BLASTX nr result

ID: Glycyrrhiza23_contig00006075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006075
         (1372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518333.1| PREDICTED: E3 ubiquitin-protein ligase liste...   590   e-166
ref|XP_002517743.1| conserved hypothetical protein [Ricinus comm...   497   e-138
ref|XP_003632124.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   473   e-131
gb|AER92597.1| hypothetical protein [Linum usitatissimum]             454   e-125
ref|XP_004145301.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   435   e-119

>ref|XP_003518333.1| PREDICTED: E3 ubiquitin-protein ligase listerin-like [Glycine max]
          Length = 1885

 Score =  590 bits (1521), Expect = e-166
 Identities = 290/356 (81%), Positives = 315/356 (88%)
 Frame = -2

Query: 1068 STEDSLPFIDVDSEIAVHLKRLGRKDPXXXXXXXXXLSVLLQQRYTKEIVLIVPQWSFEY 889
            S+EDSLPF+DVDSEIAVHLKRLGRKDP         LS+LLQ++  KEIVLIVPQW+FEY
Sbjct: 51   SSEDSLPFVDVDSEIAVHLKRLGRKDPTTKLKALAALSMLLQEKSAKEIVLIVPQWAFEY 110

Query: 888  KRLLLDYNREVRRATHDTMTVLVTSVGRDLAPHLKTLMGPWWFAQFDPVSEVSQAAKRSF 709
            KRLLLDYNREVRRATHDTMT LVTS+GRDLAPHLK LMGPWWFAQFDPVSEVSQAAKRS 
Sbjct: 111  KRLLLDYNREVRRATHDTMTALVTSIGRDLAPHLKILMGPWWFAQFDPVSEVSQAAKRSL 170

Query: 708  QAAFPAQDKRLDALILCSTEIFMYLEENLMLTPQNLSDKAAAMDELEEMYQQXXXXXXXX 529
            QAAFPAQDKRLDALILC+TEIFMYLEENL LTPQNLSDKA A DELEE+YQQ        
Sbjct: 171  QAAFPAQDKRLDALILCTTEIFMYLEENLKLTPQNLSDKAVATDELEEIYQQVISSTLLA 230

Query: 528  XXXXXXXXICPQQERPGFENITTEPKHASKARVAAVSFGEKLLTDHKYFLDFLKSQRPTI 349
                    IC QQ++PGFE+IT+EPKHASKARVAAVSF EKL  DHKYFLDFL+SQRPTI
Sbjct: 231  LATLLDVLICLQQDQPGFESITSEPKHASKARVAAVSFAEKLFKDHKYFLDFLRSQRPTI 290

Query: 348  RSATYSLLKSLIKNMPQAINEGNIKILAGAILGAFNEKDPTCHPSMWDVILLFSRNFPGG 169
            RSATYS+LKSLIKN+PQAIN+GN+K +AGAILGAFNEKDPTCHPSMWD+I+LFSR FP G
Sbjct: 291  RSATYSVLKSLIKNVPQAINDGNMKTVAGAILGAFNEKDPTCHPSMWDLIILFSRKFPDG 350

Query: 168  WTSLNVQKSILNPFWNFLRNGCFGSHQVSYPALVLFLDNVPPKAVGGDKFYLEFFK 1
            W+SLN+QKSILNPFWNFLRNGCFGS QVSYPALVLFLDNVPPK+VGGDKF+LEFFK
Sbjct: 351  WSSLNIQKSILNPFWNFLRNGCFGSQQVSYPALVLFLDNVPPKSVGGDKFFLEFFK 406


>ref|XP_002517743.1| conserved hypothetical protein [Ricinus communis]
            gi|223543141|gb|EEF44675.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1912

 Score =  497 bits (1279), Expect = e-138
 Identities = 238/355 (67%), Positives = 284/355 (80%)
 Frame = -2

Query: 1068 STEDSLPFIDVDSEIAVHLKRLGRKDPXXXXXXXXXLSVLLQQRYTKEIVLIVPQWSFEY 889
            +TE+S  F+D+DSE+A+HLKRL RKDP         LS+L +++  K++VLIVPQW+FEY
Sbjct: 46   TTEESTSFLDIDSEVALHLKRLARKDPTTKLKALQSLSLLFKKKSGKDLVLIVPQWAFEY 105

Query: 888  KRLLLDYNREVRRATHDTMTVLVTSVGRDLAPHLKTLMGPWWFAQFDPVSEVSQAAKRSF 709
            K+LLLDYNREVRRATH+TM  LV +VGRDLAPHLK+LMGPWWF+QFDPVSEVS AAK S 
Sbjct: 106  KKLLLDYNREVRRATHETMNSLVVAVGRDLAPHLKSLMGPWWFSQFDPVSEVSLAAKCSL 165

Query: 708  QAAFPAQDKRLDALILCSTEIFMYLEENLMLTPQNLSDKAAAMDELEEMYQQXXXXXXXX 529
            QAAFPAQ+KRLDALILC+TE+FMYLEENL LTPQ++S+KA A+DELE+M+QQ        
Sbjct: 166  QAAFPAQEKRLDALILCTTEVFMYLEENLKLTPQSMSNKAIALDELEDMHQQVISSSLLA 225

Query: 528  XXXXXXXXICPQQERPGFENITTEPKHASKARVAAVSFGEKLLTDHKYFLDFLKSQRPTI 349
                    +C Q ERPGFEN+  E K+ASKAR  A+SF EKLL+ HKYFLDF+KS  P I
Sbjct: 226  LATLLDVLVCVQSERPGFENVAAELKYASKARATAISFAEKLLSAHKYFLDFMKSHSPVI 285

Query: 348  RSATYSLLKSLIKNMPQAINEGNIKILAGAILGAFNEKDPTCHPSMWDVILLFSRNFPGG 169
            RSATYS LKS +KN+P A NEGN+K+LA AILGAF EKDPTCH SMWD  LLFS+ FP  
Sbjct: 286  RSATYSALKSFMKNIPHAFNEGNMKVLAAAILGAFQEKDPTCHSSMWDAFLLFSKRFPES 345

Query: 168  WTSLNVQKSILNPFWNFLRNGCFGSHQVSYPALVLFLDNVPPKAVGGDKFYLEFF 4
            WT +N+QK +LN FW+FLRNGCFGS QVSYPALVLFL  VPPK + G+KF+L+FF
Sbjct: 346  WTLVNIQKIVLNRFWHFLRNGCFGSQQVSYPALVLFLGTVPPKLIAGEKFFLDFF 400


>ref|XP_003632124.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            listerin-like [Vitis vinifera]
          Length = 1923

 Score =  473 bits (1217), Expect = e-131
 Identities = 234/376 (62%), Positives = 285/376 (75%), Gaps = 16/376 (4%)
 Frame = -2

Query: 1080 DPSLSTED---SLPFIDVDSEIAVHLKRLGRKDPXXXXXXXXXLSVLLQQRYTKEIVLIV 910
            D SL++E+      F+D+DSE+A HLKRL RKDP         LS+LL+Q+  KEIVLI+
Sbjct: 44   DSSLASEEFSVCFNFLDIDSEMAQHLKRLARKDPTTKLKALTCLSMLLKQKSGKEIVLII 103

Query: 909  PQWSFEYKRLLLDYNREVRRATHDTMTVLVTSVGRDLAPHLKTLMGPWWFAQFDPVSEVS 730
            PQW+FEYK+LL+DYNREVRRATHDTMT LV +VGRDLA HLK+LMGPWWF+QFD + EV+
Sbjct: 104  PQWAFEYKKLLMDYNREVRRATHDTMTNLVLAVGRDLALHLKSLMGPWWFSQFDQIPEVA 163

Query: 729  QAAKRSFQ-------------AAFPAQDKRLDALILCSTEIFMYLEENLMLTPQNLSDKA 589
            Q AK S Q             AAFPA +KRLDALILC+TEIFMYL+ENL LTPQ++SDK 
Sbjct: 164  QGAKHSLQVFSSFLTTXSLIXAAFPAPEKRLDALILCTTEIFMYLDENLKLTPQSMSDKV 223

Query: 588  AAMDELEEMYQQXXXXXXXXXXXXXXXXICPQQERPGFENITTEPKHASKARVAAVSFGE 409
             A+DELEEM+QQ                +  Q E+PGFE+IT EPKHASKAR  A+SF E
Sbjct: 224  TALDELEEMHQQVISSSLLALATLIDILVGSQLEKPGFESITAEPKHASKARATAISFAE 283

Query: 408  KLLTDHKYFLDFLKSQRPTIRSATYSLLKSLIKNMPQAINEGNIKILAGAILGAFNEKDP 229
            KL + H+YFLDF+KSQ P IRSATYS+L+S IKN+P A NE N+K LA  ILG+F EKDP
Sbjct: 284  KLFSSHRYFLDFVKSQSPAIRSATYSMLRSCIKNIPHAFNEENMKTLASTILGSFQEKDP 343

Query: 228  TCHPSMWDVILLFSRNFPGGWTSLNVQKSILNPFWNFLRNGCFGSHQVSYPALVLFLDNV 49
            +CH SMWD +LLFS+ FP  W S+NVQK +LN FW+FLRNGCFGS Q+SYP+LVLFLD++
Sbjct: 344  SCHSSMWDAMLLFSKRFPDSWRSVNVQKILLNRFWHFLRNGCFGSQQISYPSLVLFLDSL 403

Query: 48   PPKAVGGDKFYLEFFK 1
            PPK + G+KF+LEFF+
Sbjct: 404  PPKEIEGEKFFLEFFQ 419


>gb|AER92597.1| hypothetical protein [Linum usitatissimum]
          Length = 1899

 Score =  454 bits (1169), Expect = e-125
 Identities = 218/360 (60%), Positives = 268/360 (74%)
 Frame = -2

Query: 1080 DPSLSTEDSLPFIDVDSEIAVHLKRLGRKDPXXXXXXXXXLSVLLQQRYTKEIVLIVPQW 901
            D  +S +DS PF+D DSE+A H+KRL RKDP         LS L + +  K++ LI+PQW
Sbjct: 46   DFPVSGDDSAPFLDEDSEVAXHIKRLARKDPVTKLKALQALSALFKVKSGKDMALIIPQW 105

Query: 900  SFEYKRLLLDYNREVRRATHDTMTVLVTSVGRDLAPHLKTLMGPWWFAQFDPVSEVSQAA 721
            +FEYKRLL+DYNREVRRATH+TMT LV ++GRD+AP+L+TLMGPWWF+QFDPVSEVS +A
Sbjct: 106  AFEYKRLLMDYNREVRRATHETMTNLVVTIGRDIAPYLRTLMGPWWFSQFDPVSEVSLSA 165

Query: 720  KRSFQAAFPAQDKRLDALILCSTEIFMYLEENLMLTPQNLSDKAAAMDELEEMYQQXXXX 541
            KRS QAAFPAQ+KRLDA ILC+TEIFMYLEENL LTPQ+LSDKA A+DELE+MY Q    
Sbjct: 166  KRSLQAAFPAQEKRLDAFILCTTEIFMYLEENLKLTPQSLSDKAVALDELEDMYHQAVAS 225

Query: 540  XXXXXXXXXXXXICPQQERPGFENITTEPKHASKARVAAVSFGEKLLTDHKYFLDFLKSQ 361
                           Q E  G EN+  EP++ASKAR  A+SF EKL + HKYFLDFLKSQ
Sbjct: 226  TLLALATLIDVLFSLQSETTGLENVAAEPRNASKARATAISFAEKLFSGHKYFLDFLKSQ 285

Query: 360  RPTIRSATYSLLKSLIKNMPQAINEGNIKILAGAILGAFNEKDPTCHPSMWDVILLFSRN 181
               +R+A YS L S IK++P   N+ NIK +A A+LGAF EKDP C+ S+WD +LLFS+ 
Sbjct: 286  NSAVRTAAYSTLTSFIKSVPHVFNDQNIKTVAVAVLGAFQEKDPACYSSIWDTVLLFSKR 345

Query: 180  FPGGWTSLNVQKSILNPFWNFLRNGCFGSHQVSYPALVLFLDNVPPKAVGGDKFYLEFFK 1
            FP  WT +NVQK+ L  FWNFLR+ CFGS QVSYPAL+LFL+ VP     G++F+LEFF+
Sbjct: 346  FPDSWTIINVQKNFLGRFWNFLRHQCFGSQQVSYPALILFLEAVPSNVAAGERFFLEFFQ 405


>ref|XP_004145301.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            listerin-like [Cucumis sativus]
          Length = 1919

 Score =  435 bits (1119), Expect = e-119
 Identities = 214/376 (56%), Positives = 271/376 (72%), Gaps = 17/376 (4%)
 Frame = -2

Query: 1080 DPSLSTEDSLPFIDVDSEIAVHLKRLGRKDPXXXXXXXXXLSVLLQQRYTKEIVLIVPQW 901
            D SL+ +D+ PF D+D E+A HLKRL RKDP         LS +L+Q+  K++  I+PQW
Sbjct: 46   DYSLTGDDAAPFSDIDGEVAQHLKRLSRKDPTTKLKALASLSEILKQKSGKDVASIIPQW 105

Query: 900  SFEYKRLLLDYNREVRRATHDTMTVLVTSVGRDLAPHLKTLMGPWWFAQFDPVSEVSQAA 721
             FEYK+LL+DYNR+VRRATHDTMT LV + GR++APHLK+LMGPWWF+QFD VSEVSQ+A
Sbjct: 106  VFEYKKLLMDYNRDVRRATHDTMTNLVMAAGREIAPHLKSLMGPWWFSQFDSVSEVSQSA 165

Query: 720  KRSFQ---------------AAFPAQDKRLDALILCSTEIFMYLEENLMLTPQNLSDKAA 586
             +S Q               AAFPAQ+KR+DALILC+TEIF+YLEENL LTP  LS+K  
Sbjct: 166  MQSLQVCYXRNVTNXPFLLQAAFPAQEKRVDALILCTTEIFIYLEENLKLTPDTLSEKVV 225

Query: 585  AMDELEEMYQQXXXXXXXXXXXXXXXXICPQQERPGFENITTEPKHASKARV--AAVSFG 412
            A DELEEM+QQ                +  + ER G    + E KHASK+R    A+SF 
Sbjct: 226  AKDELEEMHQQVISSSLLALATLIDVLVSGRSERSGTGKSSGETKHASKSRSRETAISFA 285

Query: 411  EKLLTDHKYFLDFLKSQRPTIRSATYSLLKSLIKNMPQAINEGNIKILAGAILGAFNEKD 232
            EKL T+HKYF+D LKS+   +R ATYS+++SL+KN+P A  E N+K +AG+ILGAF EKD
Sbjct: 286  EKLFTEHKYFIDLLKSKSNIVRFATYSVMRSLVKNIPHAFKEQNMKTIAGSILGAFQEKD 345

Query: 231  PTCHPSMWDVILLFSRNFPGGWTSLNVQKSILNPFWNFLRNGCFGSHQVSYPALVLFLDN 52
            P+CH  MW+ +LLFS+  P  WT +NVQK++LN FWNFLRNGCFGS ++SYP L+LFLD 
Sbjct: 346  PSCHSPMWEAVLLFSKRLPNCWTYVNVQKTVLNRFWNFLRNGCFGSQKISYPTLILFLDT 405

Query: 51   VPPKAVGGDKFYLEFF 4
            VPP+AVGG+KF L+FF
Sbjct: 406  VPPRAVGGEKFLLDFF 421


Top