BLASTX nr result

ID: Glycyrrhiza23_contig00005975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005975
         (681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626592.1| 60s acidic ribosomal protein [Medicago trunc...   119   7e-25
gb|AFK44680.1| unknown [Lotus japonicus]                              117   2e-24
ref|XP_003521825.1| PREDICTED: 60S acidic ribosomal protein P1-3...   103   2e-20
ref|XP_002524416.1| 60S acidic ribosomal protein P1, putative [R...   102   5e-20
ref|NP_001235153.1| uncharacterized protein LOC100305677 [Glycin...   102   9e-20

>ref|XP_003626592.1| 60s acidic ribosomal protein [Medicago truncatula]
           gi|355501607|gb|AES82810.1| 60s acidic ribosomal protein
           [Medicago truncatula]
          Length = 113

 Score =  119 bits (297), Expect = 7e-25
 Identities = 68/113 (60%), Positives = 75/113 (66%), Gaps = 2/113 (1%)
 Frame = -1

Query: 585 MSLGETACSYALLILEDDKIPATADNIAALLKSAKVEVESYWPSLFAKLAEKKNLRDLIA 406
           MSLGETACSYALLILEDD IPATADNI +LLKSAKV+VES+WP+LFAKLAEKKN+RDLIA
Sbjct: 1   MSLGETACSYALLILEDDNIPATADNITSLLKSAKVDVESFWPALFAKLAEKKNIRDLIA 60

Query: 405 N-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEP-QEESDEEMGFSLFDE 253
           +                                  EP +EESDEEMGF LFDE
Sbjct: 61  SAAGGGAPGVAVAAAPAAASGGGAAAAPAAAEKKPEPEEEESDEEMGFGLFDE 113


>gb|AFK44680.1| unknown [Lotus japonicus]
          Length = 110

 Score =  117 bits (293), Expect = 2e-24
 Identities = 65/110 (59%), Positives = 73/110 (66%)
 Frame = -1

Query: 585 MSLGETACSYALLILEDDKIPATADNIAALLKSAKVEVESYWPSLFAKLAEKKNLRDLIA 406
           MSLGETACSYALLILEDDKI ATADNI+ LLK+A V+VESYW  LFAKLAEKKNL+DLIA
Sbjct: 1   MSLGETACSYALLILEDDKIAATADNISTLLKTANVKVESYWAPLFAKLAEKKNLQDLIA 60

Query: 405 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEPQEESDEEMGFSLFD 256
           +                                EEP+EESD++MGFSLFD
Sbjct: 61  SAAGGGGSVAVAAAPVAAASGGASAAAPVEEKKEEPKEESDDDMGFSLFD 110


>ref|XP_003521825.1| PREDICTED: 60S acidic ribosomal protein P1-3-like [Glycine max]
          Length = 112

 Score =  103 bits (258), Expect = 2e-20
 Identities = 60/112 (53%), Positives = 68/112 (60%), Gaps = 2/112 (1%)
 Frame = -1

Query: 585 MSLGETACSYALLILEDDKIPATADNIAALLKSAKVEVESYWPSLFAKLAEKKNLRDLIA 406
           MSLGETACSYA LIL +D I  TAD I+ LLK+AKV V+SYWP+LFAKLAEKKNL DLIA
Sbjct: 1   MSLGETACSYAALILHEDGISVTADKISTLLKTAKVPVDSYWPTLFAKLAEKKNLGDLIA 60

Query: 405 N--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEPQEESDEEMGFSLFD 256
           N                                  EEP+EESD++MGF LFD
Sbjct: 61  NAAGGGAPVAVAAAPVAAAAGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 112


>ref|XP_002524416.1| 60S acidic ribosomal protein P1, putative [Ricinus communis]
           gi|223536300|gb|EEF37951.1| 60S acidic ribosomal protein
           P1, putative [Ricinus communis]
          Length = 110

 Score =  102 bits (255), Expect = 5e-20
 Identities = 55/110 (50%), Positives = 66/110 (60%)
 Frame = -1

Query: 585 MSLGETACSYALLILEDDKIPATADNIAALLKSAKVEVESYWPSLFAKLAEKKNLRDLIA 406
           M+ GE AC+YA LIL DD IP T++ IA L+K+A V VESYWPSLFAKLAEKKN+ DL+ 
Sbjct: 1   MAAGELACTYATLILHDDGIPVTSEKIATLVKAANVAVESYWPSLFAKLAEKKNIDDLVM 60

Query: 405 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEPQEESDEEMGFSLFD 256
           N                                EEP+EESD++MGFSLFD
Sbjct: 61  NVGSGGGAAPVAVSAPAAGAGAAAAAPAVEEKKEEPKEESDDDMGFSLFD 110


>ref|NP_001235153.1| uncharacterized protein LOC100305677 [Glycine max]
           gi|255626283|gb|ACU13486.1| unknown [Glycine max]
          Length = 113

 Score =  102 bits (253), Expect = 9e-20
 Identities = 58/113 (51%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
 Frame = -1

Query: 585 MSLGETACSYALLILEDDKIPATADNIAALLKSAKVEVESYWPSLFAKLAEKKNLRDLIA 406
           MSLGETACSYA LIL +D I  TAD I+ LL++AKV+V++YWP+LFAKLAEKKNL DLIA
Sbjct: 1   MSLGETACSYAALILHEDGISVTADKISTLLETAKVQVDTYWPTLFAKLAEKKNLGDLIA 60

Query: 405 N---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEPQEESDEEMGFSLFD 256
           N                                   EEP+EESD++MGF LFD
Sbjct: 61  NAAGGGAPVAVAAAPVAASGGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 113


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