BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005940
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604069.1| Replication factor C subunit [Medicago trunc...   186   1e-45
ref|XP_002320575.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
ref|XP_002533677.1| Replication factor C subunit, putative [Rici...    69   3e-10
ref|XP_002303425.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002265263.2| PREDICTED: uncharacterized protein LOC100265...    64   1e-08

>ref|XP_003604069.1| Replication factor C subunit [Medicago truncatula]
            gi|355493117|gb|AES74320.1| Replication factor C subunit
            [Medicago truncatula]
          Length = 800

 Score =  186 bits (473), Expect = 1e-45
 Identities = 95/124 (76%), Positives = 106/124 (85%)
 Frame = +3

Query: 6    IAKNIIEEQSLRQLYAIRRKLQSLMIHDVPPDFIYKSLVAGLTSLIDVSLRSGVSQLDKE 185
            IA+NII EQS RQLYAIR+KLQSLMIHDVPPDFIYKSLVA LTSL+D SL SGV++L K+
Sbjct: 679  IARNIITEQSPRQLYAIRKKLQSLMIHDVPPDFIYKSLVANLTSLVDDSLCSGVTKLGKD 738

Query: 186  YNKAAEIKFESVKQIGCAQNKHGGSDEKYNELTKRNVMSYLKVEEFIAKFMSWYKNSCKN 365
            Y K   IKFE VK    AQNK GGSDEK N+LTK+N M+YLKVEEFIAKFMSWYKNSCK+
Sbjct: 739  YTKGGAIKFEGVKHY--AQNKQGGSDEKNNKLTKKNAMNYLKVEEFIAKFMSWYKNSCKS 796

Query: 366  NNHV 377
            N+HV
Sbjct: 797  NDHV 800


>ref|XP_002320575.1| predicted protein [Populus trichocarpa] gi|222861348|gb|EEE98890.1|
           predicted protein [Populus trichocarpa]
          Length = 725

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 49/127 (38%), Positives = 81/127 (63%), Gaps = 2/127 (1%)
 Frame = +3

Query: 6   IAKNIIEEQSLRQLYAIRRKLQSLMIHDVPPDFIYKSLVAGLTSLIDVSLRSGVSQLDKE 185
           IAK+++EEQS +QLY IR KLQ+L+ HDV PDF ++SL+  L   +D   +  +  L K+
Sbjct: 579 IAKDMVEEQSPKQLYIIRGKLQNLIEHDVSPDFFFESLLGELKKHLDEPFQLQLDGLHKD 638

Query: 186 YNKAAEIKFE-SVKQIGCAQNKHGGSDEKYNELTKRNV-MSYLKVEEFIAKFMSWYKNSC 359
           YN+      E S  ++   +++H  + ++ ++  ++N    ++++EEFIAKFMS+YK S 
Sbjct: 639 YNRNDGNMLEISENELIFLRSRHEEAGKRLHDPARKNADHLFVRIEEFIAKFMSFYKISV 698

Query: 360 KNNNHVQ 380
            NN  +Q
Sbjct: 699 TNNKSIQ 705


>ref|XP_002533677.1| Replication factor C subunit, putative [Ricinus communis]
           gi|223526428|gb|EEF28707.1| Replication factor C
           subunit, putative [Ricinus communis]
          Length = 661

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 44/125 (35%), Positives = 64/125 (51%)
 Frame = +3

Query: 6   IAKNIIEEQSLRQLYAIRRKLQSLMIHDVPPDFIYKSLVAGLTSLIDVSLRSGVSQLDKE 185
           IAKN+I+EQS +QLY IR KLQ L+ HDV P+FI+ +L+  L   +D   +  +  L K+
Sbjct: 553 IAKNMIQEQSPKQLYIIRGKLQKLIEHDVSPEFIFNTLLDELKKHLDEFCQGQLDLLYKD 612

Query: 186 YNKAAEIKFESVKQIGCAQNKHGGSDEKYNELTKRNVMSYLKVEEFIAKFMSWYKNSCKN 365
           YN+      E+  Q+    ++H                   +  EFIAKFMS YK     
Sbjct: 613 YNRKDGNMLEAENQLRFPHSRH-------------------EEAEFIAKFMSLYKLHITT 653

Query: 366 NNHVQ 380
           +  +Q
Sbjct: 654 SKRMQ 658


>ref|XP_002303425.1| predicted protein [Populus trichocarpa] gi|222840857|gb|EEE78404.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/115 (31%), Positives = 65/115 (56%)
 Frame = +3

Query: 6   IAKNIIEEQSLRQLYAIRRKLQSLMIHDVPPDFIYKSLVAGLTSLIDVSLRSGVSQLDKE 185
           IA +IIEEQS ++L+  R+KLQ L+ H++ P F++ +LV  L   +D  ++  +    + 
Sbjct: 318 IATSIIEEQSSKRLFLFRQKLQILLQHNLCPQFVFFTLVEELKRHLDDRIQMQIGVFTQT 377

Query: 186 YNKAAEIKFESVKQIGCAQNKHGGSDEKYNELTKRNVMSYLKVEEFIAKFMSWYK 350
           YN       +  + +   + K    +E +    +  V  ++++EEF+AKFMS+YK
Sbjct: 378 YN-------DDNEDLCIERKKMRNQEELFCGQMRTRVAGFVRIEEFVAKFMSFYK 425


>ref|XP_002265263.2| PREDICTED: uncharacterized protein LOC100265748 [Vitis vinifera]
          Length = 659

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 6/112 (5%)
 Frame = +3

Query: 3   KIAKNIIEEQSLRQLYAIRRKLQSLMIHDVPPDFIYKSLVAGLTSLIDVSLRS--GVSQL 176
           +IAKNIIEEQ+ +QLY IR KLQ L  H+V  +FIYK+LVA L   ++ S       S  
Sbjct: 548 RIAKNIIEEQTPKQLYNIRGKLQKLTEHNVASEFIYKTLVAQLKMQLNCSYLQIRFDSIF 607

Query: 177 DKEYNKAAEIKFESVKQI----GCAQNKHGGSDEKYNELTKRNVMSYLKVEE 320
           D  Y +   ++ E    +       +N+H    ++ N+ T++N    LK+E+
Sbjct: 608 DDYYREEGSMQKEDGSMLETDRSFVRNRHEEMGKRLNDPTRKNAHDVLKIED 659