BLASTX nr result

ID: Glycyrrhiza23_contig00005934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005934
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236361.1| uncharacterized protein LOC100527203 [Glycin...   125   5e-27
ref|XP_003591237.1| Zinc finger matrin type 5 [Medicago truncatu...   122   4e-26
emb|CBI39646.3| unnamed protein product [Vitis vinifera]              118   4e-25
gb|ADE76311.1| unknown [Picea sitchensis]                             113   1e-23
ref|XP_004135569.1| PREDICTED: zinc finger CCCH domain-containin...   112   3e-23

>ref|NP_001236361.1| uncharacterized protein LOC100527203 [Glycine max]
           gi|255631776|gb|ACU16255.1| unknown [Glycine max]
          Length = 127

 Score =  125 bits (313), Expect = 5e-27
 Identities = 66/137 (48%), Positives = 75/137 (54%)
 Frame = -2

Query: 411 MPARKYYCDYCDKQFQDTPSDRKRHLRGIQHQQAKARWYDSXXXXXXXXXXXXXXXXXXX 232
           MP +KYYCDYCDK FQDTP+DRKRH++GIQH QAKARWYDS                   
Sbjct: 1   MPVKKYYCDYCDKLFQDTPADRKRHVQGIQHHQAKARWYDS-----FKQQQIPPIPNRPL 55

Query: 231 XXXFLNTGFCRYADSCKYFHPNAXXXXXXXXXITSTLGQXXXXXXXXXXXXXXXXXNFPP 52
              F+NTGFCRY DSCKY HP           +T+                     N PP
Sbjct: 56  CFHFVNTGFCRYGDSCKYLHPVPNNNVRQPPIVTT-------PSPSPGSVVGVSFGNLPP 108

Query: 51  SLQPPPEGGYPHLPFVD 1
           SLQPPP+G Y HLPF+D
Sbjct: 109 SLQPPPDGVYLHLPFLD 125


>ref|XP_003591237.1| Zinc finger matrin type 5 [Medicago truncatula]
           gi|355480285|gb|AES61488.1| Zinc finger matrin type 5
           [Medicago truncatula] gi|388501098|gb|AFK38615.1|
           unknown [Medicago truncatula]
          Length = 122

 Score =  122 bits (305), Expect = 4e-26
 Identities = 65/137 (47%), Positives = 74/137 (54%)
 Frame = -2

Query: 411 MPARKYYCDYCDKQFQDTPSDRKRHLRGIQHQQAKARWYDSXXXXXXXXXXXXXXXXXXX 232
           M  +KYYC+YCDKQFQDT  DRKRH  GIQH+QAK+RWYDS                   
Sbjct: 1   MAMKKYYCEYCDKQFQDTHLDRKRHSAGIQHKQAKSRWYDS-------FKPEHHNPIPPF 53

Query: 231 XXXFLNTGFCRYADSCKYFHPNAXXXXXXXXXITSTLGQXXXXXXXXXXXXXXXXXNFPP 52
              F+NTGFCRY DSCKYFHPN            + +G                  N PP
Sbjct: 54  CFHFVNTGFCRYGDSCKYFHPNTQQQQPITTTPGNIVGD----------TMGVSFGNLPP 103

Query: 51  SLQPPPEGGYPHLPFVD 1
           SLQPPPE GY +LPF+D
Sbjct: 104 SLQPPPEVGYSNLPFLD 120


>emb|CBI39646.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score =  118 bits (296), Expect = 4e-25
 Identities = 67/153 (43%), Positives = 76/153 (49%), Gaps = 16/153 (10%)
 Frame = -2

Query: 411 MPARKYYCDYCDKQFQDTPSDRKRHLRGIQHQQAKARWYDSXXXXXXXXXXXXXXXXXXX 232
           MP  KY+CDYCDKQFQDTPS RKRHL+G+QHQ+AKA WYDS                   
Sbjct: 1   MPLGKYHCDYCDKQFQDTPSARKRHLQGLQHQRAKALWYDS---FRDPNQIQAEGYGKGV 57

Query: 231 XXXFLNTGFCRYADSCKYFHPNAXXXXXXXXXITST----------------LGQXXXXX 100
              F+ TGFC+Y DSCKYFHP           I  T                +G      
Sbjct: 58  CNRFVRTGFCQYGDSCKYFHPKQSLQNTNTQSIPVTGFPDNIQSLSNPGNQLVGGGPLPG 117

Query: 99  XXXXXXXXXXXXNFPPSLQPPPEGGYPHLPFVD 1
                       N PPSL+PPPEGGYP LPF+D
Sbjct: 118 NVVKDSMGNSWGNLPPSLKPPPEGGYPPLPFLD 150


>gb|ADE76311.1| unknown [Picea sitchensis]
          Length = 126

 Score =  113 bits (283), Expect = 1e-23
 Identities = 60/138 (43%), Positives = 73/138 (52%), Gaps = 1/138 (0%)
 Frame = -2

Query: 411 MPARKYYCDYCDKQFQDTPSDRKRHLRGIQHQQAKARWYDSXXXXXXXXXXXXXXXXXXX 232
           MP  KYYCDYCDKQFQDTPS RKRHL+G+QHQ+A+  W+DS                   
Sbjct: 1   MPLEKYYCDYCDKQFQDTPSARKRHLQGVQHQRARKLWFDS---FKDPQQLHAENAGKAI 57

Query: 231 XXXFLNTGFCRYADSCKYFHP-NAXXXXXXXXXITSTLGQXXXXXXXXXXXXXXXXXNFP 55
              F+ TGFC++ D+CKYFHP                +GQ                 N P
Sbjct: 58  CTRFVKTGFCQFGDNCKYFHPVQNIEQHAGVHSGEQAIGQ-----------VVISSINLP 106

Query: 54  PSLQPPPEGGYPHLPFVD 1
           PSL+PPPE G+P LPF+D
Sbjct: 107 PSLRPPPEVGHPQLPFID 124


>ref|XP_004135569.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
           [Cucumis sativus] gi|449508616|ref|XP_004163363.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           3-like [Cucumis sativus]
          Length = 156

 Score =  112 bits (280), Expect = 3e-23
 Identities = 64/155 (41%), Positives = 71/155 (45%), Gaps = 18/155 (11%)
 Frame = -2

Query: 411 MPARKYYCDYCDKQFQDTPSDRKRHLRGIQHQQAKARWYDSXXXXXXXXXXXXXXXXXXX 232
           MP  KYYCDYCDKQFQDTP  RKRHL+ + HQ+AKA W+DS                   
Sbjct: 1   MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDS-FKDFNQSFPHSFHFRPRI 59

Query: 231 XXXFLNTGFCRYADSCKYFHPNAXXXXXXXXXITSTL------------------GQXXX 106
              FL+TGFC+Y DSCKYFHPN                                 G    
Sbjct: 60  CNRFLSTGFCQYGDSCKYFHPNNNNDNTYNSSSYPMAGFPENYQPPNVPVNRFVDGNSSS 119

Query: 105 XXXXXXXXXXXXXXNFPPSLQPPPEGGYPHLPFVD 1
                         N PPSL PPP+GGYP LPFVD
Sbjct: 120 TGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVD 154


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