BLASTX nr result
ID: Glycyrrhiza23_contig00006154
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00006154
(1729 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003534438.1| PREDICTED: polypyrimidine tract-binding prot... 805 0.0
ref|XP_003552536.1| PREDICTED: polypyrimidine tract-binding prot... 803 0.0
ref|XP_003534440.1| PREDICTED: polypyrimidine tract-binding prot... 733 0.0
ref|XP_003552537.1| PREDICTED: polypyrimidine tract-binding prot... 731 0.0
ref|XP_003534439.1| PREDICTED: polypyrimidine tract-binding prot... 726 0.0
>ref|XP_003534438.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 1 [Glycine max]
Length = 496
Score = 805 bits (2078), Expect = 0.0
Identities = 411/498 (82%), Positives = 425/498 (85%), Gaps = 25/498 (5%)
Frame = +2
Query: 140 MSTSGQHQFRYTQTPSKVLHLRNLPWECIEEELVELCKPFGKIVNTKCNVGANRNQAFVE 319
MSTS QHQFRYTQTPSKVLHLRNLPWEC EEEL ELCKPFGKI+NTKCNVGANRNQAFVE
Sbjct: 1 MSTSNQHQFRYTQTPSKVLHLRNLPWECSEEELRELCKPFGKIINTKCNVGANRNQAFVE 60
Query: 320 FADLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKAPGDIPGNVLLVTIEGVE 499
FADLNQAISMVSYYASSSEPA VRGKTVYIQYSNRHEIVNNK+PGDIPGNVLLVTIEGVE
Sbjct: 61 FADLNQAISMVSYYASSSEPAMVRGKTVYIQYSNRHEIVNNKSPGDIPGNVLLVTIEGVE 120
Query: 500 AGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARNALDGRSIPRYLL 679
AGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSAR+ALDGRSIPRYLL
Sbjct: 121 AGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDALDGRSIPRYLL 180
Query: 680 PDHVGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPVNHTAIEGAAQPAIGPDGKKREP 859
P HVGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPVN+TAIEGA Q A+GPDGK++EP
Sbjct: 181 PAHVGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPVNYTAIEGAVQTAVGPDGKRKEP 240
Query: 860 ESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGHTQALIQYPDVITATAARE 1039
ESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNG TQALIQYPD+ITA+AARE
Sbjct: 241 ESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDIITASAARE 300
Query: 1040 ALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPSVLAAQVPATAWQNPQAA 1219
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPS+LAAQ P TAWQNPQAA
Sbjct: 301 ALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPSLLAAQGPPTAWQNPQAA 360
Query: 1220 PMYRASAPSFQTQVPGGQMPSWDPSLHAFRPRPGYVSVPGAFPVQT----------XXXX 1369
MY SAP++ TQVPGGQ+PSWDPSL A RP Y S PG FPVQT
Sbjct: 361 SMYPGSAPAYHTQVPGGQVPSWDPSLQAV--RPSYASAPGTFPVQTGAAPPMPSYAPASA 418
Query: 1370 XXXXXXXXXQGSPI-----PMGITQPGVSPNVNLQPSGASTSVPGSSP----------GA 1504
Q SP+ PMGI Q GV PNVNLQ SGAS S PGSSP
Sbjct: 419 MPVASSPHAQSSPMAHNANPMGIAQLGVPPNVNLQSSGASLSAPGSSPLMQTSQAAQGLL 478
Query: 1505 QPNVRPSSASPPGQHYYG 1558
QPN RP ASP GQHYYG
Sbjct: 479 QPNARPGGASPSGQHYYG 496
>ref|XP_003552536.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 1 [Glycine max]
Length = 496
Score = 803 bits (2074), Expect = 0.0
Identities = 408/498 (81%), Positives = 426/498 (85%), Gaps = 25/498 (5%)
Frame = +2
Query: 140 MSTSGQHQFRYTQTPSKVLHLRNLPWECIEEELVELCKPFGKIVNTKCNVGANRNQAFVE 319
MSTS QHQFRYTQTPSKVLHLRNLPWEC EEEL ELC+PFGKIVNTKCNVGANRNQAFVE
Sbjct: 1 MSTSSQHQFRYTQTPSKVLHLRNLPWECSEEELRELCRPFGKIVNTKCNVGANRNQAFVE 60
Query: 320 FADLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKAPGDIPGNVLLVTIEGVE 499
F DLNQAISMVSYYASSSEPA VRGKTVYIQYSNRHEIVNNK+PGDIPGNVLLVTIEGVE
Sbjct: 61 FVDLNQAISMVSYYASSSEPAMVRGKTVYIQYSNRHEIVNNKSPGDIPGNVLLVTIEGVE 120
Query: 500 AGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARNALDGRSIPRYLL 679
AGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSAR+ALDGRSIPRYLL
Sbjct: 121 AGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDALDGRSIPRYLL 180
Query: 680 PDHVGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPVNHTAIEGAAQPAIGPDGKKREP 859
P HVGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPVN+TAIEGA Q A+GPDGK++EP
Sbjct: 181 PAHVGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPVNYTAIEGAVQTAVGPDGKRKEP 240
Query: 860 ESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGHTQALIQYPDVITATAARE 1039
+SNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNG TQALIQYPD+ITA+AARE
Sbjct: 241 DSNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDIITASAARE 300
Query: 1040 ALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPSVLAAQVPATAWQNPQAA 1219
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPS+LAAQ PATAWQNPQAA
Sbjct: 301 ALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPSLLAAQGPATAWQNPQAA 360
Query: 1220 PMYRASAPSFQTQVPGGQMPSWDPSLHAFRPRPGYVSVPGAFPVQT----------XXXX 1369
PMY SAP++ TQVPGGQ+P+WDP+L A RP YVS PG F VQ+
Sbjct: 361 PMYPGSAPAYHTQVPGGQVPAWDPNLQAV--RPSYVSAPGTFHVQSGAAPPMPAYAPAAA 418
Query: 1370 XXXXXXXXXQGSPI-----PMGITQPGVSPNVNLQPSGASTSVPGSSP----------GA 1504
Q SP+ PMGI QP V PN NLQ SGAS S PGSSP
Sbjct: 419 MPAASSPHAQSSPMAHNANPMGIAQPRVPPNANLQSSGASLSAPGSSPLMQTSQAAQGLV 478
Query: 1505 QPNVRPSSASPPGQHYYG 1558
QPN RP ASPPGQHYYG
Sbjct: 479 QPNARPGGASPPGQHYYG 496
>ref|XP_003534440.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 3 [Glycine max]
Length = 467
Score = 733 bits (1892), Expect = 0.0
Identities = 382/498 (76%), Positives = 396/498 (79%), Gaps = 25/498 (5%)
Frame = +2
Query: 140 MSTSGQHQFRYTQTPSKVLHLRNLPWECIEEELVELCKPFGKIVNTKCNVGANRNQAFVE 319
MSTS QHQFRYTQTPSKVLHLRNLPWEC EEEL ELCKPFGKI+NTKCNVGANRNQAFVE
Sbjct: 1 MSTSNQHQFRYTQTPSKVLHLRNLPWECSEEELRELCKPFGKIINTKCNVGANRNQAFVE 60
Query: 320 FADLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKAPGDIPGNVLLVTIEGVE 499
FADLNQAISMVSYYASSSEPA VRGKTVYIQYSNRHEIVNNK+PGDIPGNVLLVTIEGVE
Sbjct: 61 FADLNQAISMVSYYASSSEPAMVRGKTVYIQYSNRHEIVNNKSPGDIPGNVLLVTIEGVE 120
Query: 500 AGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARNALDGRSIPRYLL 679
AGD ALIQFTDAETASSAR+ALDGRSIPRYLL
Sbjct: 121 AGD-----------------------------ALIQFTDAETASSARDALDGRSIPRYLL 151
Query: 680 PDHVGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPVNHTAIEGAAQPAIGPDGKKREP 859
P HVGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPVN+TAIEGA Q A+GPDGK++EP
Sbjct: 152 PAHVGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPVNYTAIEGAVQTAVGPDGKRKEP 211
Query: 860 ESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGHTQALIQYPDVITATAARE 1039
ESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNG TQALIQYPD+ITA+AARE
Sbjct: 212 ESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDIITASAARE 271
Query: 1040 ALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPSVLAAQVPATAWQNPQAA 1219
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPS+LAAQ P TAWQNPQAA
Sbjct: 272 ALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPSLLAAQGPPTAWQNPQAA 331
Query: 1220 PMYRASAPSFQTQVPGGQMPSWDPSLHAFRPRPGYVSVPGAFPVQT----------XXXX 1369
MY SAP++ TQVPGGQ+PSWDPSL A RP Y S PG FPVQT
Sbjct: 332 SMYPGSAPAYHTQVPGGQVPSWDPSLQAV--RPSYASAPGTFPVQTGAAPPMPSYAPASA 389
Query: 1370 XXXXXXXXXQGSPI-----PMGITQPGVSPNVNLQPSGASTSVPGSSP----------GA 1504
Q SP+ PMGI Q GV PNVNLQ SGAS S PGSSP
Sbjct: 390 MPVASSPHAQSSPMAHNANPMGIAQLGVPPNVNLQSSGASLSAPGSSPLMQTSQAAQGLL 449
Query: 1505 QPNVRPSSASPPGQHYYG 1558
QPN RP ASP GQHYYG
Sbjct: 450 QPNARPGGASPSGQHYYG 467
>ref|XP_003552537.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 2 [Glycine max]
Length = 467
Score = 731 bits (1888), Expect = 0.0
Identities = 379/498 (76%), Positives = 397/498 (79%), Gaps = 25/498 (5%)
Frame = +2
Query: 140 MSTSGQHQFRYTQTPSKVLHLRNLPWECIEEELVELCKPFGKIVNTKCNVGANRNQAFVE 319
MSTS QHQFRYTQTPSKVLHLRNLPWEC EEEL ELC+PFGKIVNTKCNVGANRNQAFVE
Sbjct: 1 MSTSSQHQFRYTQTPSKVLHLRNLPWECSEEELRELCRPFGKIVNTKCNVGANRNQAFVE 60
Query: 320 FADLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKAPGDIPGNVLLVTIEGVE 499
F DLNQAISMVSYYASSSEPA VRGKTVYIQYSNRHEIVNNK+PGDIPGNVLLVTIEGVE
Sbjct: 61 FVDLNQAISMVSYYASSSEPAMVRGKTVYIQYSNRHEIVNNKSPGDIPGNVLLVTIEGVE 120
Query: 500 AGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARNALDGRSIPRYLL 679
AGD ALIQFTDAETASSAR+ALDGRSIPRYLL
Sbjct: 121 AGD-----------------------------ALIQFTDAETASSARDALDGRSIPRYLL 151
Query: 680 PDHVGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPVNHTAIEGAAQPAIGPDGKKREP 859
P HVGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPVN+TAIEGA Q A+GPDGK++EP
Sbjct: 152 PAHVGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPVNYTAIEGAVQTAVGPDGKRKEP 211
Query: 860 ESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGHTQALIQYPDVITATAARE 1039
+SNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNG TQALIQYPD+ITA+AARE
Sbjct: 212 DSNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDIITASAARE 271
Query: 1040 ALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPSVLAAQVPATAWQNPQAA 1219
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPS+LAAQ PATAWQNPQAA
Sbjct: 272 ALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPSLLAAQGPATAWQNPQAA 331
Query: 1220 PMYRASAPSFQTQVPGGQMPSWDPSLHAFRPRPGYVSVPGAFPVQT----------XXXX 1369
PMY SAP++ TQVPGGQ+P+WDP+L A RP YVS PG F VQ+
Sbjct: 332 PMYPGSAPAYHTQVPGGQVPAWDPNLQAV--RPSYVSAPGTFHVQSGAAPPMPAYAPAAA 389
Query: 1370 XXXXXXXXXQGSPI-----PMGITQPGVSPNVNLQPSGASTSVPGSSP----------GA 1504
Q SP+ PMGI QP V PN NLQ SGAS S PGSSP
Sbjct: 390 MPAASSPHAQSSPMAHNANPMGIAQPRVPPNANLQSSGASLSAPGSSPLMQTSQAAQGLV 449
Query: 1505 QPNVRPSSASPPGQHYYG 1558
QPN RP ASPPGQHYYG
Sbjct: 450 QPNARPGGASPPGQHYYG 467
>ref|XP_003534439.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 2 [Glycine max]
Length = 505
Score = 726 bits (1873), Expect = 0.0
Identities = 386/510 (75%), Positives = 404/510 (79%), Gaps = 37/510 (7%)
Frame = +2
Query: 140 MSTSGQHQFRYTQTPSKVLHLRNLPWECIEEELVELCKPFGKIVNTKCNVGANRNQAFVE 319
MSTS QHQFRYTQTPSKVLHLRNLPWEC EEEL ELCKPFGKI+NTKCNVGANRNQAFVE
Sbjct: 1 MSTSNQHQFRYTQTPSKVLHLRNLPWECSEEELRELCKPFGKIINTKCNVGANRNQAFVE 60
Query: 320 FADLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKAPGDIPGNVLLVTIEGVE 499
FADLNQAISMVSYYASSSEPA VRGKTVYIQYSNRHEIVNNK+PGDIPGNVLLVTIEGVE
Sbjct: 61 FADLNQAISMVSYYASSSEPAMVRGKTVYIQYSNRHEIVNNKSPGDIPGNVLLVTIEGVE 120
Query: 500 AGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARNALDGRSIPRYLL 679
AGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSAR+ALDGRSIPR +
Sbjct: 121 AGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDALDGRSIPRQVA 180
Query: 680 ----------PDH--VGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPVNHTAIEGAAQ 823
P V +C + I+ H I DYTNPMLPVN+TAIEGA Q
Sbjct: 181 LFVFFPYSSTPSIILVIACQV-INLLTHLFFGICLM--HFLDYTNPMLPVNYTAIEGAVQ 237
Query: 824 PAIGPDGKKREPESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGHTQALIQ 1003
A+GPDGK++EPESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNG TQALIQ
Sbjct: 238 TAVGPDGKRKEPESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQ 297
Query: 1004 YPDVITATAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPSVLAAQ 1183
YPD+ITA+AAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPS+LAAQ
Sbjct: 298 YPDIITASAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPSLLAAQ 357
Query: 1184 VPATAWQNPQAAPMYRASAPSFQTQVPGGQMPSWDPSLHAFRPRPGYVSVPGAFPVQT-- 1357
P TAWQNPQAA MY SAP++ TQVPGGQ+PSWDPSL A RP Y S PG FPVQT
Sbjct: 358 GPPTAWQNPQAASMYPGSAPAYHTQVPGGQVPSWDPSLQAV--RPSYASAPGTFPVQTGA 415
Query: 1358 --------XXXXXXXXXXXXXQGSPI-----PMGITQPGVSPNVNLQPSGASTSVPGSSP 1498
Q SP+ PMGI Q GV PNVNLQ SGAS S PGSSP
Sbjct: 416 APPMPSYAPASAMPVASSPHAQSSPMAHNANPMGIAQLGVPPNVNLQSSGASLSAPGSSP 475
Query: 1499 ----------GAQPNVRPSSASPPGQHYYG 1558
QPN RP ASP GQHYYG
Sbjct: 476 LMQTSQAAQGLLQPNARPGGASPSGQHYYG 505