BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006126
         (1797 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis ...    77   1e-11
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...    77   1e-11
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...    77   1e-11
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    77   2e-11
gb|ABK28206.1| unknown [Arabidopsis thaliana]                          75   4e-11

>ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis thaliana]
            gi|6682231|gb|AAF23283.1|AC016661_8 putative non-LTR
            reverse transcriptase [Arabidopsis thaliana]
            gi|332641254|gb|AEE74775.1| RNase H domain-containing
            protein [Arabidopsis thaliana]
          Length = 484

 Score = 77.0 bits (188), Expect = 1e-11
 Identities = 60/197 (30%), Positives = 83/197 (42%), Gaps = 4/197 (2%)
 Frame = +1

Query: 616  LWSIWKHRNSYVFEHTRPNPMATVFQANLITKDYADYAA---KLPRRERVQFVQNQPSVR 786
            +W IWK RN+ VF   R +P  TV  A   T D+ +      K P   R Q  +N+  + 
Sbjct: 269  IWRIWKARNNVVFNKFRESPSKTVLSAKAETHDWLNATQSHKKTPSPTR-QIAENK--IE 325

Query: 787  WRPPNVDVVKVNTDASFNRHSNIACVGVIARDFKGH-ILFGITKKFPATSPXXXXXXXXX 963
            WR P    VK N DA F+     A  G I R+  G  I +G  K    ++P         
Sbjct: 326  WRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKALL 385

Query: 964  XXXXXXSNFGVTRVLFENDNLNLINACRGEDKWGEIQTIIQDISLYKTHFQKVGFTWVEI 1143
                     G T+V  E D   LIN   G      +   ++DIS +   F  + F ++  
Sbjct: 386  AALQQTWIRGYTQVFMEGDCQTLINLINGISFHSSLANHLEDISFWANKFASIQFGFIRR 445

Query: 1144 RGNAVAHQLAHLAMTNS 1194
            +GN +AH LA    T S
Sbjct: 446  KGNKLAHVLAKYGCTYS 462


>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1524

 Score = 77.0 bits (188), Expect = 1e-11
 Identities = 60/197 (30%), Positives = 83/197 (42%), Gaps = 4/197 (2%)
 Frame = +1

Query: 616  LWSIWKHRNSYVFEHTRPNPMATVFQANLITKDYADYAA---KLPRRERVQFVQNQPSVR 786
            +W IWK RN+ VF   R +P  TV  A   T D+ +      K P   R Q  +N+  + 
Sbjct: 1309 IWRIWKARNNVVFNKFRESPSKTVLSAKAETHDWLNATQSHKKTPSPTR-QIAENK--IE 1365

Query: 787  WRPPNVDVVKVNTDASFNRHSNIACVGVIARDFKGH-ILFGITKKFPATSPXXXXXXXXX 963
            WR P    VK N DA F+     A  G I R+  G  I +G  K    ++P         
Sbjct: 1366 WRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKALL 1425

Query: 964  XXXXXXSNFGVTRVLFENDNLNLINACRGEDKWGEIQTIIQDISLYKTHFQKVGFTWVEI 1143
                     G T+V  E D   LIN   G      +   ++DIS +   F  + F ++  
Sbjct: 1426 AALQQTWIRGYTQVFMEGDCQTLINLINGISFHSSLANHLEDISFWANKFASIQFGFIRR 1485

Query: 1144 RGNAVAHQLAHLAMTNS 1194
            +GN +AH LA    T S
Sbjct: 1486 KGNKLAHVLAKYGCTYS 1502


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score = 77.0 bits (188), Expect = 1e-11
 Identities = 60/197 (30%), Positives = 83/197 (42%), Gaps = 4/197 (2%)
 Frame = +1

Query: 616  LWSIWKHRNSYVFEHTRPNPMATVFQANLITKDYADYAA---KLPRRERVQFVQNQPSVR 786
            +W IWK RN+ VF   R +P  TV  A   T D+ +      K P   R Q  +N+  + 
Sbjct: 1535 IWRIWKARNNVVFNKFRESPSKTVLSAKAETHDWLNATQSHKKTPSPTR-QIAENK--IE 1591

Query: 787  WRPPNVDVVKVNTDASFNRHSNIACVGVIARDFKGH-ILFGITKKFPATSPXXXXXXXXX 963
            WR P    VK N DA F+     A  G I R+  G  I +G  K    ++P         
Sbjct: 1592 WRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKALL 1651

Query: 964  XXXXXXSNFGVTRVLFENDNLNLINACRGEDKWGEIQTIIQDISLYKTHFQKVGFTWVEI 1143
                     G T+V  E D   LIN   G      +   ++DIS +   F  + F ++  
Sbjct: 1652 AALQQTWIRGYTQVFMEGDCQTLINLINGISFHSSLANHLEDISFWANKFASIQFGFIRK 1711

Query: 1144 RGNAVAHQLAHLAMTNS 1194
            +GN +AH LA    T S
Sbjct: 1712 KGNKLAHVLAKYGCTYS 1728


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 65/217 (29%), Positives = 100/217 (46%), Gaps = 4/217 (1%)
 Frame = +1

Query: 616  LWSIWKHRNSYVFEHTRPNPMATVFQANLI--TKDYADYAAKLPRRERVQFVQNQPSVRW 789
            LW++W  RN  VFEHT  +  ATV    ++   +D+ +YA K+    R     + PS RW
Sbjct: 1143 LWNVWVERNRRVFEHT--SQPATVVGQRIMRQVEDFNNYAVKIYGGMRSSAALS-PS-RW 1198

Query: 790  RPPNVDVVKVNTDASFNRHSNIACVGVIARDFKGHILFGITKKFPATSPXXXXXXXXXXX 969
              P V  +K+NTDAS      +  +GVIARD +G + F  T++  A  P           
Sbjct: 1199 YAPPVGAIKLNTDASLAEEGWVG-LGVIARDSEGKVCFAATRRVRAYWPPEVAECKAIYM 1257

Query: 970  XXXXSN-FGVTRVLFENDNLNLI-NACRGEDKWGEIQTIIQDISLYKTHFQKVGFTWVEI 1143
                +   G   V+FE+D+L       +    + ++  I+ DI      F  V F+ V+ 
Sbjct: 1258 ATRLAQAHGYGDVIFESDSLVATKRLTKAAIFFSDLDAILGDILSMCNAFSSVSFSHVKR 1317

Query: 1144 RGNAVAHQLAHLAMTNSLPLHWRWSTPPSL*DLIVAD 1254
             GN VAH LA + +   +   W    P S+   ++ D
Sbjct: 1318 DGNTVAHNLARV-VPFGVEQCWEHHCPSSVTPYVLMD 1353


>gb|ABK28206.1| unknown [Arabidopsis thaliana]
          Length = 293

 Score = 75.5 bits (184), Expect = 4e-11
 Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 3/196 (1%)
 Frame = +1

Query: 616  LWSIWKHRNSYVFEHTRPNPMATVFQANLITKDYADYAAK--LPRRERVQFVQNQPSVRW 789
            LW +WK RN  +F+    +    + +A    +D+ +++ +  L  +     V+   SV+W
Sbjct: 81   LWRLWKSRNELMFKGKEYDAPEVLRRA---MEDFEEWSTRRELEGKASGPQVERNLSVQW 137

Query: 790  RPPNVDVVKVNTDASFNRHSNIACVGVIARDFKGHILFGITKKFPAT-SPXXXXXXXXXX 966
            + P    VK NTDA++   +    +G I R+  G +L+   +  P T +           
Sbjct: 138  KAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVLEAELEALRW 197

Query: 967  XXXXXSNFGVTRVLFENDNLNLINACRGEDKWGEIQTIIQDISLYKTHFQKVGFTWVEIR 1146
                 S F   R++FE+D   L+N    +D W  +Q  ++DI     HF++V F +    
Sbjct: 198  AVLTMSRFNYKRIIFESDAQALVNLLNSDDFWPTLQPALEDIQQLLHHFEEVKFEFTPRG 257

Query: 1147 GNAVAHQLAHLAMTNS 1194
            GN VA ++A  +++ S
Sbjct: 258  GNKVADRIARESISFS 273