BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006102
         (1868 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609866.1| Pentatricopeptide repeat-containing protein ...   798   0.0  
ref|XP_003550709.1| PREDICTED: pentatricopeptide repeat-containi...   777   0.0  
ref|XP_003550954.1| PREDICTED: pentatricopeptide repeat-containi...   776   0.0  
ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containi...   714   0.0  
emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]   712   0.0  

>ref|XP_003609866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355510921|gb|AES92063.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 496

 Score =  798 bits (2060), Expect = 0.0
 Identities = 405/501 (80%), Positives = 434/501 (86%), Gaps = 2/501 (0%)
 Frame = +3

Query: 51   MDMASISLTFSNS-IVPSPIPQDKCKKTHNPRSQD-PIFRVTRYAVSAPASKTASSDSSP 224
            MDMAS+SLTFS+S IVPSPIPQ      +NPR    PIF    YAVS+  SKTAS+ +S 
Sbjct: 1    MDMASVSLTFSSSSIVPSPIPQHNKTTHNNPRKPHLPIF----YAVSSSPSKTASASNSS 56

Query: 225  VVKKRHWKQGEFPGVSETSLPGSTRRRSPIXXXXXXXXXXXXXXXWANTVTEALSERIDK 404
            VVKK+HWKQGEFPGVSETSLP STRR+ PI               WANTVTEALSE IDK
Sbjct: 57   VVKKKHWKQGEFPGVSETSLPSSTRRK-PIKNVKKKLDRKNNAKAWANTVTEALSECIDK 115

Query: 405  KQWLQALEIFDMLREQSFYQPKEGTYMKLIVLLGKSGQPHRASQLFTTMIEEGCDPTPEL 584
            KQWLQALE  DMLREQSFYQP+EGTYMKLIVLLGKSGQP RA QLFT MIEEGCDPTPEL
Sbjct: 116  KQWLQALETLDMLREQSFYQPREGTYMKLIVLLGKSGQPQRAHQLFTAMIEEGCDPTPEL 175

Query: 585  YTALIAAYCRSNLIDEAFLILDEMKNHPLCQPDVFTYSTLIKACVDAFKFELVESLYEEM 764
            YTAL+AAYCRSN+IDEA  ILDEMKNHPLCQPDVFTYSTLIKACVD FKFEL+E LYEEM
Sbjct: 176  YTALLAAYCRSNMIDEALSILDEMKNHPLCQPDVFTYSTLIKACVDIFKFELIELLYEEM 235

Query: 765  AQRSIAPNTVTQNIVLSGYGKAGKFEQMEKVLSSMLQSTNCKPDVWTMNTIISVFGNMGQ 944
            AQRSI PNTVTQNIVL+GYGKAG F+QMEKVLS MLQS +CKPDVWTMNTII VFGNMGQ
Sbjct: 236  AQRSIMPNTVTQNIVLNGYGKAGMFDQMEKVLSGMLQSADCKPDVWTMNTIIGVFGNMGQ 295

Query: 945  IDMMEKWYEKFRNFRIEPETRTFNILIGAYGKRRMYDKMSSVMEYMRKLQFPWTTSTYNN 1124
            IDMMEKWYEKFRNF IEPETRTFNILIG+YGK+RMYDKMSSVMEYMRKLQFPWTTSTYNN
Sbjct: 296  IDMMEKWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNN 355

Query: 1125 VIEAFADAGDAKHMEYTFDQMRAEGMKADAKTFYCLVNGFANAGLFHKVISSVRLATRLE 1304
            VIEAFA+AGDAK+MEYTF+QMR+EGM+AD KTF CL+ GFANAGLFHKVISSV+LA +LE
Sbjct: 356  VIEAFAEAGDAKNMEYTFNQMRSEGMRADTKTFCCLIKGFANAGLFHKVISSVQLAAKLE 415

Query: 1305 IPENTVFYNAVLSACAKAEDLMEMERVFKRMKDNQCQPDDTTYWIMVEAYRKEGMNDKIY 1484
            IP NT FYNAVLSACAKAEDLMEM+RVF RMKD QC  DDTTY IMVEAYRKEGMNDKIY
Sbjct: 416  IPLNTAFYNAVLSACAKAEDLMEMDRVFMRMKDTQCPLDDTTYSIMVEAYRKEGMNDKIY 475

Query: 1485 YLEQEKQKIITDHKEVSQPED 1547
            YLEQEKQ +ITD+K  +QP D
Sbjct: 476  YLEQEKQTMITDNKIENQPVD 496


>ref|XP_003550709.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
            chloroplastic-like [Glycine max]
          Length = 488

 Score =  777 bits (2006), Expect = 0.0
 Identities = 387/498 (77%), Positives = 422/498 (84%)
 Frame = +3

Query: 57   MASISLTFSNSIVPSPIPQDKCKKTHNPRSQDPIFRVTRYAVSAPASKTASSDSSPVVKK 236
            MASISL+F +SIVPS IP DK  KTH+    +P F + R+ +SAPA           VKK
Sbjct: 1    MASISLSFCSSIVPSRIPHDKSNKTHS--HHNPTFPLIRFGISAPA-----------VKK 47

Query: 237  RHWKQGEFPGVSETSLPGSTRRRSPIXXXXXXXXXXXXXXXWANTVTEALSERIDKKQWL 416
            RHWK+GEFP  S+ S P  TRR++P+               W NTVTE+LSERI  K WL
Sbjct: 48   RHWKKGEFPATSQPSFPNDTRRKTPLKNLKKKFDKKNDAKAWVNTVTESLSERIHNKHWL 107

Query: 417  QALEIFDMLREQSFYQPKEGTYMKLIVLLGKSGQPHRASQLFTTMIEEGCDPTPELYTAL 596
            QAL++FDMLREQ+FYQPKEGT MKLIVLLGKSGQPHRA QLFTTMIEEG +PTPELYTAL
Sbjct: 108  QALQVFDMLREQTFYQPKEGTCMKLIVLLGKSGQPHRAHQLFTTMIEEGLEPTPELYTAL 167

Query: 597  IAAYCRSNLIDEAFLILDEMKNHPLCQPDVFTYSTLIKACVDAFKFELVESLYEEMAQRS 776
            +AAYCRSN+IDEAF +L+EMK  PLCQPDVFTYSTLIK CVDAFKF+LV+ LYEEMA+RS
Sbjct: 168  LAAYCRSNMIDEAFSVLNEMKKLPLCQPDVFTYSTLIKVCVDAFKFDLVQLLYEEMAERS 227

Query: 777  IAPNTVTQNIVLSGYGKAGKFEQMEKVLSSMLQSTNCKPDVWTMNTIISVFGNMGQIDMM 956
            I PNTVTQNIVL GYGKAG F+QMEKVLSSMLQST CKPDVWTMNTIISVFGNMGQIDM 
Sbjct: 228  ITPNTVTQNIVLGGYGKAGMFDQMEKVLSSMLQSTTCKPDVWTMNTIISVFGNMGQIDMT 287

Query: 957  EKWYEKFRNFRIEPETRTFNILIGAYGKRRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEA 1136
            EKWYEKFR F IEPETRTFNILIGAYGK+RMYDKMSSVMEYMRKLQFPWTTSTYNNVIEA
Sbjct: 288  EKWYEKFRYFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEA 347

Query: 1137 FADAGDAKHMEYTFDQMRAEGMKADAKTFYCLVNGFANAGLFHKVISSVRLATRLEIPEN 1316
            FADAGDAKHME TFDQMRAEGMKAD KT  CL+NG+ANAGLFHKVISSVRLA +LEIPEN
Sbjct: 348  FADAGDAKHMECTFDQMRAEGMKADTKTLCCLINGYANAGLFHKVISSVRLAGKLEIPEN 407

Query: 1317 TVFYNAVLSACAKAEDLMEMERVFKRMKDNQCQPDDTTYWIMVEAYRKEGMNDKIYYLEQ 1496
              FYNAVLSACAKAEDLMEMERVFKRMKD+QCQPDDTTY IM+EAYRKEGMNDKIYYLEQ
Sbjct: 408  ITFYNAVLSACAKAEDLMEMERVFKRMKDSQCQPDDTTYTIMIEAYRKEGMNDKIYYLEQ 467

Query: 1497 EKQKIITDHKEVSQPEDE 1550
            EKQ ++TD K+ SQ E+E
Sbjct: 468  EKQTMMTDDKKASQFENE 485


>ref|XP_003550954.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
            chloroplastic-like [Glycine max]
          Length = 488

 Score =  776 bits (2005), Expect = 0.0
 Identities = 387/498 (77%), Positives = 421/498 (84%)
 Frame = +3

Query: 57   MASISLTFSNSIVPSPIPQDKCKKTHNPRSQDPIFRVTRYAVSAPASKTASSDSSPVVKK 236
            MAS+SL+F + IVPS IP DK  KTH+     P F + R+ +SAPA           VKK
Sbjct: 1    MASMSLSFCSCIVPSRIPHDKSNKTHS--HHQPTFPLIRFGISAPA-----------VKK 47

Query: 237  RHWKQGEFPGVSETSLPGSTRRRSPIXXXXXXXXXXXXXXXWANTVTEALSERIDKKQWL 416
            RHWK+GEFP  S+ S P  TRR++P+               W NTVTE+LSERI  K WL
Sbjct: 48   RHWKKGEFPATSQPSFPNDTRRKTPLKNLKKKFDKKNDAKAWVNTVTESLSERIHNKHWL 107

Query: 417  QALEIFDMLREQSFYQPKEGTYMKLIVLLGKSGQPHRASQLFTTMIEEGCDPTPELYTAL 596
            QAL++FDMLREQ+FYQPKEGTYMKLIVLLGKSGQPHRA QLFTTMIEEG +PTPELYTAL
Sbjct: 108  QALQVFDMLREQTFYQPKEGTYMKLIVLLGKSGQPHRAHQLFTTMIEEGLEPTPELYTAL 167

Query: 597  IAAYCRSNLIDEAFLILDEMKNHPLCQPDVFTYSTLIKACVDAFKFELVESLYEEMAQRS 776
            +AAYCRSN+IDEAF +L+EMK  P CQPDVFTYSTLIK CVDAFKF+LVE LYEEMA+RS
Sbjct: 168  LAAYCRSNMIDEAFSVLNEMKKLPRCQPDVFTYSTLIKVCVDAFKFDLVELLYEEMAERS 227

Query: 777  IAPNTVTQNIVLSGYGKAGKFEQMEKVLSSMLQSTNCKPDVWTMNTIISVFGNMGQIDMM 956
            I PNTVTQNIVL GYGKAG F+QMEKVLSSML ST CKPDVWTMNTIISVFGNMGQIDMM
Sbjct: 228  IMPNTVTQNIVLGGYGKAGMFDQMEKVLSSMLLSTTCKPDVWTMNTIISVFGNMGQIDMM 287

Query: 957  EKWYEKFRNFRIEPETRTFNILIGAYGKRRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEA 1136
            EKWYEKFR F IEPETRTFNILIGAYGK+RMYDKMSSVMEYMRKLQFPWTTSTYNNVIEA
Sbjct: 288  EKWYEKFRYFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEA 347

Query: 1137 FADAGDAKHMEYTFDQMRAEGMKADAKTFYCLVNGFANAGLFHKVISSVRLATRLEIPEN 1316
            FADAGDAKHME TFDQMRAEGMKAD KT  CL+NG+ANAGLFHKVISSVRLA +LEIPEN
Sbjct: 348  FADAGDAKHMECTFDQMRAEGMKADTKTLCCLINGYANAGLFHKVISSVRLAGKLEIPEN 407

Query: 1317 TVFYNAVLSACAKAEDLMEMERVFKRMKDNQCQPDDTTYWIMVEAYRKEGMNDKIYYLEQ 1496
              FYNAVLSACAKAEDLMEMERVFKRMKD+QCQPDDTTY IM+EAYRKEGMNDKIYYLEQ
Sbjct: 408  ITFYNAVLSACAKAEDLMEMERVFKRMKDSQCQPDDTTYTIMIEAYRKEGMNDKIYYLEQ 467

Query: 1497 EKQKIITDHKEVSQPEDE 1550
            EKQ ++TD K+VSQ E+E
Sbjct: 468  EKQTMMTDDKKVSQFENE 485


>ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
            chloroplastic [Vitis vinifera]
          Length = 498

 Score =  714 bits (1844), Expect = 0.0
 Identities = 361/497 (72%), Positives = 414/497 (83%), Gaps = 9/497 (1%)
 Frame = +3

Query: 57   MASISLTFSNSIVPSPIPQDKCKKTHNPRSQD---PIFRVTRYAVSAPASK------TAS 209
            MASISL+FS+S++PSP+ QDK K T   + +D    +  V R A ++PA +      ++S
Sbjct: 1    MASISLSFSSSLLPSPLLQDKNKATSATKPRDHHGSLCGVVRCAFASPARRKTSSTPSSS 60

Query: 210  SDSSPVVKKRHWKQGEFPGVSETSLPGSTRRRSPIXXXXXXXXXXXXXXXWANTVTEALS 389
            S SS V KKR WKQGEFPG   TS  G +R+ +PI               WANTV EALS
Sbjct: 61   SSSSAVGKKRLWKQGEFPG---TSAEGRSRK-TPIKNIKKKLDRKNDAKAWANTVAEALS 116

Query: 390  ERIDKKQWLQALEIFDMLREQSFYQPKEGTYMKLIVLLGKSGQPHRASQLFTTMIEEGCD 569
            + + KKQWLQALE+F+MLREQ FYQPKEGTYMKL+VLLGKSGQP RA +LF TM+EEGC+
Sbjct: 117  DLVLKKQWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDTMVEEGCE 176

Query: 570  PTPELYTALIAAYCRSNLIDEAFLILDEMKNHPLCQPDVFTYSTLIKACVDAFKFELVES 749
            PT ELYTAL+A+YCRSNLIDEAF IL++MK  P CQPDVFTYSTL+KACVDA +FELVES
Sbjct: 177  PTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFELVES 236

Query: 750  LYEEMAQRSIAPNTVTQNIVLSGYGKAGKFEQMEKVLSSMLQSTNCKPDVWTMNTIISVF 929
            LYEEM  RSI PNTVTQNIVLSGYGKAGKF++MEKVLS ML+ST+ KPDVWTMNTI+S+F
Sbjct: 237  LYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLF 296

Query: 930  GNMGQIDMMEKWYEKFRNFRIEPETRTFNILIGAYGKRRMYDKMSSVMEYMRKLQFPWTT 1109
            GN GQI++MEKWYEKFRNF IEPETRTFNILIGAYGK+RMYDKMSSVMEYMRKLQFPWTT
Sbjct: 297  GNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTT 356

Query: 1110 STYNNVIEAFADAGDAKHMEYTFDQMRAEGMKADAKTFYCLVNGFANAGLFHKVISSVRL 1289
            STYNNVIEAF+D GDAK+MEYTFDQMRAEGMKAD KTF CL+ G+ANAGLFHKV+SSV+L
Sbjct: 357  STYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKVVSSVQL 416

Query: 1290 ATRLEIPENTVFYNAVLSACAKAEDLMEMERVFKRMKDNQCQPDDTTYWIMVEAYRKEGM 1469
            A + EIPENT FYNAV+SACAKAEDL+EMERVF RMKD  CQPD TTY IMVEAY+KEGM
Sbjct: 417  AGKFEIPENTSFYNAVISACAKAEDLIEMERVFNRMKDKHCQPDSTTYSIMVEAYKKEGM 476

Query: 1470 NDKIYYLEQEKQKIITD 1520
            NDKIY LEQE+Q+++ D
Sbjct: 477  NDKIYDLEQERQRMVAD 493


>emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]
          Length = 525

 Score =  712 bits (1837), Expect = 0.0
 Identities = 360/498 (72%), Positives = 414/498 (83%), Gaps = 9/498 (1%)
 Frame = +3

Query: 57   MASISLTFSNSIVPSPIPQDKCKKTHNPRSQD---PIFRVTRYAVSAPASK------TAS 209
            MASISL+FS+S++PSP+ QDK K T   + +D    +  V R A ++PA +      ++S
Sbjct: 1    MASISLSFSSSLLPSPLLQDKNKATSATKPRDHHGSLCGVVRCAFASPARRKTSSTPSSS 60

Query: 210  SDSSPVVKKRHWKQGEFPGVSETSLPGSTRRRSPIXXXXXXXXXXXXXXXWANTVTEALS 389
            S SS V KKR WKQGEFPG   TS  G +R+ +PI               WANTV EALS
Sbjct: 61   SSSSAVGKKRLWKQGEFPG---TSAEGRSRK-TPIKNIKKKLDRKNDAKAWANTVAEALS 116

Query: 390  ERIDKKQWLQALEIFDMLREQSFYQPKEGTYMKLIVLLGKSGQPHRASQLFTTMIEEGCD 569
            + + KKQWLQALE+F+MLREQ FYQPKEGTYMKL+VLLGKSGQP RA +LF TM+EEGC+
Sbjct: 117  DLVLKKQWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDTMVEEGCE 176

Query: 570  PTPELYTALIAAYCRSNLIDEAFLILDEMKNHPLCQPDVFTYSTLIKACVDAFKFELVES 749
            PT ELYTAL+A+YCRSNLIDEAF IL++MK  P CQPDVFTYSTL+KACVDA +FELVES
Sbjct: 177  PTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFELVES 236

Query: 750  LYEEMAQRSIAPNTVTQNIVLSGYGKAGKFEQMEKVLSSMLQSTNCKPDVWTMNTIISVF 929
            LYEEM  RSI PNTVTQNIVLSGYGKAGKF++MEKVLS ML+ST+ KPDVWTMNTI+S+F
Sbjct: 237  LYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLF 296

Query: 930  GNMGQIDMMEKWYEKFRNFRIEPETRTFNILIGAYGKRRMYDKMSSVMEYMRKLQFPWTT 1109
            GN GQI++MEKWYEKFRNF IEPETRTFNILIGAYGK+RMYDKMSSVMEYMRKLQFPWTT
Sbjct: 297  GNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTT 356

Query: 1110 STYNNVIEAFADAGDAKHMEYTFDQMRAEGMKADAKTFYCLVNGFANAGLFHKVISSVRL 1289
            STYNNVIEAF+D GDAK+MEYTFDQMRAEGMKAD KTF CL+ G+ANAGLFHKV+SSV+L
Sbjct: 357  STYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKVVSSVQL 416

Query: 1290 ATRLEIPENTVFYNAVLSACAKAEDLMEMERVFKRMKDNQCQPDDTTYWIMVEAYRKEGM 1469
            A + EIPENT FYNAV+SACAKAEDL+EMERVF RMKD  CQPD TTY IMVEAY+KEGM
Sbjct: 417  AGKFEIPENTSFYNAVISACAKAEDLIEMERVFNRMKDKHCQPDSTTYSIMVEAYKKEGM 476

Query: 1470 NDKIYYLEQEKQKIITDH 1523
            NDKIY LEQE+Q+++  +
Sbjct: 477  NDKIYDLEQERQRMMCSY 494