+T
Sbjct: 2481 IFIKILFQELSEHLGIRLLNERLTDPSMQDSFESIFPKDNPKNTRFSINFFTSIGLGGIT 2540

Query: 183  ENLREYLKNMPRLIMQQQKQV 245
            ENLREYLKNMPRLIMQQQK V
Sbjct: 2541 ENLREYLKNMPRLIMQQQKPV 2561


>ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Vitis vinifera]
          Length = 785

 Score =  153 bits (387), Expect = 1e-35
 Identities = 75/81 (92%), Positives = 78/81 (96%)
 Frame = +3

Query: 3   IFIKILFQELSEHLGIRLLNERLNDPTVQDSFESIFPKDNPKNTRFCINFFTSIGLGGLT 182
           IFIKILFQELSEHLGIRLLNERL DP++QDSFESIFPKDNPKNTRF INFFTSIGLGG+T
Sbjct: 659 IFIKILFQELSEHLGIRLLNERLTDPSMQDSFESIFPKDNPKNTRFSINFFTSIGLGGIT 718

Query: 183 ENLREYLKNMPRLIMQQQKQV 245
           ENLREYLKNMPRLIMQQQK V
Sbjct: 719 ENLREYLKNMPRLIMQQQKPV 739


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