BLASTX nr result

ID: Glycyrrhiza23_contig00006122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006122
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK33981.1| unknown [Lotus japonicus]                              134   9e-30
ref|XP_003545702.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   115   5e-24
gb|ACU18813.1| unknown [Glycine max]                                  110   1e-22
ref|XP_003531535.1| PREDICTED: RING-H2 finger protein ATL54-like...   100   1e-19
ref|XP_003593242.1| RING-H2 zinc finger protein-like protein [Me...    89   3e-16

>gb|AFK33981.1| unknown [Lotus japonicus]
          Length = 404

 Score =  134 bits (337), Expect = 9e-30
 Identities = 83/150 (55%), Positives = 91/150 (60%), Gaps = 2/150 (1%)
 Frame = +1

Query: 13  SRVEEEGQFEVEDGTRVCETESQVAGSVSIRPRRSVSMDDSFVANINL-ALATVLSEESN 189
           +RV+EEGQ EVEDG R+CE E   AG VSI P+RSVS+D   VANINL A+ T LS ESN
Sbjct: 265 NRVDEEGQLEVEDGARICEAEGTDAGVVSIHPKRSVSLDSFSVANINLAAIGTFLSRESN 324

Query: 190 G-NSNRVLEGVSVNEPTVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQ 366
           G NS+RVLEGV   EP VSK                                      L+
Sbjct: 325 GANSHRVLEGVVEFEPGVSK---------------RVSGNENLAIISKGSSSFRSLRYLR 369

Query: 367 GVPSSMKRSRSYNGKYLLSWYSRSQKKPNA 456
           GVPSSMKRSRSYNGKYLLSWYSRSQKK NA
Sbjct: 370 GVPSSMKRSRSYNGKYLLSWYSRSQKKQNA 399


>ref|XP_003545702.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
           max]
          Length = 385

 Score =  115 bits (287), Expect = 5e-24
 Identities = 79/159 (49%), Positives = 87/159 (54%), Gaps = 7/159 (4%)
 Frame = +1

Query: 1   SASDSRV------EEEGQFEVEDGTRVCETESQVAGSVSIRPRRSVSMDDSFVANINLAL 162
           SA DS +      EEEGQ EVEDG RVCETE+ V    S  PR SVS+D    AN NLAL
Sbjct: 242 SAPDSELMNNRAEEEEGQLEVEDGVRVCETETPVEDVASTLPRSSVSLDSFSFANFNLAL 301

Query: 163 ATVLSEESNGNSNRVLEGVSVNEPTVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 342
           ATV   ESNGNS RVL GV  ++PT SK                                
Sbjct: 302 ATV---ESNGNSKRVLGGVD-DDPTASK----------------GVIGNDLATSSKGSSS 341

Query: 343 XXXXXXLQGVP-SSMKRSRSYNGKYLLSWYSRSQKKPNA 456
                 LQGVP SS+KRS+S+NGKYLLSWY  SQKKPNA
Sbjct: 342 FRLARYLQGVPSSSVKRSQSFNGKYLLSWYGCSQKKPNA 380


>gb|ACU18813.1| unknown [Glycine max]
          Length = 385

 Score =  110 bits (275), Expect = 1e-22
 Identities = 77/159 (48%), Positives = 85/159 (53%), Gaps = 7/159 (4%)
 Frame = +1

Query: 1   SASDSRV------EEEGQFEVEDGTRVCETESQVAGSVSIRPRRSVSMDDSFVANINLAL 162
           SA DS +      EEEGQ EVEDG RVCETE+ V    S  PR SV +D    AN NLAL
Sbjct: 242 SAPDSELMNNRAEEEEGQLEVEDGVRVCETETPVEDVASTLPRSSVFLDSFSFANFNLAL 301

Query: 163 ATVLSEESNGNSNRVLEGVSVNEPTVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 342
           ATV   E NGNS RVL GV  ++PT SK                                
Sbjct: 302 ATV---EFNGNSKRVLGGVD-DDPTASK----------------GVIGNDLATSSKGSSS 341

Query: 343 XXXXXXLQGVPS-SMKRSRSYNGKYLLSWYSRSQKKPNA 456
                 LQGVPS S+KRS+S+NGKYLLSWY  SQKKPNA
Sbjct: 342 FRLARYLQGVPSFSVKRSQSFNGKYLLSWYGCSQKKPNA 380


>ref|XP_003531535.1| PREDICTED: RING-H2 finger protein ATL54-like [Glycine max]
          Length = 403

 Score =  100 bits (250), Expect = 1e-19
 Identities = 72/156 (46%), Positives = 86/156 (55%), Gaps = 6/156 (3%)
 Frame = +1

Query: 7   SDSRVEEEGQFEV---EDGTRVCETESQVAG-SVSIRPRRSVSMDDSFVANINLALATVL 174
           +++RVEE GQ E    +DG RVCETE+ V   + SIRPRRS S+D   VAN NLALAT  
Sbjct: 261 NNNRVEEVGQLEEVVDDDGVRVCETETPVEDVAASIRPRRSFSLDSFSVANFNLALATA- 319

Query: 175 SEESNGNSNRVLEGV-SVNEPTVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 351
             ES GNS RV  GV  +++PT SK                                   
Sbjct: 320 --ESYGNSKRVQGGVDDIDDPTASKGVIGNYLATSSKGSSSFRLTRYLQ----------- 366

Query: 352 XXXLQGVP-SSMKRSRSYNGKYLLSWYSRSQKKPNA 456
               QG+P SS+KRS+S+NGKYLLS Y RSQKKPNA
Sbjct: 367 ----QGIPSSSVKRSQSFNGKYLLSRYGRSQKKPNA 398


>ref|XP_003593242.1| RING-H2 zinc finger protein-like protein [Medicago truncatula]
           gi|355482290|gb|AES63493.1| RING-H2 zinc finger
           protein-like protein [Medicago truncatula]
           gi|388498044|gb|AFK37088.1| unknown [Medicago
           truncatula]
          Length = 389

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 68/157 (43%), Positives = 78/157 (49%), Gaps = 3/157 (1%)
 Frame = +1

Query: 1   SASDSRVEEEGQFEVEDG--TRVCETESQVAGSVSI-RPRRSVSMDDSFVANINLALATV 171
           SA DS   E   +E  DG  + VCE E QV   VSI RPRRSVSMD       N A ATV
Sbjct: 256 SAFDS---ESRNWEENDGGQSEVCENERQVVDVVSIVRPRRSVSMD-------NFAFATV 305

Query: 172 LSEESNGNSNRVLEGVSVNEPTVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 351
           LS ESNGN +     +S N+  +SK                                   
Sbjct: 306 LSIESNGNGDS--SKMSFNDDAISKVNGNENLATTSKGSSSFSFRPTRY----------- 352

Query: 352 XXXLQGVPSSMKRSRSYNGKYLLSWYSRSQKKPNALF 462
              LQGVPS MKRS SYNGK+LLSW+S +QKKPN +F
Sbjct: 353 ---LQGVPSPMKRSSSYNGKFLLSWFSSNQKKPNDIF 386


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