BLASTX nr result

ID: Glycyrrhiza23_contig00006146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006146
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]   267   6e-70
ref|XP_003537980.1| PREDICTED: pumilio homolog 2-like [Glycine max]   261   4e-68
ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vin...   261   4e-68
emb|CBI16096.3| unnamed protein product [Vitis vinifera]              261   4e-68
emb|CAN61602.1| hypothetical protein VITISV_024967 [Vitis vinifera]   261   4e-68

>ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1054

 Score =  267 bits (683), Expect = 6e-70
 Identities = 136/141 (96%), Positives = 137/141 (97%)
 Frame = -1

Query: 424  TQQKVMDEILGEVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFASN 245
            TQQKVMDEILG VSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFASN
Sbjct: 893  TQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFASN 952

Query: 244  VVEKCLTFGSLSERQLLVNEMLGSIDENEPLQAMMKDQFANYVVQKVLETCDDQQRELIL 65
            VVEKCLTFG  SERQLLVNEMLGS DENEPLQAMMKDQFANYVVQKVLETCDDQQRELIL
Sbjct: 953  VVEKCLTFGGPSERQLLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELIL 1012

Query: 64   SRIKVYLNALKKYTYGKHIVA 2
            SRIKV+LNALKKYTYGKHIVA
Sbjct: 1013 SRIKVHLNALKKYTYGKHIVA 1033



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
 Frame = -1

Query: 424  TQQK--VMDEILGEVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFA 251
            T++K  V  EI+ +   L  D +GNYVVQ   EHG   +R  +  +L   ++ +S Q + 
Sbjct: 746  TEEKNMVYQEIMPQALALMTDVFGNYVVQKFFEHGLASQRRELANKLFEHVLTLSLQMYG 805

Query: 250  SNVVEKCLTFGSLSERQLLVNEMLGSIDENEPLQAMMKDQFANYVVQKVLETCDDQQREL 71
              V++K +    L ++  +V E+ G+I         ++DQ  N+V+QK +E   +     
Sbjct: 806  CRVIQKAIEVVDLDQKIKMVQELDGNI------MRCVRDQNGNHVIQKCIECVPEDAINF 859

Query: 70   ILSRIKVYLNALKKYTYGKHIV 5
            I+S     +  L  + YG  ++
Sbjct: 860  IVSTFFDQVVTLSTHPYGCRVI 881


>ref|XP_003537980.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1047

 Score =  261 bits (667), Expect = 4e-68
 Identities = 132/140 (94%), Positives = 135/140 (96%)
 Frame = -1

Query: 424  TQQKVMDEILGEVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFASN 245
            TQQKVMDEILG VSMLAQDQYGNYVVQHVLEHGKPHERS IIKELAGKIVQMSQQKFASN
Sbjct: 885  TQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSCIIKELAGKIVQMSQQKFASN 944

Query: 244  VVEKCLTFGSLSERQLLVNEMLGSIDENEPLQAMMKDQFANYVVQKVLETCDDQQRELIL 65
            VVEKCLTFG  SERQLLV+EMLG+ DENEPLQAMMKDQFANYVVQKVLETCDDQQRELIL
Sbjct: 945  VVEKCLTFGGPSERQLLVSEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELIL 1004

Query: 64   SRIKVYLNALKKYTYGKHIV 5
            SRIKV+LNALKKYTYGKHIV
Sbjct: 1005 SRIKVHLNALKKYTYGKHIV 1024



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
 Frame = -1

Query: 424  TQQK--VMDEILGEVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFA 251
            T++K  V  EI+     L  D +GNYVVQ   EHG   +R  +  +L G ++ +S Q + 
Sbjct: 738  TEEKNMVYQEIMPHSLALMTDVFGNYVVQKFFEHGLASQRRELANKLLGHVLTLSLQMYG 797

Query: 250  SNVVEKCLTFGSLSERQLLVNEMLGSIDENEPLQAMMKDQFANYVVQKVLETCDDQQREL 71
              V++K +    L ++  +V E+ G++         ++DQ  N+V+QK +E   +     
Sbjct: 798  CRVIQKAIEVVDLDQKIEMVQELDGNV------MRCVRDQNGNHVIQKCIECVPEDAIHF 851

Query: 70   ILSRIKVYLNALKKYTYGKHIV 5
            I+S     +  L  + YG  ++
Sbjct: 852  IVSTFFDQVVTLSTHPYGCRVI 873


>ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
          Length = 1065

 Score =  261 bits (667), Expect = 4e-68
 Identities = 131/141 (92%), Positives = 136/141 (96%)
 Frame = -1

Query: 424  TQQKVMDEILGEVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFASN 245
            TQ KVMDEILG VSMLAQDQYGNYVVQHVLEHG+PHERSAIIKELAGKIVQMSQQKFASN
Sbjct: 904  TQSKVMDEILGSVSMLAQDQYGNYVVQHVLEHGQPHERSAIIKELAGKIVQMSQQKFASN 963

Query: 244  VVEKCLTFGSLSERQLLVNEMLGSIDENEPLQAMMKDQFANYVVQKVLETCDDQQRELIL 65
            VVEKCLTFG  +ERQ+LVNEMLG+ DENEPLQAMMKDQFANYVVQKVLETCDDQQRELIL
Sbjct: 964  VVEKCLTFGGPAERQILVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELIL 1023

Query: 64   SRIKVYLNALKKYTYGKHIVA 2
            SRIKV+LNALKKYTYGKHIVA
Sbjct: 1024 SRIKVHLNALKKYTYGKHIVA 1044



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
 Frame = -1

Query: 424  TQQK--VMDEILGEVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFA 251
            T++K  V  EI+ +   L  D +GNYV+Q   EHG   +R  +  +L G ++ +S Q + 
Sbjct: 757  TEEKNMVYQEIIPQALSLMTDVFGNYVIQKFFEHGLVSQRRELAGKLYGHVLTLSLQMYG 816

Query: 250  SNVVEKCLTFGSLSERQLLVNEMLGSIDENEPLQAMMKDQFANYVVQKVLETCDDQQREL 71
              V++K +      ++  +V E+ G I         ++DQ  N+V+QK +E   +   + 
Sbjct: 817  CRVIQKAIEVVDPDQKIKMVEELDGHI------MRCVRDQNGNHVIQKCIECVPEDAIQF 870

Query: 70   ILSRIKVYLNALKKYTYGKHIV 5
            I+S     +  L  + YG  ++
Sbjct: 871  IISTFFDQVVTLSTHPYGCRVI 892


>emb|CBI16096.3| unnamed protein product [Vitis vinifera]
          Length = 360

 Score =  261 bits (667), Expect = 4e-68
 Identities = 131/141 (92%), Positives = 136/141 (96%)
 Frame = -1

Query: 424 TQQKVMDEILGEVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFASN 245
           TQ KVMDEILG VSMLAQDQYGNYVVQHVLEHG+PHERSAIIKELAGKIVQMSQQKFASN
Sbjct: 199 TQSKVMDEILGSVSMLAQDQYGNYVVQHVLEHGQPHERSAIIKELAGKIVQMSQQKFASN 258

Query: 244 VVEKCLTFGSLSERQLLVNEMLGSIDENEPLQAMMKDQFANYVVQKVLETCDDQQRELIL 65
           VVEKCLTFG  +ERQ+LVNEMLG+ DENEPLQAMMKDQFANYVVQKVLETCDDQQRELIL
Sbjct: 259 VVEKCLTFGGPAERQILVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELIL 318

Query: 64  SRIKVYLNALKKYTYGKHIVA 2
           SRIKV+LNALKKYTYGKHIVA
Sbjct: 319 SRIKVHLNALKKYTYGKHIVA 339



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
 Frame = -1

Query: 424 TQQK--VMDEILGEVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFA 251
           T++K  V  EI+ +   L  D +GNYV+Q   EHG   +R  +  +L G ++ +S Q + 
Sbjct: 52  TEEKNMVYQEIIPQALSLMTDVFGNYVIQKFFEHGLVSQRRELAGKLYGHVLTLSLQMYG 111

Query: 250 SNVVEKCLTFGSLSERQLLVNEMLGSIDENEPLQAMMKDQFANYVVQKVLETCDDQQREL 71
             V++K +      ++  +V E+ G I         ++DQ  N+V+QK +E   +   + 
Sbjct: 112 CRVIQKAIEVVDPDQKIKMVEELDGHI------MRCVRDQNGNHVIQKCIECVPEDAIQF 165

Query: 70  ILSRIKVYLNALKKYTYGKHIV 5
           I+S     +  L  + YG  ++
Sbjct: 166 IISTFFDQVVTLSTHPYGCRVI 187


>emb|CAN61602.1| hypothetical protein VITISV_024967 [Vitis vinifera]
          Length = 1039

 Score =  261 bits (667), Expect = 4e-68
 Identities = 131/141 (92%), Positives = 136/141 (96%)
 Frame = -1

Query: 424  TQQKVMDEILGEVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFASN 245
            TQ KVMDEILG VSMLAQDQYGNYVVQHVLEHG+PHERSAIIKELAGKIVQMSQQKFASN
Sbjct: 878  TQSKVMDEILGSVSMLAQDQYGNYVVQHVLEHGQPHERSAIIKELAGKIVQMSQQKFASN 937

Query: 244  VVEKCLTFGSLSERQLLVNEMLGSIDENEPLQAMMKDQFANYVVQKVLETCDDQQRELIL 65
            VVEKCLTFG  +ERQ+LVNEMLG+ DENEPLQAMMKDQFANYVVQKVLETCDDQQRELIL
Sbjct: 938  VVEKCLTFGGPAERQILVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELIL 997

Query: 64   SRIKVYLNALKKYTYGKHIVA 2
            SRIKV+LNALKKYTYGKHIVA
Sbjct: 998  SRIKVHLNALKKYTYGKHIVA 1018



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
 Frame = -1

Query: 424  TQQK--VMDEILGEVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFA 251
            T++K  V  EI+ +   L  D +GNYV+Q   EHG   +R  +  +L G ++ +S Q + 
Sbjct: 731  TEEKNMVYQEIIPQALSLMTDVFGNYVIQKFFEHGLVSQRRELAGKLYGHVLTLSLQMYG 790

Query: 250  SNVVEKCLTFGSLSERQLLVNEMLGSIDENEPLQAMMKDQFANYVVQKVLETCDDQQREL 71
              V++K +      ++  +V E+ G I         ++DQ  N+V+QK +E   +   + 
Sbjct: 791  CRVIQKAIEVVDPDQKIKMVEELDGHI------MRCVRDQNGNHVIQKCIECVPEDAIQF 844

Query: 70   ILSRIKVYLNALKKYTYGKHIV 5
            I+S     +  L  + YG  ++
Sbjct: 845  IISTFFDQVVTLSTHPYGCRVI 866


Top