BLASTX nr result

ID: Glycyrrhiza23_contig00006059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006059
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553925.1| PREDICTED: chloride channel protein CLC-b-li...   140   8e-32
ref|XP_003618847.1| Chloride channel protein CLC-a [Medicago tru...   130   9e-29
ref|NP_001236494.1| chloride channel [Glycine max] gi|66220164|g...   129   3e-28
ref|XP_002273594.2| PREDICTED: chloride channel protein CLC-b [V...   126   2e-27
gb|ADK66982.1| chloride channel ClC4 [Vitis vinifera]                 126   2e-27

>ref|XP_003553925.1| PREDICTED: chloride channel protein CLC-b-like [Glycine max]
          Length = 790

 Score =  140 bits (354), Expect = 8e-32
 Identities = 77/108 (71%), Positives = 80/108 (74%)
 Frame = -3

Query: 400 MEMFVDLHPLTNTTPFTVLESMSVAKALVLFRQVGLRHLLVVPKYQASGXXXXXXXXXXX 221
           MEMFVDLHPLTNTTPFTVLESMSVAKA++LFRQVGLRHLLVVPKYQASG           
Sbjct: 707 MEMFVDLHPLTNTTPFTVLESMSVAKAMILFRQVGLRHLLVVPKYQASG----------- 755

Query: 220 XXXXXXXXXXXXXXXXVIGILTRQDLLAHNILTVFPHLAKTKGREKRN 77
                           VIGILTRQDLLAHNILTVFPHLA +KGREKRN
Sbjct: 756 -------------VSPVIGILTRQDLLAHNILTVFPHLAISKGREKRN 790


>ref|XP_003618847.1| Chloride channel protein CLC-a [Medicago truncatula]
           gi|355493862|gb|AES75065.1| Chloride channel protein
           CLC-a [Medicago truncatula]
          Length = 780

 Score =  130 bits (328), Expect = 9e-29
 Identities = 72/108 (66%), Positives = 76/108 (70%)
 Frame = -3

Query: 400 MEMFVDLHPLTNTTPFTVLESMSVAKALVLFRQVGLRHLLVVPKYQASGXXXXXXXXXXX 221
           MEMFVDLHPLTNTTPFTVLESMSVAKA +LFRQVGLRH+LVVPKYQASG           
Sbjct: 697 MEMFVDLHPLTNTTPFTVLESMSVAKARILFRQVGLRHMLVVPKYQASG----------- 745

Query: 220 XXXXXXXXXXXXXXXXVIGILTRQDLLAHNILTVFPHLAKTKGREKRN 77
                           VIGILTRQDLLA+NIL VFPHL  +KGREK N
Sbjct: 746 -------------VSPVIGILTRQDLLAYNILPVFPHLENSKGREKSN 780


>ref|NP_001236494.1| chloride channel [Glycine max] gi|66220164|gb|AAY43007.1| chloride
           channel [Glycine max]
          Length = 783

 Score =  129 bits (323), Expect = 3e-28
 Identities = 71/102 (69%), Positives = 75/102 (73%)
 Frame = -3

Query: 400 MEMFVDLHPLTNTTPFTVLESMSVAKALVLFRQVGLRHLLVVPKYQASGXXXXXXXXXXX 221
           MEMFVDLHPLTNTTPFTVLESMSVAKA+VLFRQVGLRH+LVVPKYQASG           
Sbjct: 704 MEMFVDLHPLTNTTPFTVLESMSVAKAMVLFRQVGLRHMLVVPKYQASG----------- 752

Query: 220 XXXXXXXXXXXXXXXXVIGILTRQDLLAHNILTVFPHLAKTK 95
                           VIGILTRQDLLA+NILTVFPHLAK+K
Sbjct: 753 -------------VSPVIGILTRQDLLAYNILTVFPHLAKSK 781


>ref|XP_002273594.2| PREDICTED: chloride channel protein CLC-b [Vitis vinifera]
           gi|296082356|emb|CBI21361.3| unnamed protein product
           [Vitis vinifera]
          Length = 789

 Score =  126 bits (316), Expect = 2e-27
 Identities = 67/108 (62%), Positives = 77/108 (71%)
 Frame = -3

Query: 400 MEMFVDLHPLTNTTPFTVLESMSVAKALVLFRQVGLRHLLVVPKYQASGXXXXXXXXXXX 221
           MEM+VDLHPLTNTTP+TV+ESMSVAKA+VLFRQVGLRH+L+VPKYQA+G           
Sbjct: 706 MEMYVDLHPLTNTTPYTVVESMSVAKAMVLFRQVGLRHMLIVPKYQAAG----------- 754

Query: 220 XXXXXXXXXXXXXXXXVIGILTRQDLLAHNILTVFPHLAKTKGREKRN 77
                           V+GILTRQDL A+NILT FPHLAK+K REK N
Sbjct: 755 -------------VSPVVGILTRQDLRAYNILTAFPHLAKSKEREKGN 789


>gb|ADK66982.1| chloride channel ClC4 [Vitis vinifera]
          Length = 789

 Score =  126 bits (316), Expect = 2e-27
 Identities = 67/108 (62%), Positives = 77/108 (71%)
 Frame = -3

Query: 400 MEMFVDLHPLTNTTPFTVLESMSVAKALVLFRQVGLRHLLVVPKYQASGXXXXXXXXXXX 221
           MEM+VDLHPLTNTTP+TV+ESMSVAKA+VLFRQVGLRH+L+VPKYQA+G           
Sbjct: 706 MEMYVDLHPLTNTTPYTVVESMSVAKAMVLFRQVGLRHMLIVPKYQAAG----------- 754

Query: 220 XXXXXXXXXXXXXXXXVIGILTRQDLLAHNILTVFPHLAKTKGREKRN 77
                           V+GILTRQDL A+NILT FPHLAK+K REK N
Sbjct: 755 -------------VSPVVGILTRQDLRAYNILTAFPHLAKSKEREKGN 789


Top