BLASTX nr result

ID: Glycyrrhiza23_contig00006123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006123
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784...   175   4e-42
ref|XP_003522579.1| PREDICTED: uncharacterized protein LOC100784...   172   3e-41
ref|XP_003589591.1| Replication factor C large subunit [Medicago...   164   5e-39
ref|XP_003601043.1| ATPase family AAA domain-containing protein ...   140   1e-31
emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]    91   1e-16

>ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784968 [Glycine max]
          Length = 1197

 Score =  175 bits (443), Expect = 4e-42
 Identities = 95/143 (66%), Positives = 107/143 (74%)
 Frame = +2

Query: 5   HSSVLEGSVESLNLDNFLSTLKPSSAAISQNALYCSDKLSIQPDNMMEKSPANSAVLANE 184
           +SSVLEGSVESLN D   S+L PS  +ISQNAL  SD+L I P+N+ E SP++SA LA +
Sbjct: 206 NSSVLEGSVESLNFDKLRSSLDPSGVSISQNAL-SSDRLCIHPENLEEVSPSDSASLAEK 264

Query: 185 QPACPLKPEDAIVDLEEDEVSTVSGQVCIFRKSDTEPPSRFLQESMRSYYHSCEHKAEGS 364
              CP   EDA  DLE DE  T + Q  IFRKSDTEPPSRFLQESMRSYY SC  KAE S
Sbjct: 265 --TCPPTCEDAKQDLEVDESVTTTVQAGIFRKSDTEPPSRFLQESMRSYYRSCVDKAENS 322

Query: 365 LWIHKYKPTKAFEVCGNDESLNF 433
           LW +KYKPTKA EVCGNDES+NF
Sbjct: 323 LWTYKYKPTKAVEVCGNDESVNF 345


>ref|XP_003522579.1| PREDICTED: uncharacterized protein LOC100784209 [Glycine max]
          Length = 1199

 Score =  172 bits (436), Expect = 3e-41
 Identities = 93/143 (65%), Positives = 107/143 (74%)
 Frame = +2

Query: 5   HSSVLEGSVESLNLDNFLSTLKPSSAAISQNALYCSDKLSIQPDNMMEKSPANSAVLANE 184
           +SSVLE SVESLN D   S+L PS  +ISQN+L  SD+L I P+N+ E SP+NSA LA +
Sbjct: 207 NSSVLEASVESLNFDKLRSSLYPSGTSISQNSL-SSDRLCIHPENLEELSPSNSASLAKQ 265

Query: 185 QPACPLKPEDAIVDLEEDEVSTVSGQVCIFRKSDTEPPSRFLQESMRSYYHSCEHKAEGS 364
              CP   EDA +DLE DE +T + Q  IFRKSDTEPP RFLQESMRSYY SC  KAE S
Sbjct: 266 --TCPPTCEDAKLDLEVDESATTTVQAGIFRKSDTEPPIRFLQESMRSYYCSCVDKAENS 323

Query: 365 LWIHKYKPTKAFEVCGNDESLNF 433
           LW +KYKPTKA EVCGNDES+NF
Sbjct: 324 LWTYKYKPTKAVEVCGNDESVNF 346


>ref|XP_003589591.1| Replication factor C large subunit [Medicago truncatula]
           gi|355478639|gb|AES59842.1| Replication factor C large
           subunit [Medicago truncatula]
          Length = 1178

 Score =  164 bits (416), Expect = 5e-39
 Identities = 95/145 (65%), Positives = 102/145 (70%), Gaps = 1/145 (0%)
 Frame = +2

Query: 2   SHSSVLEGSVESLNLDNFLSTLKPSSAAISQNAL-YCSDKLSIQPDNMMEKSPANSAVLA 178
           S  SV+E SVE LN DNF S +K SS +ISQNAL Y  DKL  Q ++MME  P NSAV  
Sbjct: 166 SKFSVMEDSVEPLNFDNFHSGVKSSSTSISQNALSYSDDKLPTQSEHMMEMLPENSAV-D 224

Query: 179 NEQPACPLKPEDAIVDLEEDEVSTVSGQVCIFRKSDTEPPSRFLQESMRSYYHSCEHKAE 358
           NE    P KPEDAIVDLE DE ST+SGQ C   KSD EPPSR     M S+  SCE KAE
Sbjct: 225 NE----PAKPEDAIVDLEMDEASTISGQACNTGKSDAEPPSR-----MSSFCQSCEDKAE 275

Query: 359 GSLWIHKYKPTKAFEVCGNDESLNF 433
            SLWIHKYKPTKA EVCGNDESLNF
Sbjct: 276 SSLWIHKYKPTKASEVCGNDESLNF 300


>ref|XP_003601043.1| ATPase family AAA domain-containing protein [Medicago truncatula]
           gi|355490091|gb|AES71294.1| ATPase family AAA
           domain-containing protein [Medicago truncatula]
          Length = 1283

 Score =  140 bits (352), Expect = 1e-31
 Identities = 78/144 (54%), Positives = 91/144 (63%)
 Frame = +2

Query: 2   SHSSVLEGSVESLNLDNFLSTLKPSSAAISQNALYCSDKLSIQPDNMMEKSPANSAVLAN 181
           S+SSVLEGSVE LN +  LSTL P++A+   NA    D  S+ P+N+ E           
Sbjct: 214 SNSSVLEGSVECLNFEKILSTLNPAAASNFHNASTSLDSFSVLPENLQE---------TE 264

Query: 182 EQPACPLKPEDAIVDLEEDEVSTVSGQVCIFRKSDTEPPSRFLQESMRSYYHSCEHKAEG 361
           EQ      P+DA VD   DE    S Q   FRKS TEP SRFLQESMRS Y  CE KAEG
Sbjct: 265 EQTISASMPKDAKVDFGVDESLAFSLQAGYFRKSYTEPLSRFLQESMRSSYVGCEDKAEG 324

Query: 362 SLWIHKYKPTKAFEVCGNDESLNF 433
           SLW ++YKPTKA EVCGNDE++NF
Sbjct: 325 SLWTYRYKPTKAVEVCGNDEAMNF 348


>emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]
          Length = 1170

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 59/140 (42%), Positives = 77/140 (55%)
 Frame = +2

Query: 8   SSVLEGSVESLNLDNFLSTLKPSSAAISQNALYCSDKLSIQPDNMMEKSPANSAVLANEQ 187
           SSV EGS ESL+ DNFL+      A+  Q+     D+  IQ  N+ E S   S + ANEQ
Sbjct: 144 SSVFEGSAESLDFDNFLNVPHSIGASYFQSE-ESLDQRPIQL-NLHEISTPCSTMSANEQ 201

Query: 188 PACPLKPEDAIVDLEEDEVSTVSGQVCIFRKSDTEPPSRFLQESMRSYYHSCEHKAEGSL 367
                  ++   + E + +   +G     R  D  PPSR LQESM  YY  C ++ E SL
Sbjct: 202 VPYHQLSKNMEGNQEGNHIGFFTGDSGCGRNIDAMPPSRLLQESMMPYYLGCGNQPEDSL 261

Query: 368 WIHKYKPTKAFEVCGNDESL 427
           WI+KY+P KA EVCGN ES+
Sbjct: 262 WINKYQPEKAIEVCGNGESV 281


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