BLASTX nr result

ID: Glycyrrhiza23_contig00006112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006112
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38245.1| unknown [Medicago truncatula]                           75   8e-12
ref|XP_002324968.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|NP_001078384.1| protein rotundifolia like 12 [Arabidopsis th...    70   2e-10
ref|XP_002863136.1| hypothetical protein ARALYDRAFT_332982 [Arab...    70   3e-10
gb|EAY96755.1| hypothetical protein OsI_18675 [Oryza sativa Indi...    64   1e-08

>gb|AFK38245.1| unknown [Medicago truncatula]
          Length = 45

 Score = 75.1 bits (183), Expect = 8e-12
 Identities = 31/44 (70%), Positives = 36/44 (81%)
 Frame = +3

Query: 84  SQPCRKTSLRKRCFVVAKQQKTRFYIFGRCIAMLLCWHDHSISD 215
           S PC+KTS  KRCF +AKQ K R +IFGRC+ MLLCWH+HSISD
Sbjct: 2   SLPCKKTSFTKRCFSMAKQHKARIHIFGRCLTMLLCWHNHSISD 45


>ref|XP_002324968.1| predicted protein [Populus trichocarpa] gi|222866402|gb|EEF03533.1|
           predicted protein [Populus trichocarpa]
          Length = 59

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 30/51 (58%), Positives = 39/51 (76%)
 Frame = +3

Query: 63  LPAYASKSQPCRKTSLRKRCFVVAKQQKTRFYIFGRCIAMLLCWHDHSISD 215
           LP+ +++ +   K   R+RC  +AKQQKTRFYI GRCI+MLLCWHDH+I D
Sbjct: 9   LPSRSNRRKGHGKNGFRRRCLSMAKQQKTRFYILGRCISMLLCWHDHAIRD 59


>ref|NP_001078384.1| protein rotundifolia like 12 [Arabidopsis thaliana]
           gi|42822053|tpg|DAA02281.1| TPA_exp: DVL10 [Arabidopsis
           thaliana] gi|332657874|gb|AEE83274.1| protein
           rotundifolia like 12 [Arabidopsis thaliana]
          Length = 55

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 35/62 (56%), Positives = 44/62 (70%)
 Frame = +3

Query: 30  LFLTN*PTMSSLPAYASKSQPCRKTSLRKRCFVVAKQQKTRFYIFGRCIAMLLCWHDHSI 209
           LF++N    SSLP     ++P RKT    RC ++AKQQ+TR YI  RC++MLLCWHDHSI
Sbjct: 3   LFMSN----SSLP-----TKPNRKTRFGDRCLLMAKQQRTRLYILRRCVSMLLCWHDHSI 53

Query: 210 SD 215
           SD
Sbjct: 54  SD 55


>ref|XP_002863136.1| hypothetical protein ARALYDRAFT_332982 [Arabidopsis lyrata subsp.
           lyrata] gi|297308970|gb|EFH39395.1| hypothetical protein
           ARALYDRAFT_332982 [Arabidopsis lyrata subsp. lyrata]
          Length = 51

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 29/44 (65%), Positives = 36/44 (81%)
 Frame = +3

Query: 84  SQPCRKTSLRKRCFVVAKQQKTRFYIFGRCIAMLLCWHDHSISD 215
           ++P RKTS   RC ++AKQQ+TR YI  RC++MLLCWHDHSISD
Sbjct: 8   TKPNRKTSFGDRCLLMAKQQRTRLYILRRCVSMLLCWHDHSISD 51


>gb|EAY96755.1| hypothetical protein OsI_18675 [Oryza sativa Indica Group]
          Length = 94

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
 Frame = +3

Query: 63  LPAYASKSQPCRKTS-LRKRCFVVAKQQKTRFYIFGRCIAMLLCWHDHSISD 215
           LP  +S S+   K + LR+RC+ V KQQ+TR YI  RC++MLLCWH+H +SD
Sbjct: 43  LPKSSSSSRRMTKPAELRRRCYAVLKQQRTRLYILRRCVSMLLCWHEHDLSD 94


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