BLASTX nr result

ID: Glycyrrhiza23_contig00005927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005927
         (1610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629967.1| Aminomethyltransferase [Medicago truncatula]...   720   0.0  
ref|XP_003525008.1| PREDICTED: aminomethyltransferase-like [Glyc...   697   0.0  
ref|XP_002269147.1| PREDICTED: aminomethyltransferase [Vitis vin...   607   e-171
ref|XP_002529546.1| fad oxidoreductase, putative [Ricinus commun...   582   e-164
ref|NP_176295.3| aminomethyltransferase [Arabidopsis thaliana] g...   559   e-157

>ref|XP_003629967.1| Aminomethyltransferase [Medicago truncatula]
            gi|355523989|gb|AET04443.1| Aminomethyltransferase
            [Medicago truncatula]
          Length = 422

 Score =  720 bits (1859), Expect = 0.0
 Identities = 363/422 (86%), Positives = 384/422 (90%), Gaps = 3/422 (0%)
 Frame = +3

Query: 150  MTTVSLATCLSLRNQTCRLSVL-PKPCFPRNLGFWSHQR--KQKQLISWSISAHSSPFDL 320
            MTT+SL +C +LRNQ    S L  KPC   NL F SHQR  K K  IS+SISA SS FDL
Sbjct: 1    MTTLSLPSCFNLRNQPWSPSSLFLKPCLLPNLSFCSHQRNKKNKNQISYSISAQSSSFDL 60

Query: 321  SPPPIDHDFLDTVKTSGAEVSGEGIIETFHNDEEALDAVDNGVVVVDLSHFGRIRVSGED 500
            SPPPIDHDFLDTVKT+GAEVSGEGI+ETFHNDEEALDA DNGVVVVDLSHFGRIRVSG+D
Sbjct: 61   SPPPIDHDFLDTVKTAGAEVSGEGIVETFHNDEEALDAADNGVVVVDLSHFGRIRVSGDD 120

Query: 501  RIQFLHNQSTANFECLQAGQGCDTVFVTPTARTIDIAHAWVMKSAVTLVVSPETCGPITE 680
            R+QFLHNQSTANFE LQAGQGCDTVFVTPTARTIDIAHAW+MK+A+TLVVS ET   ITE
Sbjct: 121  RVQFLHNQSTANFEGLQAGQGCDTVFVTPTARTIDIAHAWIMKNAITLVVSAETSRTITE 180

Query: 681  MLNKYIFFADKVEIQDITKQTSLFALVGPKSGQVMENLNLGDLVGKPYGTHQHFNVDKQP 860
            MLNKYIFFADKVEIQDITKQTSLF L GPKSGQVME+LNLGDL+GKPYGTHQHF VDKQP
Sbjct: 181  MLNKYIFFADKVEIQDITKQTSLFVLAGPKSGQVMESLNLGDLIGKPYGTHQHFYVDKQP 240

Query: 861  VTIGVGNIVSEGGFSLMMSPAAAPSVWKAILAQGAVPMGSNAWNKLRVIQGRPAPGMELT 1040
            +TIGVGNI+SEGGFSLMMSPAAAPSVWKAILAQGAV MGSNAWNKLRVIQGRPAPGMELT
Sbjct: 241  ITIGVGNIISEGGFSLMMSPAAAPSVWKAILAQGAVAMGSNAWNKLRVIQGRPAPGMELT 300

Query: 1041 KEFNVLEACLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLHLSAAAEPGSIITVDGK 1220
             EFNV+EACLWNSISLNKGCYKGQETI+RLITYDGVKQRLWG HLSAAAEPGSIITVDGK
Sbjct: 301  NEFNVMEACLWNSISLNKGCYKGQETIARLITYDGVKQRLWGFHLSAAAEPGSIITVDGK 360

Query: 1221 KVGKLTSYASGRKQSEHFGLGYI*RQAASEGDTVIVGDNISGTVVELPYLSQQRPLSGSS 1400
            KVGKLTSYASGRK SEHFGLGYI RQ ASEGD+VIVGDNI GT+VE P+LSQQRPLSGSS
Sbjct: 361  KVGKLTSYASGRKPSEHFGLGYIKRQTASEGDSVIVGDNIIGTIVEAPFLSQQRPLSGSS 420

Query: 1401 NS 1406
            +S
Sbjct: 421  SS 422


>ref|XP_003525008.1| PREDICTED: aminomethyltransferase-like [Glycine max]
          Length = 423

 Score =  697 bits (1798), Expect = 0.0
 Identities = 345/405 (85%), Positives = 368/405 (90%), Gaps = 4/405 (0%)
 Frame = +3

Query: 195  TCRLSVLPKPCFPRNLGFWSH----QRKQKQLISWSISAHSSPFDLSPPPIDHDFLDTVK 362
            T RLSVLP     RN  F SH    + K+K+L+SWSI A  SPFDLSPPPIDHDFLDTVK
Sbjct: 24   TWRLSVLP-----RNAAFLSHHHLMKEKKKKLMSWSIGAQPSPFDLSPPPIDHDFLDTVK 78

Query: 363  TSGAEVSGEGIIETFHNDEEALDAVDNGVVVVDLSHFGRIRVSGEDRIQFLHNQSTANFE 542
            T+G E+SGEGIIETFHND+EAL AVDNGVVVVDLSHFGRIRVSGEDRIQFLHNQSTANFE
Sbjct: 79   TAGGEISGEGIIETFHNDDEALAAVDNGVVVVDLSHFGRIRVSGEDRIQFLHNQSTANFE 138

Query: 543  CLQAGQGCDTVFVTPTARTIDIAHAWVMKSAVTLVVSPETCGPITEMLNKYIFFADKVEI 722
             L  GQGCDTVFVTPTARTIDIAHAW+MK+A+TLVVSPETC  ITEMLNKYIFFADKVEI
Sbjct: 139  SLHEGQGCDTVFVTPTARTIDIAHAWLMKNAITLVVSPETCTTITEMLNKYIFFADKVEI 198

Query: 723  QDITKQTSLFALVGPKSGQVMENLNLGDLVGKPYGTHQHFNVDKQPVTIGVGNIVSEGGF 902
            QDITKQTS F LVGPKSGQVMENLNLGDLVGKPYGTH HFNVDKQP+TIGVGNI+SE GF
Sbjct: 199  QDITKQTSFFVLVGPKSGQVMENLNLGDLVGKPYGTHLHFNVDKQPITIGVGNIISEDGF 258

Query: 903  SLMMSPAAAPSVWKAILAQGAVPMGSNAWNKLRVIQGRPAPGMELTKEFNVLEACLWNSI 1082
            SL+MSPAAA S+WKAIL+QGA+PMGSNAWNKLR+I+GRP PGMELT EFNVLEACLWNS+
Sbjct: 259  SLLMSPAAAASIWKAILSQGAIPMGSNAWNKLRIIRGRPTPGMELTNEFNVLEACLWNSV 318

Query: 1083 SLNKGCYKGQETISRLITYDGVKQRLWGLHLSAAAEPGSIITVDGKKVGKLTSYASGRKQ 1262
            SLNKGCYKGQETISRLITYDG+KQRLWG HLSAAAEPGSIITVDGKKVGKLTSY SGRKQ
Sbjct: 319  SLNKGCYKGQETISRLITYDGIKQRLWGFHLSAAAEPGSIITVDGKKVGKLTSYTSGRKQ 378

Query: 1263 SEHFGLGYI*RQAASEGDTVIVGDNISGTVVELPYLSQQRPLSGS 1397
            SEHFGLGYI R+AASEGDTVIVGDNI GTVVE+P+L QQRP SGS
Sbjct: 379  SEHFGLGYIKRRAASEGDTVIVGDNIKGTVVEVPFLLQQRPPSGS 423


>ref|XP_002269147.1| PREDICTED: aminomethyltransferase [Vitis vinifera]
            gi|298204501|emb|CBI23776.3| unnamed protein product
            [Vitis vinifera]
          Length = 430

 Score =  607 bits (1564), Expect = e-171
 Identities = 301/368 (81%), Positives = 325/368 (88%)
 Frame = +3

Query: 297  AHSSPFDLSPPPIDHDFLDTVKTSGAEVSGEGIIETFHNDEEALDAVDNGVVVVDLSHFG 476
            A +SPFDLSPPPID D LDTV  +GAEVS  GIIETF ND+EALDAVDNGVVVVDLSHFG
Sbjct: 61   AAASPFDLSPPPIDLDLLDTVTEAGAEVSEAGIIETFDNDDEALDAVDNGVVVVDLSHFG 120

Query: 477  RIRVSGEDRIQFLHNQSTANFECLQAGQGCDTVFVTPTARTIDIAHAWVMKSAVTLVVSP 656
            RIRVSG+DRIQFLHNQSTANFECLQ GQGCDTVFVTPTARTID+AHAW+MK+AVTLVVSP
Sbjct: 121  RIRVSGDDRIQFLHNQSTANFECLQEGQGCDTVFVTPTARTIDVAHAWIMKNAVTLVVSP 180

Query: 657  ETCGPITEMLNKYIFFADKVEIQDITKQTSLFALVGPKSGQVMENLNLGDLVGKPYGTHQ 836
             TCG I EML KYIFFADKVEIQDITK+TS F LVGPKS QVME+LNLG LVGKPYGTHQ
Sbjct: 181  VTCGSIIEMLTKYIFFADKVEIQDITKKTSFFVLVGPKSHQVMEDLNLGALVGKPYGTHQ 240

Query: 837  HFNVDKQPVTIGVGNIVSEGGFSLMMSPAAAPSVWKAILAQGAVPMGSNAWNKLRVIQGR 1016
            HF V+  P+T+GVGN +SE GFS MMSPA A SVWKA+L+QGA+PMGSNAW KLR+ QGR
Sbjct: 241  HFMVNGMPITVGVGNAISEDGFSFMMSPAIAGSVWKALLSQGAIPMGSNAWEKLRIFQGR 300

Query: 1017 PAPGMELTKEFNVLEACLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLHLSAAAEPG 1196
            PAPG ELT EFNVLEA LWNSISLNKGCYKGQETISRLITYDGVKQRLWG+ LS  AEPG
Sbjct: 301  PAPGKELTNEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGISLSGPAEPG 360

Query: 1197 SIITVDGKKVGKLTSYASGRKQSEHFGLGYI*RQAASEGDTVIVGDNISGTVVELPYLSQ 1376
            S IT DGKKVGKLTSYA GR +SEHFGLGYI RQAAS G+TVIVGDNI+GTVVE+P+L+ 
Sbjct: 361  SPITADGKKVGKLTSYACGRTESEHFGLGYIKRQAASNGNTVIVGDNIAGTVVEVPFLAW 420

Query: 1377 QRPLSGSS 1400
            Q P S SS
Sbjct: 421  QSPPSKSS 428


>ref|XP_002529546.1| fad oxidoreductase, putative [Ricinus communis]
            gi|223530994|gb|EEF32849.1| fad oxidoreductase, putative
            [Ricinus communis]
          Length = 433

 Score =  582 bits (1500), Expect = e-164
 Identities = 288/392 (73%), Positives = 328/392 (83%), Gaps = 9/392 (2%)
 Frame = +3

Query: 258  QRKQKQLISWSISAHS---------SPFDLSPPPIDHDFLDTVKTSGAEVSGEGIIETFH 410
            + K K+L   SIS +S         SPFDLSPPPIDHDFL+TV   GA+VS +GIIETF 
Sbjct: 42   ENKNKKLTFTSISFNSVACTRISASSPFDLSPPPIDHDFLETVAADGAKVSEDGIIETFD 101

Query: 411  NDEEALDAVDNGVVVVDLSHFGRIRVSGEDRIQFLHNQSTANFECLQAGQGCDTVFVTPT 590
            ND+EAL A  N VV++DLSHFGRIRVSG+DRIQFLHNQSTANF+CL  GQGC TVFVTPT
Sbjct: 102  NDDEALLAFHNSVVILDLSHFGRIRVSGDDRIQFLHNQSTANFQCLHEGQGCHTVFVTPT 161

Query: 591  ARTIDIAHAWVMKSAVTLVVSPETCGPITEMLNKYIFFADKVEIQDITKQTSLFALVGPK 770
            ART+DIAHAW+MK++V LVVSP TCG IT+MLNKYIFFAD VEIQDITK+TS F L GP+
Sbjct: 162  ARTLDIAHAWIMKNSVMLVVSPVTCGSITQMLNKYIFFADNVEIQDITKKTSFFILAGPQ 221

Query: 771  SGQVMENLNLGDLVGKPYGTHQHFNVDKQPVTIGVGNIVSEGGFSLMMSPAAAPSVWKAI 950
            S QVM NLNLGD+VG+PYGTH H++V+  P+T+G GNI+SE G+SL+MS AAA SVWK +
Sbjct: 222  SDQVMANLNLGDVVGQPYGTHLHYSVNGMPITVGAGNIISEYGYSLLMSSAAAESVWKTL 281

Query: 951  LAQGAVPMGSNAWNKLRVIQGRPAPGMELTKEFNVLEACLWNSISLNKGCYKGQETISRL 1130
            L+QGAVPMGSNAW KLR+IQG PAPG ELT EFNVLEA LWNSISLNKGCYKGQETI+RL
Sbjct: 282  LSQGAVPMGSNAWEKLRIIQGIPAPGKELTNEFNVLEAGLWNSISLNKGCYKGQETIARL 341

Query: 1131 ITYDGVKQRLWGLHLSAAAEPGSIITVDGKKVGKLTSYASGRKQSEHFGLGYI*RQAASE 1310
            ITYDGVKQRLWG+HLSA AEPGS+ITVDG KVGKLTSY SGR + EH+GLGYI RQ  SE
Sbjct: 342  ITYDGVKQRLWGIHLSAPAEPGSLITVDGIKVGKLTSYTSGRNKPEHYGLGYIKRQTVSE 401

Query: 1311 GDTVIVGDNISGTVVELPYLSQQRPLSGSSNS 1406
            G TVIVGD I GTVV+ P+L++QRP S S NS
Sbjct: 402  GSTVIVGDKIVGTVVDPPFLARQRPPSNSPNS 433


>ref|NP_176295.3| aminomethyltransferase [Arabidopsis thaliana]
            gi|145326078|ref|NP_001077748.1| aminomethyltransferase
            [Arabidopsis thaliana] gi|186492130|ref|NP_001117522.1|
            aminomethyltransferase [Arabidopsis thaliana]
            gi|51969110|dbj|BAD43247.1| unnamed protein product
            [Arabidopsis thaliana] gi|332195639|gb|AEE33760.1|
            aminomethyltransferase [Arabidopsis thaliana]
            gi|332195640|gb|AEE33761.1| aminomethyltransferase
            [Arabidopsis thaliana] gi|332195641|gb|AEE33762.1|
            aminomethyltransferase [Arabidopsis thaliana]
          Length = 432

 Score =  559 bits (1441), Expect = e-157
 Identities = 278/419 (66%), Positives = 333/419 (79%)
 Frame = +3

Query: 150  MTTVSLATCLSLRNQTCRLSVLPKPCFPRNLGFWSHQRKQKQLISWSISAHSSPFDLSPP 329
            +T  +L  CL       R S+  + C     GF   + ++ QL   S S+ S  FD SPP
Sbjct: 22   ITNTALLPCLYNGTVLRRRSLSLRKC-----GF---RERKFQLRCVSASSDSLQFDFSPP 73

Query: 330  PIDHDFLDTVKTSGAEVSGEGIIETFHNDEEALDAVDNGVVVVDLSHFGRIRVSGEDRIQ 509
            PIDHDFLDT+  SG +VS +G++E+F ND+EALDA DNGVVVVDLSHFGRIRVSG+DR  
Sbjct: 74   PIDHDFLDTISVSGGKVSEDGVVESFDNDDEALDAFDNGVVVVDLSHFGRIRVSGDDRAH 133

Query: 510  FLHNQSTANFECLQAGQGCDTVFVTPTARTIDIAHAWVMKSAVTLVVSPETCGPITEMLN 689
            FLHNQ+TANFE L  GQGCDTVFVTPTARTIDIAHAW+MK+A+ L VSP TC  I EMLN
Sbjct: 134  FLHNQTTANFESLYEGQGCDTVFVTPTARTIDIAHAWIMKNAILLTVSPTTCQSIIEMLN 193

Query: 690  KYIFFADKVEIQDITKQTSLFALVGPKSGQVMENLNLGDLVGKPYGTHQHFNVDKQPVTI 869
            KYIFFADKVEI+DITKQT LFAL GPKS Q+M  LNLGDL+G+PYG HQH++ D  P+T+
Sbjct: 194  KYIFFADKVEIKDITKQTCLFALAGPKSNQIMSKLNLGDLIGQPYGRHQHYSFDGMPITV 253

Query: 870  GVGNIVSEGGFSLMMSPAAAPSVWKAILAQGAVPMGSNAWNKLRVIQGRPAPGMELTKEF 1049
            GVG+++S+ GF+++MSP  A SVWK +LA+GA+PMGS AW KLR+ QGRPAP  EL+KEF
Sbjct: 254  GVGSLISDEGFTMLMSPGGAVSVWKTLLAEGAIPMGSVAWEKLRITQGRPAPERELSKEF 313

Query: 1050 NVLEACLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLHLSAAAEPGSIITVDGKKVG 1229
            NVLEA LWNSISLNKGCYKGQETI+RL+TYDG+KQRL GL+LSA +EPGS ITVDGKKVG
Sbjct: 314  NVLEAGLWNSISLNKGCYKGQETIARLMTYDGIKQRLCGLNLSAPSEPGSTITVDGKKVG 373

Query: 1230 KLTSYASGRKQSEHFGLGYI*RQAASEGDTVIVGDNISGTVVELPYLSQQRPLSGSSNS 1406
            KLTSY  G+  S HFGLGYI +QAAS G+TV VG++ISG V E+PYL++Q P S +S+S
Sbjct: 374  KLTSYTGGKNGSGHFGLGYIKKQAASIGNTVTVGEDISGIVSEVPYLARQHPPSANSSS 432


Top