BLASTX nr result

ID: Glycyrrhiza23_contig00006024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006024
         (852 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532340.1| PREDICTED: 60S ribosomal protein L2, mitocho...   226   4e-57
ref|NP_001238387.1| uncharacterized protein LOC100527336 [Glycin...   220   3e-55
gb|ACJ84815.1| unknown [Medicago truncatula]                          209   5e-52
ref|YP_003587363.1| ribosomal protein L2 [Cucurbita pepo] gi|259...   145   1e-32
ref|YP_001661414.1| ribosomal protein L2 [Cycas taitungensis] gi...   145   1e-32

>ref|XP_003532340.1| PREDICTED: 60S ribosomal protein L2, mitochondrial-like [Glycine
           max]
          Length = 204

 Score =  226 bits (577), Expect = 4e-57
 Identities = 131/221 (59%), Positives = 148/221 (66%), Gaps = 2/221 (0%)
 Frame = +3

Query: 30  MSGMKRALRQFTFGTGKTAGRNSSGRITSFHRGGGAKRLQRTVDLKRNTTSSLGVVERIE 209
           MSG+KRALRQFTFGTGKTAGRNS+GRITSFHRGGGAKRLQRTVD KRNT SSLGVVERIE
Sbjct: 1   MSGVKRALRQFTFGTGKTAGRNSAGRITSFHRGGGAKRLQRTVDHKRNTASSLGVVERIE 60

Query: 210 YDPNRSSRIALVRWLNGLHPPQPRXXXXXXXXXXXXPRVLRFDPXXXXXXXXXXXXXXXX 389
           YDPNRSS+IALVRW+ G+H  + R            P++L  DP                
Sbjct: 61  YDPNRSSKIALVRWIEGVHHRRRR----AASANAASPKLLHLDP----------ATNDAN 106

Query: 390 XIRGVFALNSMLP--QAGTASGNVFLSAFSAKEGKGKSESVPLQLGLPRIXXXXXXXXXX 563
            IRGVFALNSMLP   AGT+S  +FLSA ++K    +SESV   LG+PR           
Sbjct: 107 SIRGVFALNSMLPHTHAGTSSRELFLSALASKAKGSESESVS-SLGIPRFAVAAARAPFF 165

Query: 564 XXXXRXXXXXXALQVRNWKRNSDAWAHRNKRKAAISWHSIA 686
               R       L+VR+W+RNSDAWAHRNKRKAAISW SIA
Sbjct: 166 AQRAR---GEETLEVRHWRRNSDAWAHRNKRKAAISWQSIA 203


>ref|NP_001238387.1| uncharacterized protein LOC100527336 [Glycine max]
           gi|255632113|gb|ACU16409.1| unknown [Glycine max]
          Length = 204

 Score =  220 bits (561), Expect = 3e-55
 Identities = 128/221 (57%), Positives = 145/221 (65%), Gaps = 2/221 (0%)
 Frame = +3

Query: 30  MSGMKRALRQFTFGTGKTAGRNSSGRITSFHRGGGAKRLQRTVDLKRNTTSSLGVVERIE 209
           MSG+KRALRQ TFGTGKTAGRNS+GRITSFHRGGGAKRLQRTVD KRNT SSLGVVERIE
Sbjct: 1   MSGVKRALRQCTFGTGKTAGRNSAGRITSFHRGGGAKRLQRTVDHKRNTASSLGVVERIE 60

Query: 210 YDPNRSSRIALVRWLNGLHPPQPRXXXXXXXXXXXXPRVLRFDPXXXXXXXXXXXXXXXX 389
           YDPNRSS+IALVRW+ G+H                 P++L  DP                
Sbjct: 61  YDPNRSSKIALVRWIEGVH----HRRRQAASANAASPKLLHLDP----------AATDAN 106

Query: 390 XIRGVFALNSMLP--QAGTASGNVFLSAFSAKEGKGKSESVPLQLGLPRIXXXXXXXXXX 563
            IRGVFALNSMLP   AGT+S  +FLSA ++K    +SESV   LG+PR           
Sbjct: 107 SIRGVFALNSMLPHAHAGTSSRELFLSALASKAKGSESESVS-SLGIPRF---AVAAARA 162

Query: 564 XXXXRXXXXXXALQVRNWKRNSDAWAHRNKRKAAISWHSIA 686
               +       L+VR+W+RNSDAWAHRNKRKAAISW SIA
Sbjct: 163 PFFAQRAIGEETLEVRHWRRNSDAWAHRNKRKAAISWQSIA 203


>gb|ACJ84815.1| unknown [Medicago truncatula]
          Length = 208

 Score =  209 bits (533), Expect = 5e-52
 Identities = 123/224 (54%), Positives = 142/224 (63%), Gaps = 7/224 (3%)
 Frame = +3

Query: 36  GMKRALRQFTFGTGKTAGRNSSGRITSFHRGGGAKRLQRTVDLKRNTTSSLGVVERIEYD 215
           G+KR+LRQFTFG GKTAGRN  GRITSFHRGGG KRL R +DLKRNT+SS+G+VERIEYD
Sbjct: 4   GVKRSLRQFTFGAGKTAGRNCYGRITSFHRGGGHKRLHRVIDLKRNTSSSVGIVERIEYD 63

Query: 216 PNRSSRIALVRWLNGLHPPQPR----XXXXXXXXXXXXPRVLRFDPXXXXXXXXXXXXXX 383
           PNRSSRIALVRWLNG++PP  R                 R L+ DP              
Sbjct: 64  PNRSSRIALVRWLNGINPPPQRTTTTATAAAVSTASSSSRFLKHDP------------AS 111

Query: 384 XXXIRGVFALNSMLPQ--AGTASGNVFLSAFSAKEGKG-KSESVPLQLGLPRIXXXXXXX 554
              IRGVF LNS+LPQ  AG++SG V LSAFS   GKG +SESV   LGLPRI       
Sbjct: 112 NGEIRGVFGLNSLLPQIHAGSSSGKVLLSAFS---GKGDESESVSSALGLPRIAVAASRP 168

Query: 555 XXXXXXXRXXXXXXALQVRNWKRNSDAWAHRNKRKAAISWHSIA 686
                          L++RNWK++SD W +RNKRK AISW +IA
Sbjct: 169 EFFG----VKGDGEKLEIRNWKKSSDVWMNRNKRKTAISWQNIA 208


>ref|YP_003587363.1| ribosomal protein L2 [Cucurbita pepo] gi|259156826|gb|ACV96687.1|
           ribosomal protein L2 [Cucurbita pepo]
          Length = 332

 Score =  145 bits (365), Expect = 1e-32
 Identities = 98/249 (39%), Positives = 124/249 (49%), Gaps = 28/249 (11%)
 Frame = +3

Query: 18  IRETMSGMKRALRQFTFGTGKTAGRNSSGRITSFHRGGGAKRLQRTVDLKRNTTSSLGVV 197
           +R++  G  RALRQFT  TGK+AGRNSSGRIT FHRGGG+KRLQR +DLKR +TSS+G+V
Sbjct: 1   MRQSQEG--RALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKR-STSSMGIV 57

Query: 198 ERIEYDPNRSSRIALVRWLNGLHPPQ---------PRXXXXXXXXXXXXPRVLRFDPXXX 350
           ERIEYDPNRSSRIALVRW+ G+   +         PR                   P   
Sbjct: 58  ERIEYDPNRSSRIALVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSTPGKV 117

Query: 351 XXXXXXXXXXXXXXIRGVFALNSMLPQAG-------------TASGNVFLSAFSAKEGKG 491
                            V  L + +P                T + +VF SAFS+++ KG
Sbjct: 118 DQRKVACFSPGQMAAYVVVGLPTRIPPCSKSPFTSKGAGSKKTCAKDVFFSAFSSQKTKG 177

Query: 492 KSESVPL--QLGLPRI----XXXXXXXXXXXXXXRXXXXXXALQVRNWKRNSDAWAHRNK 653
           ++ S+     LG PRI                  R        +VR W+ +S  WAHR K
Sbjct: 178 ETASLSFGSSLGFPRIAVAGAKPAFFAPRMREKVRGKNTFSLCEVRKWRTHSILWAHRMK 237

Query: 654 RKAAISWHS 680
           RKAA+ W S
Sbjct: 238 RKAALDWQS 246


>ref|YP_001661414.1| ribosomal protein L2 [Cycas taitungensis]
           gi|166706952|dbj|BAF98416.1| ribosomal protein L2 [Cycas
           taitungensis]
          Length = 477

 Score =  145 bits (365), Expect = 1e-32
 Identities = 97/228 (42%), Positives = 124/228 (54%), Gaps = 7/228 (3%)
 Frame = +3

Query: 18  IRETMSGMKRALRQFTFGTGKTAGRNSSGRITSFHRGGGAKRLQRTVDLKRNTTSSLGVV 197
           +R++     +ALRQFTFGT K+AGRN SGR T FHRGGG+KRLQR +D KR +TSS+G+V
Sbjct: 1   MRKSCLLFSKALRQFTFGTEKSAGRNPSGRTTVFHRGGGSKRLQRRIDSKR-STSSMGIV 59

Query: 198 ERIEYDPNRSSRIALVRWLNGLHPPQPRXXXXXXXXXXXXPRVLRFDPXXXXXXXXXXXX 377
           ERIEYDPNRSSRIALVRW+ G+   + R            PR +  +P            
Sbjct: 60  ERIEYDPNRSSRIALVRWIEGVLLRRQRRTCCNTREEFAPPREI-LEP------------ 106

Query: 378 XXXXXIRGVFALNSMLPQAGTASGNVFLSAFSAKEGKGKSESVP---LQLGLPRI----X 536
                I G+F+ +S LP       +V LSA S+   K ++ + P     LGLPRI     
Sbjct: 107 -TTATIGGLFSFSS-LPGKVDEIKDVLLSAPSSPRAKREAATSPSSGSSLGLPRIAVAGA 164

Query: 537 XXXXXXXXXXXXXRXXXXXXALQVRNWKRNSDAWAHRNKRKAAISWHS 680
                        R        +VR W+ +S  WAHR KRKAA+SW S
Sbjct: 165 KPALFAPRMREELRGKKTFSLCEVRRWRTHSVLWAHRIKRKAALSWQS 212


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