BLASTX nr result

ID: Glycyrrhiza23_contig00005922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005922
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607861.1| LOB domain-containing protein [Medicago trun...   268   4e-70
ref|XP_003529442.1| PREDICTED: LOB domain-containing protein 4-l...   253   1e-65
ref|NP_001236751.1| uncharacterized protein LOC100306560 [Glycin...   248   5e-64
ref|XP_002297935.1| predicted protein [Populus trichocarpa] gi|2...   241   6e-62
ref|XP_002304584.1| predicted protein [Populus trichocarpa] gi|2...   238   6e-61

>ref|XP_003607861.1| LOB domain-containing protein [Medicago truncatula]
           gi|355508916|gb|AES90058.1| LOB domain-containing
           protein [Medicago truncatula]
          Length = 174

 Score =  268 bits (685), Expect = 4e-70
 Identities = 140/168 (83%), Positives = 144/168 (85%), Gaps = 3/168 (1%)
 Frame = +2

Query: 47  RKQGAPSPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLAEHQ 226
           +KQGA SPCAACKLLRRRCAQDC+FAPYFPADEP KFANVHKVFGASNVNKMLQDL EHQ
Sbjct: 8   KKQGAASPCAACKLLRRRCAQDCLFAPYFPADEPHKFANVHKVFGASNVNKMLQDLPEHQ 67

Query: 227 RGDAVSSMVYEANARVRDPVYGCVGAISSXXXXXXXXXXXXAVAQAEAVHLRVRQTASSL 406
           RGDAVSSMVYEANARVRDPVYGCVGAISS            AVAQAEAVHLRVRQTASS 
Sbjct: 68  RGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAVAQAEAVHLRVRQTASSF 127

Query: 407 WNNA--SEHSPTYSGSPSYSKINES-QAKPLFDMDMVVDHAAYGDSMW 541
           WN+A  S  SPTYSGSPS SKINES QAK +FDMDMVVD AAYGDSMW
Sbjct: 128 WNSAGHSPTSPTYSGSPS-SKINESQQAKNIFDMDMVVDQAAYGDSMW 174


>ref|XP_003529442.1| PREDICTED: LOB domain-containing protein 4-like [Glycine max]
          Length = 159

 Score =  253 bits (647), Expect = 1e-65
 Identities = 133/165 (80%), Positives = 135/165 (81%)
 Frame = +2

Query: 47  RKQGAPSPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLAEHQ 226
           RKQGAPSPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLAEHQ
Sbjct: 6   RKQGAPSPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLAEHQ 65

Query: 227 RGDAVSSMVYEANARVRDPVYGCVGAISSXXXXXXXXXXXXAVAQAEAVHLRVRQTASSL 406
           RGDAVSSMVYEANARVRDPVYGCVGAISS            AVAQAEAVHLRVRQTAS  
Sbjct: 66  RGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAVAQAEAVHLRVRQTASLY 125

Query: 407 WNNASEHSPTYSGSPSYSKINESQAKPLFDMDMVVDHAAYGDSMW 541
               S  SPT SGSP       SQAKP+FDMDMVVD  +YGDSMW
Sbjct: 126 ----SPTSPTNSGSP-------SQAKPIFDMDMVVDQNSYGDSMW 159


>ref|NP_001236751.1| uncharacterized protein LOC100306560 [Glycine max]
           gi|255628883|gb|ACU14786.1| unknown [Glycine max]
          Length = 159

 Score =  248 bits (633), Expect = 5e-64
 Identities = 130/165 (78%), Positives = 132/165 (80%)
 Frame = +2

Query: 47  RKQGAPSPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLAEHQ 226
           RKQGAPSPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDL EHQ
Sbjct: 6   RKQGAPSPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPEHQ 65

Query: 227 RGDAVSSMVYEANARVRDPVYGCVGAISSXXXXXXXXXXXXAVAQAEAVHLRVRQTASSL 406
           RGDAVSSMVYEANARVRDPVYGCVGAISS            AVAQAEAVHLRVRQ AS  
Sbjct: 66  RGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAVAQAEAVHLRVRQAASLY 125

Query: 407 WNNASEHSPTYSGSPSYSKINESQAKPLFDMDMVVDHAAYGDSMW 541
               S  SPT SGSP       SQAKP+FDMDMVVD   YGDS+W
Sbjct: 126 ----SPTSPTNSGSP-------SQAKPIFDMDMVVDQTPYGDSIW 159


>ref|XP_002297935.1| predicted protein [Populus trichocarpa] gi|222845193|gb|EEE82740.1|
           predicted protein [Populus trichocarpa]
          Length = 170

 Score =  241 bits (615), Expect = 6e-62
 Identities = 124/165 (75%), Positives = 135/165 (81%)
 Frame = +2

Query: 47  RKQGAPSPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLAEHQ 226
           RKQGAP+PCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQ+L  HQ
Sbjct: 6   RKQGAPAPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQ 65

Query: 227 RGDAVSSMVYEANARVRDPVYGCVGAISSXXXXXXXXXXXXAVAQAEAVHLRVRQTASSL 406
           RGDAVSSMVYEANARVRDPVYGCVGAISS            A+AQAE VHLRVRQTA+  
Sbjct: 66  RGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVRQTATLS 125

Query: 407 WNNASEHSPTYSGSPSYSKINESQAKPLFDMDMVVDHAAYGDSMW 541
            +  S  SP+ SGSPS S++  SQ KP+FDMDM VDH + G+SMW
Sbjct: 126 NHGLSPASPSNSGSPS-SRLMGSQMKPMFDMDM-VDHTSLGESMW 168


>ref|XP_002304584.1| predicted protein [Populus trichocarpa] gi|222842016|gb|EEE79563.1|
           predicted protein [Populus trichocarpa]
          Length = 170

 Score =  238 bits (606), Expect = 6e-61
 Identities = 123/165 (74%), Positives = 133/165 (80%)
 Frame = +2

Query: 47  RKQGAPSPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLAEHQ 226
           RKQGAPSPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQ+L  HQ
Sbjct: 6   RKQGAPSPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQ 65

Query: 227 RGDAVSSMVYEANARVRDPVYGCVGAISSXXXXXXXXXXXXAVAQAEAVHLRVRQTASSL 406
           RGDAVSSMVYEANARVRDPVYGCVGAISS            A+AQAE VHLRVRQTA+  
Sbjct: 66  RGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVVHLRVRQTATLS 125

Query: 407 WNNASEHSPTYSGSPSYSKINESQAKPLFDMDMVVDHAAYGDSMW 541
            +     SP  SGSPS S++  SQ KP+FDM+M VDH + G+SMW
Sbjct: 126 NHGPPPASPGNSGSPS-SRLMGSQMKPIFDMEM-VDHTSLGESMW 168


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