BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006104
         (1613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621596.1| Pentatricopeptide repeat-containing protein ...   696   0.0  
ref|XP_003621600.1| Pentatricopeptide repeat-containing protein ...   677   0.0  
ref|XP_003551784.1| PREDICTED: pentatricopeptide repeat-containi...   627   e-177
ref|XP_003531893.1| PREDICTED: pentatricopeptide repeat-containi...   623   e-176
ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containi...   556   e-156

>ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355496611|gb|AES77814.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 849

 Score =  696 bits (1796), Expect = 0.0
 Identities = 345/510 (67%), Positives = 418/510 (81%)
 Frame = -1

Query: 1538 LGTLLGLMESRLSSEFSGRRSTRYTAAKMHSGRPRISPNNHRHSEAAVEALHCLINAGNN 1359
            LG+LL   +SRL+ EFSGRRSTR+ AAKMHSG PR++PN H HS AA EAL  L NAGNN
Sbjct: 65   LGSLLEGRQSRLAPEFSGRRSTRF-AAKMHSGMPRVTPNKHAHSAAADEALSYLFNAGNN 123

Query: 1358 PATIDTVLDTHVPKLWKCDDFVYLLKEFGNTGHFLQAHMCYEFAMCRENGDLAKGKLTSA 1179
             A ID VL  +  +LW+ +D++Y+LKEFGNTGHFL A  C++F + ++NG +AKGKL S 
Sbjct: 124  IAAIDNVLIAYESELWEVEDYIYMLKEFGNTGHFLLATKCFDFIIWKQNGRIAKGKLVST 183

Query: 1178 MIGTLGRLGKVENAWNLFQVARHAGFGNTVYSYSAMISAFGRNGCFTHAVNLFRSMPSWG 999
            MIGTLGRLG++ +A  LF+ AR  G GNTVYS+SAMISA+GRNG F+ AV+LFRSM SWG
Sbjct: 184  MIGTLGRLGEINHALRLFESARLEGHGNTVYSFSAMISAYGRNGHFSDAVDLFRSMRSWG 243

Query: 998  LEPNLIVYNALIDAGAKGEVDFDIVVKYFDELVAKGLVPDRVTYNSLLCTCVPKGLWELA 819
            + PNLI YN+LIDAGAKGEVDFD+VVK+FDE++A+G+VPDR+TYNSLL  C  KG+WE A
Sbjct: 244  VYPNLISYNSLIDAGAKGEVDFDVVVKFFDEMLAEGIVPDRLTYNSLLSVCASKGMWETA 303

Query: 818  QSLLREMDETGVGRDLYSYNTYLDTLCKAGQMDLAKEVLEEMPRKKVWPSVVTYSTMMDG 639
            Q LL EMD+ G+ RD ++YNTYLDTLCK GQ+DLA+ VLEEM  ++VWP+VVTYSTM+DG
Sbjct: 304  QKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDG 363

Query: 638  YAKANRLEDALNLYDEMNRRNVGFDRVSYNTLIGIYAKLGWFEEAIYKCKEMERRGIRMD 459
             AKAN LEDALNLY+EM  R++  DRVSYNT++GIYAKLG F+EAI +CKEME  G++ D
Sbjct: 364  CAKANLLEDALNLYEEMKLRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRD 423

Query: 458  VVTYNALLGGYGKQGKYDEVRRMFEEMKARNVYPNMLTYSTMIDVFTKSGRYREAMDVYR 279
            VVTYNALL GYG+ G YDEVRR+FEEMKA N+YPN LTYSTMIDV+TK G ++EAMDVY+
Sbjct: 424  VVTYNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYK 483

Query: 278  EFKQEGLEVDVVFYSALIDALCKNGLVESSMMLLDAMIAEGIKPNVVTYNSIIDAFGQLP 99
            +FK+  LEVDVVFY+++ID+LCKNGLVESS+MLL AMI +GIKPNVVT+NSIIDA  Q P
Sbjct: 484  DFKKAQLEVDVVFYTSIIDSLCKNGLVESSIMLLIAMIEKGIKPNVVTFNSIIDASRQSP 543

Query: 98   ALECAVDTSLQANEYPTEHSSSMVIAGTNQ 9
             LE  V  S QA EYPTE  SSM+I G  Q
Sbjct: 544  TLEYGVHGSSQAVEYPTEQLSSMLIDGAFQ 573


>ref|XP_003621600.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355496615|gb|AES77818.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 890

 Score =  677 bits (1746), Expect = 0.0
 Identities = 337/508 (66%), Positives = 404/508 (79%)
 Frame = -1

Query: 1532 TLLGLMESRLSSEFSGRRSTRYTAAKMHSGRPRISPNNHRHSEAAVEALHCLINAGNNPA 1353
            TLL   +SRL+ EFSGR+STR+ AAKMHSG PR++PN H HS AA EAL CL  AGNN A
Sbjct: 102  TLLEGRQSRLAPEFSGRKSTRF-AAKMHSGMPRVTPNKHAHSAAADEALSCLFKAGNNIA 160

Query: 1352 TIDTVLDTHVPKLWKCDDFVYLLKEFGNTGHFLQAHMCYEFAMCRENGDLAKGKLTSAMI 1173
             ID V  ++  KLW+ +D++Y+LKEFGNT   L A  C++F M ++NG + KGKL SAMI
Sbjct: 161  AIDNVFISYEHKLWEVEDYIYMLKEFGNTRSLLHAKKCFDFIMSKQNGRVDKGKLVSAMI 220

Query: 1172 GTLGRLGKVENAWNLFQVARHAGFGNTVYSYSAMISAFGRNGCFTHAVNLFRSMPSWGLE 993
            GTLGRLG++  A  LF+ AR  G+G+TV+S+SAMISAFGRNG F  AV+LFRSM SWG+ 
Sbjct: 221  GTLGRLGEINLALGLFERARLEGYGSTVHSFSAMISAFGRNGRFPDAVDLFRSMSSWGVV 280

Query: 992  PNLIVYNALIDAGAKGEVDFDIVVKYFDELVAKGLVPDRVTYNSLLCTCVPKGLWELAQS 813
            PN+I YN++IDAGAKGEV FD+VVK++DE++A GL+PDR+TYNSLL  C  KG+WE+AQ 
Sbjct: 281  PNVITYNSIIDAGAKGEVSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQK 340

Query: 812  LLREMDETGVGRDLYSYNTYLDTLCKAGQMDLAKEVLEEMPRKKVWPSVVTYSTMMDGYA 633
            LL EMD   +  D+++YNTYLDTLCKAGQ+DLA+ V EEM  K+VWP+VVTYS MMDGYA
Sbjct: 341  LLSEMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYA 400

Query: 632  KANRLEDALNLYDEMNRRNVGFDRVSYNTLIGIYAKLGWFEEAIYKCKEMERRGIRMDVV 453
            KAN LEDALNLY+EM  R+V  DRVSYNTL+GIY KLG  +EAI KCKEMER GI  DVV
Sbjct: 401  KANLLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVV 460

Query: 452  TYNALLGGYGKQGKYDEVRRMFEEMKARNVYPNMLTYSTMIDVFTKSGRYREAMDVYREF 273
            TYNALL GYGK G YDEVRR+FEEMKARN+YPN LTYSTMID++TK   ++EAMDVYREF
Sbjct: 461  TYNALLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREF 520

Query: 272  KQEGLEVDVVFYSALIDALCKNGLVESSMMLLDAMIAEGIKPNVVTYNSIIDAFGQLPAL 93
            K   LE+DVVFYSA+ID LCKNGL+ESS+MLL AM+ +GIKPNVVT+NSIIDA  Q P L
Sbjct: 521  KMARLEIDVVFYSAIIDTLCKNGLMESSIMLLMAMMEKGIKPNVVTFNSIIDASQQSPTL 580

Query: 92   ECAVDTSLQANEYPTEHSSSMVIAGTNQ 9
            E  V+ S  A +YP E SS +VI G  Q
Sbjct: 581  EYGVNGSSDAIDYPIEQSSPIVIDGAFQ 608


>ref|XP_003551784.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
            chloroplastic-like [Glycine max]
          Length = 875

 Score =  627 bits (1616), Expect = e-177
 Identities = 320/514 (62%), Positives = 392/514 (76%), Gaps = 4/514 (0%)
 Frame = -1

Query: 1538 LGTLLGLMESRLSSEFSGRRSTRYTAAKMHSGRPRISPNNHRHSEAAVEALHCLINAGNN 1359
            L   LG  ++RL+ EFSGR S R    KM+SG PR  PNN +HS+AA E LH L NAGN+
Sbjct: 78   LSPWLGAQKTRLAPEFSGRPSNR-NPGKMNSGGPRAVPNNQQHSKAAEEVLHSLTNAGND 136

Query: 1358 PATIDTVLDTHVPKLWKCDDFVYLLKEFGNTGHFLQAHMCYEFAMCRENGDLAKGKLTSA 1179
             A ID VL  +  +L+  +D+VYLLKEF NTG  L A   Y FAM R   +   GKLTS 
Sbjct: 137  VAAIDNVLLNY--RLYVAEDYVYLLKEFANTGDLLLATRTYNFAMSRATDNTFMGKLTSN 194

Query: 1178 MIGTLGRLGKVENAWNLFQVARHAGFGNTVYSYSAMISAFGRNGCFTHAVNLFRSMPSWG 999
            MI TLGRL K+E A NLF+ +R+ G+GNTVYS+SAMISA GRN CF+ AV+L RSM ++G
Sbjct: 195  MIRTLGRLKKIELALNLFEESRNRGYGNTVYSFSAMISALGRNDCFSEAVSLLRSMGNFG 254

Query: 998  LEPNLIVYNALIDAGAKGEVDFDIVVKYFDELVAKGLVPDRVTYNSLLCTCVPKGLWELA 819
            LEPNL+ YNA+IDAGAKGE+ F+IVVK+ +E++A G +PDR+TYNSLL TCV KG W+L 
Sbjct: 255  LEPNLVTYNAIIDAGAKGELPFEIVVKFLEEMIAAGCLPDRLTYNSLLKTCVAKGRWQLC 314

Query: 818  QSLLREMDETGVGRDLYSYNTYLDTLCKAGQMDLAKEVLE-EMPRKKVWPSVVTYSTMMD 642
            + LL EM+  G+GRD+Y+YNTY+D LCK G+MDLA+  ++ EMP K + P+VVTYST+M 
Sbjct: 315  RDLLAEMEWKGIGRDVYTYNTYVDALCKGGRMDLARHAIDVEMPAKNILPNVVTYSTLMA 374

Query: 641  GYAKANRLEDALNLYDEMNRRNVGFDRVSYNTLIGIYAKLGWFEEAIYKCKEMERRGIRM 462
            GY+KA R EDALN+YDEM    +  DRVSYNTL+G+YA LGWFEEA+ K KEME  GI+ 
Sbjct: 375  GYSKAERFEDALNIYDEMKHLLIRLDRVSYNTLVGLYANLGWFEEAVGKFKEMECCGIKN 434

Query: 461  DVVTYNALLGGYGKQGKYDEVRRMFEEMKARNVYPNMLTYSTMIDVFTKSGRYREAMDVY 282
            DVVTYNAL+ GYG+  KY EVR++F+EMKAR +YPN LTYST+I ++TK   Y EAMDVY
Sbjct: 435  DVVTYNALIEGYGRHNKYVEVRKLFDEMKARRIYPNDLTYSTLIKIYTKGRMYAEAMDVY 494

Query: 281  REFKQEGLEVDVVFYSALIDALCKNGLVESSMMLLDAMIAEGIKPNVVTYNSIIDAF--- 111
            RE KQEG++ DVVFYSALIDALCKNGL+ESS+ LLD M  +G +PNVVTYNSIIDAF   
Sbjct: 495  RELKQEGMKTDVVFYSALIDALCKNGLIESSLRLLDVMTEKGSRPNVVTYNSIIDAFRIG 554

Query: 110  GQLPALECAVDTSLQANEYPTEHSSSMVIAGTNQ 9
             QLPALECAVDTS QANE+  + SSS + AG  Q
Sbjct: 555  QQLPALECAVDTSFQANEHQIKPSSSRLSAGNFQ 588


>ref|XP_003531893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
            chloroplastic-like [Glycine max]
          Length = 878

 Score =  623 bits (1606), Expect = e-176
 Identities = 317/514 (61%), Positives = 392/514 (76%), Gaps = 4/514 (0%)
 Frame = -1

Query: 1538 LGTLLGLMESRLSSEFSGRRSTRYTAAKMHSGRPRISPNNHRHSEAAVEALHCLINAGNN 1359
            L   LG  ++RL+ EFSGRRS R    KM+SG PR  PNN +HS+AA E LH L NAGN+
Sbjct: 79   LSPWLGAQKTRLAPEFSGRRSNR-NPGKMNSGGPRAVPNNQQHSKAAEEVLHSLTNAGND 137

Query: 1358 PATIDTVLDTHVPKLWKCDDFVYLLKEFGNTGHFLQAHMCYEFAMCRENGDLAKGKLTSA 1179
             + ID+VL  +  +L+  +D+VYLLKEF NTG  L A   Y+FAM R   +   GKLTS 
Sbjct: 138  VSAIDSVLLHY--RLYVAEDYVYLLKEFANTGDLLLATRTYDFAMSRATDNTFMGKLTSN 195

Query: 1178 MIGTLGRLGKVENAWNLFQVARHAGFGNTVYSYSAMISAFGRNGCFTHAVNLFRSMPSWG 999
            MI TLGRL K+E A +LF+ +R  G+GNTVYS+SAMISA GRN  F+ AV+L RSM  +G
Sbjct: 196  MIRTLGRLKKIELALDLFEESRTRGYGNTVYSFSAMISALGRNNRFSEAVSLLRSMGKFG 255

Query: 998  LEPNLIVYNALIDAGAKGEVDFDIVVKYFDELVAKGLVPDRVTYNSLLCTCVPKGLWELA 819
            LEPNL+ YNA+IDAGAKGE+ F+IVVK+ +E++A G +PDR+TYNSLL TCV KG W+L 
Sbjct: 256  LEPNLVTYNAIIDAGAKGELTFEIVVKFLEEMIAAGCMPDRLTYNSLLKTCVAKGRWKLC 315

Query: 818  QSLLREMDETGVGRDLYSYNTYLDTLCKAGQMDLAKEVLE-EMPRKKVWPSVVTYSTMMD 642
            + LL EM+  G+GRD+Y+YNTY+D LCK G+MDLA+  ++ EMP K +WP+VVTYST+M 
Sbjct: 316  RDLLAEMEWKGIGRDVYTYNTYVDALCKGGRMDLARHAIDVEMPAKNIWPNVVTYSTLMA 375

Query: 641  GYAKANRLEDALNLYDEMNRRNVGFDRVSYNTLIGIYAKLGWFEEAIYKCKEMERRGIRM 462
            GY+KA R EDALN+YDEM    +  DRVSYNTL+G+YA LGWFEEA+ K KEME  GI+ 
Sbjct: 376  GYSKAERFEDALNIYDEMKHLLIRLDRVSYNTLVGLYANLGWFEEAVGKFKEMECCGIKN 435

Query: 461  DVVTYNALLGGYGKQGKYDEVRRMFEEMKARNVYPNMLTYSTMIDVFTKSGRYREAMDVY 282
            DVVTYNAL+ GYG+  KY EV+++F+EMKAR +YPN LTYST+I ++TK   Y EAMDVY
Sbjct: 436  DVVTYNALIEGYGRHNKYVEVQKLFDEMKARRIYPNDLTYSTLIKIYTKGRMYAEAMDVY 495

Query: 281  REFKQEGLEVDVVFYSALIDALCKNGLVESSMMLLDAMIAEGIKPNVVTYNSIIDAF--- 111
            RE KQEG++ DVVFYSALIDALCKNGL+ESS+ LLD M  +G +PNVVTYNSIIDAF   
Sbjct: 496  RELKQEGMKTDVVFYSALIDALCKNGLIESSLRLLDVMTEKGSRPNVVTYNSIIDAFKIG 555

Query: 110  GQLPALECAVDTSLQANEYPTEHSSSMVIAGTNQ 9
             QLPALECAVDT  QANE+  + SSS +I G  Q
Sbjct: 556  QQLPALECAVDTPFQANEHQIKPSSSRLIVGNFQ 589


>ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
            chloroplastic [Vitis vinifera]
          Length = 867

 Score =  556 bits (1432), Expect = e-156
 Identities = 278/497 (55%), Positives = 368/497 (74%)
 Frame = -1

Query: 1514 ESRLSSEFSGRRSTRYTAAKMHSGRPRISPNNHRHSEAAVEALHCLINAGNNPATIDTVL 1335
            +S L+++FSGRRSTR+ + KMH GRP+ +    RH+  A EAL   I   ++   ID+VL
Sbjct: 81   KSELTADFSGRRSTRFVS-KMHFGRPKTAAAA-RHTSTAEEALRHAIRFASDDKGIDSVL 138

Query: 1334 DTHVPKLWKCDDFVYLLKEFGNTGHFLQAHMCYEFAMCRENGDLAKGKLTSAMIGTLGRL 1155
                 +L   DD+ +LL+E GN G + +A  C+EFA+ RE     +GKL SAMI  LGRL
Sbjct: 139  LNFESRLCGSDDYTFLLRELGNRGEWAKAIRCFEFAVRREQRRNEQGKLASAMISILGRL 198

Query: 1154 GKVENAWNLFQVARHAGFGNTVYSYSAMISAFGRNGCFTHAVNLFRSMPSWGLEPNLIVY 975
            G+VE A N+F+ A + G+GNTVY++SA+ISA+GR+G    A+ +F +M S GL+PNL+ Y
Sbjct: 199  GQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTY 258

Query: 974  NALIDAGAKGEVDFDIVVKYFDELVAKGLVPDRVTYNSLLCTCVPKGLWELAQSLLREMD 795
            NA+IDA  KG VDF+   + FDE++  G+ PDR+T+NSLL  C   GLWE A++L  EM 
Sbjct: 259  NAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEML 318

Query: 794  ETGVGRDLYSYNTYLDTLCKAGQMDLAKEVLEEMPRKKVWPSVVTYSTMMDGYAKANRLE 615
              G+ +D+++YNT LD +CK GQMDLA +++ EMPRK + P+VVTYST++DGYAKA RL+
Sbjct: 319  YRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLD 378

Query: 614  DALNLYDEMNRRNVGFDRVSYNTLIGIYAKLGWFEEAIYKCKEMERRGIRMDVVTYNALL 435
            +ALNL++EM   ++G DRVSYNTL+ IYAKLG FEEA+  CKEME  GI+ D VTYNALL
Sbjct: 379  EALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALL 438

Query: 434  GGYGKQGKYDEVRRMFEEMKARNVYPNMLTYSTMIDVFTKSGRYREAMDVYREFKQEGLE 255
            GGYGKQGKY+EV+R+FEEMKA  ++PN+LTYST+IDV++K G Y+EAM+V+REFK+ GL+
Sbjct: 439  GGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLK 498

Query: 254  VDVVFYSALIDALCKNGLVESSMMLLDAMIAEGIKPNVVTYNSIIDAFGQLPALECAVDT 75
             DVV YSALIDALCKNGLVES++  LD M  EGI+PNVVTYNSIIDAFG+  + EC +D 
Sbjct: 499  ADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECVIDP 558

Query: 74   SLQANEYPTEHSSSMVI 24
              + N      SS  V+
Sbjct: 559  PYETNVSKMSSSSLKVV 575