BLASTX nr result

ID: Glycyrrhiza23_contig00005978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005978
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547058.1| PREDICTED: kinetochore protein NDC80 homolog...   162   2e-38
ref|XP_003594432.1| Kinetochore protein NDC80-like protein [Medi...   138   4e-31
ref|XP_002279662.1| PREDICTED: kinetochore protein NDC80 homolog...   128   6e-28
emb|CAN64748.1| hypothetical protein VITISV_041326 [Vitis vinifera]   127   7e-28
ref|XP_002273942.1| PREDICTED: kinetochore protein NDC80 homolog...   126   2e-27

>ref|XP_003547058.1| PREDICTED: kinetochore protein NDC80 homolog [Glycine max]
          Length = 593

 Score =  162 bits (411), Expect = 2e-38
 Identities = 73/91 (80%), Positives = 86/91 (94%)
 Frame = +1

Query: 1   VNSFLSSHNFPVTFRTTSPSAKDIHETLRFLLSVIDFPTSKVEDDLPLLLKHLNYPFKLN 180
           +NSFLSSHNFP+TF+TT PSAKDIHETL+FLLS++DFP SK+E+DLP LLK LNYPFKLN
Sbjct: 67  INSFLSSHNFPITFKTTLPSAKDIHETLKFLLSLLDFPFSKLEEDLPPLLKRLNYPFKLN 126

Query: 181 KSILKSPAAPHQWPSILALIHWLVQLSRFHL 273
           KSIL+SPAAPHQWP+ LALIHWLVQ+++FHL
Sbjct: 127 KSILRSPAAPHQWPTFLALIHWLVQIAKFHL 157


>ref|XP_003594432.1| Kinetochore protein NDC80-like protein [Medicago truncatula]
           gi|355483480|gb|AES64683.1| Kinetochore protein
           NDC80-like protein [Medicago truncatula]
          Length = 575

 Score =  138 bits (348), Expect = 4e-31
 Identities = 64/92 (69%), Positives = 79/92 (85%), Gaps = 1/92 (1%)
 Frame = +1

Query: 1   VNSFLSSHNFPVTFRTT-SPSAKDIHETLRFLLSVIDFPTSKVEDDLPLLLKHLNYPFKL 177
           +NSFLSSHNF ++F+++ SPSAK IHETL FL  +++FP +K+EDDLPLLLK  NYPFKL
Sbjct: 60  INSFLSSHNFHISFKSSPSPSAKQIHETLIFLTKLLEFPVTKLEDDLPLLLKLFNYPFKL 119

Query: 178 NKSILKSPAAPHQWPSILALIHWLVQLSRFHL 273
           NKSILK+PA PHQWPS+L LIHWLVQ+  F+L
Sbjct: 120 NKSILKNPATPHQWPSMLCLIHWLVQICNFNL 151


>ref|XP_002279662.1| PREDICTED: kinetochore protein NDC80 homolog [Vitis vinifera]
          Length = 571

 Score =  128 bits (321), Expect = 6e-28
 Identities = 55/90 (61%), Positives = 75/90 (83%)
 Frame = +1

Query: 1   VNSFLSSHNFPVTFRTTSPSAKDIHETLRFLLSVIDFPTSKVEDDLPLLLKHLNYPFKLN 180
           +NSFL+SH+ P++ +   PSAKDI ETL+FL+S +DFPT+K+EDDLP+LLKHLN P KLN
Sbjct: 69  INSFLASHSSPLSLKPPLPSAKDISETLKFLISQLDFPTTKLEDDLPILLKHLNCPIKLN 128

Query: 181 KSILKSPAAPHQWPSILALIHWLVQLSRFH 270
           KS LK+P  PH WPS+L ++HWLVQ++ ++
Sbjct: 129 KSALKAPGTPHAWPSLLGVMHWLVQIALYN 158


>emb|CAN64748.1| hypothetical protein VITISV_041326 [Vitis vinifera]
          Length = 1261

 Score =  127 bits (320), Expect = 7e-28
 Identities = 55/90 (61%), Positives = 74/90 (82%)
 Frame = +1

Query: 1   VNSFLSSHNFPVTFRTTSPSAKDIHETLRFLLSVIDFPTSKVEDDLPLLLKHLNYPFKLN 180
           +NSFL+SH+ P+  +   PSAKDI ETL+FL+S +DFPT+K+EDDLP+LLKHLN P KLN
Sbjct: 69  INSFLASHSSPLPLKPPLPSAKDISETLKFLISELDFPTTKLEDDLPILLKHLNCPIKLN 128

Query: 181 KSILKSPAAPHQWPSILALIHWLVQLSRFH 270
           KS LK+P  PH WPS+L ++HWLVQ++ ++
Sbjct: 129 KSALKAPGTPHSWPSLLGVMHWLVQIALYN 158


>ref|XP_002273942.1| PREDICTED: kinetochore protein NDC80 homolog [Vitis vinifera]
          Length = 571

 Score =  126 bits (316), Expect = 2e-27
 Identities = 54/90 (60%), Positives = 74/90 (82%)
 Frame = +1

Query: 1   VNSFLSSHNFPVTFRTTSPSAKDIHETLRFLLSVIDFPTSKVEDDLPLLLKHLNYPFKLN 180
           +NSFL+SH+ P++ +   PSAKDI ETL+FL+S +DFPT+K+EDDLP+LLKHLN P KLN
Sbjct: 69  INSFLASHSSPLSLKPPLPSAKDISETLKFLISQLDFPTTKLEDDLPILLKHLNCPIKLN 128

Query: 181 KSILKSPAAPHQWPSILALIHWLVQLSRFH 270
           KS LK+P  PH WP +L ++HWLVQ++ ++
Sbjct: 129 KSALKAPGTPHAWPPLLGVMHWLVQIALYN 158


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