BLASTX nr result

ID: Glycyrrhiza23_contig00005926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005926
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638525.1| Lysine-specific demethylase 5B [Medicago tru...   111   7e-23
ref|XP_003528124.1| PREDICTED: lysine-specific demethylase REF6-...    97   1e-18
ref|XP_003522415.1| PREDICTED: lysine-specific demethylase REF6-...    95   5e-18
ref|XP_003528125.1| PREDICTED: lysine-specific demethylase REF6-...    82   3e-14
ref|XP_003522416.1| PREDICTED: lysine-specific demethylase REF6-...    80   2e-13

>ref|XP_003638525.1| Lysine-specific demethylase 5B [Medicago truncatula]
           gi|355504460|gb|AES85663.1| Lysine-specific demethylase
           5B [Medicago truncatula]
          Length = 1621

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/75 (70%), Positives = 63/75 (84%)
 Frame = +3

Query: 18  DQSFEKQDHETTLRVAFKNTEAMPYSTAYSSQDAHDAEKSLSAKAMVPGNNKNASLVPQS 197
           DQSFE+QD++ T   AF+NT AMPYST YSS+D +DAEKSLS +A+VP N+KN  LVPQ 
Sbjct: 747 DQSFEEQDYKITSGAAFENTRAMPYSTTYSSRDTNDAEKSLSIEAIVPVNHKNVLLVPQC 806

Query: 198 DEDSSRMHVFCLEHA 242
           DE+SSRMHVFCLEHA
Sbjct: 807 DEESSRMHVFCLEHA 821


>ref|XP_003528124.1| PREDICTED: lysine-specific demethylase REF6-like [Glycine max]
          Length = 1586

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 48/78 (61%), Positives = 59/78 (75%)
 Frame = +3

Query: 12  SSDQSFEKQDHETTLRVAFKNTEAMPYSTAYSSQDAHDAEKSLSAKAMVPGNNKNASLVP 191
           S D S +KQD+  T  V F+NT+ +P  T+  SQ  HDA++SLS K+MVP +NKN S+V 
Sbjct: 709 SVDHSLKKQDYNITSEVKFENTKMVPNFTSNCSQHTHDADRSLSNKSMVPFDNKNTSMVL 768

Query: 192 QSDEDSSRMHVFCLEHAA 245
           QSDEDSSRMHVFCLEHAA
Sbjct: 769 QSDEDSSRMHVFCLEHAA 786


>ref|XP_003522415.1| PREDICTED: lysine-specific demethylase REF6-like [Glycine max]
          Length = 1567

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/78 (60%), Positives = 59/78 (75%)
 Frame = +3

Query: 12  SSDQSFEKQDHETTLRVAFKNTEAMPYSTAYSSQDAHDAEKSLSAKAMVPGNNKNASLVP 191
           S D S +KQD+  T  V F+NT  +P ST+  SQ AH+A++SLS K+MV  +NKN S+V 
Sbjct: 687 SLDHSLKKQDYNITSGVTFENTRTVPNSTSNCSQQAHNADRSLSNKSMVAFDNKNTSMVL 746

Query: 192 QSDEDSSRMHVFCLEHAA 245
           Q+DEDSSRMHVFCLEHAA
Sbjct: 747 QADEDSSRMHVFCLEHAA 764


>ref|XP_003528125.1| PREDICTED: lysine-specific demethylase REF6-like [Glycine max]
          Length = 1565

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 40/60 (66%), Positives = 50/60 (83%)
 Frame = +3

Query: 66  FKNTEAMPYSTAYSSQDAHDAEKSLSAKAMVPGNNKNASLVPQSDEDSSRMHVFCLEHAA 245
           F+NT  +P ST+  SQDA+DA++SLS+K+MVP + K A +V QSDEDSSRMHVFCLEHAA
Sbjct: 704 FENTRTVPNSTSNCSQDAYDAKRSLSSKSMVPFDYKKALMVLQSDEDSSRMHVFCLEHAA 763


>ref|XP_003522416.1| PREDICTED: lysine-specific demethylase REF6-like [Glycine max]
          Length = 1552

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/61 (68%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
 Frame = +3

Query: 66  FKNTEAMPYSTAYSSQDAHDAEKSLSAKAM-VPGNNKNASLVPQSDEDSSRMHVFCLEHA 242
           F+NT  +  ST+  SQDAH+AE+SLS  AM VP +NK AS+V QSDEDSSRMHVFCLEHA
Sbjct: 687 FENTRTVANSTSNCSQDAHNAERSLSNNAMMVPFDNKKASMVLQSDEDSSRMHVFCLEHA 746

Query: 243 A 245
           A
Sbjct: 747 A 747


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