BLASTX nr result

ID: Glycyrrhiza23_contig00005899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005899
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550833.1| PREDICTED: uncharacterized protein LOC100795...   255   2e-66
ref|XP_003609252.1| RNA binding protein [Medicago truncatula] gi...   252   2e-65
ref|XP_003525657.1| PREDICTED: uncharacterized protein LOC100809...   244   5e-63
gb|ACU24373.1| unknown [Glycine max]                                  242   3e-62
ref|XP_002285023.2| PREDICTED: uncharacterized protein LOC100267...   220   8e-56

>ref|XP_003550833.1| PREDICTED: uncharacterized protein LOC100795963 [Glycine max]
          Length = 404

 Score =  255 bits (652), Expect = 2e-66
 Identities = 116/145 (80%), Positives = 132/145 (91%)
 Frame = +1

Query: 28  MRFKKGTKVEVMSKAEVPSGSWLCGEIISGNGHNYTIRYDGYQGAAGEAIVERVSRKAIR 207
           M+FKKG KVEV+SK EVP GSWLC EII  NGH+YT++YDGY+  AGEAIVERVSRK +R
Sbjct: 1   MKFKKGNKVEVLSKVEVPCGSWLCAEIICSNGHHYTVKYDGYESDAGEAIVERVSRKDLR 60

Query: 208 PCPPTLELTENWSPGDIVEVFQNFSWKMATVLKVLGKKYISVRLLGSSLEFQVSKYDIRV 387
           PCPP LELT+NWSPGD+VE+FQNFSWKMATVLK+LGK +I VRLLGSSLEFQVSK+DIRV
Sbjct: 61  PCPPALELTDNWSPGDVVEIFQNFSWKMATVLKILGKNHILVRLLGSSLEFQVSKFDIRV 120

Query: 388 RQSWQDDKWIVIGKGSASCENGKRS 462
           RQSWQDDKWI++GKGS+SCEN KRS
Sbjct: 121 RQSWQDDKWIIVGKGSSSCENRKRS 145


>ref|XP_003609252.1| RNA binding protein [Medicago truncatula]
           gi|355510307|gb|AES91449.1| RNA binding protein
           [Medicago truncatula]
          Length = 468

 Score =  252 bits (644), Expect = 2e-65
 Identities = 118/144 (81%), Positives = 131/144 (90%)
 Frame = +1

Query: 28  MRFKKGTKVEVMSKAEVPSGSWLCGEIISGNGHNYTIRYDGYQGAAGEAIVERVSRKAIR 207
           MRFKKGTKVEV+SKAEVPSGSWLC EII G GH YT+ Y+G++GA  E IVE VS+K+IR
Sbjct: 1   MRFKKGTKVEVLSKAEVPSGSWLCAEIIGGKGHRYTVMYEGFRGAMDEEIVELVSKKSIR 60

Query: 208 PCPPTLELTENWSPGDIVEVFQNFSWKMATVLKVLGKKYISVRLLGSSLEFQVSKYDIRV 387
           PCPP LEL ENW+PGDIVEV+QNFSWKMATVLKVLGKKYISVRLLGSS+EFQVSK+DIRV
Sbjct: 61  PCPPPLELVENWTPGDIVEVYQNFSWKMATVLKVLGKKYISVRLLGSSVEFQVSKFDIRV 120

Query: 388 RQSWQDDKWIVIGKGSASCENGKR 459
           RQSWQDDKW V+GKGSAS +NGKR
Sbjct: 121 RQSWQDDKWFVVGKGSASYDNGKR 144


>ref|XP_003525657.1| PREDICTED: uncharacterized protein LOC100809539 [Glycine max]
          Length = 397

 Score =  244 bits (623), Expect = 5e-63
 Identities = 115/145 (79%), Positives = 129/145 (88%)
 Frame = +1

Query: 28  MRFKKGTKVEVMSKAEVPSGSWLCGEIISGNGHNYTIRYDGYQGAAGEAIVERVSRKAIR 207
           MRFKKG KVEV+SK EVP GSWL  EII GNGH+YT++YDGY+  AGEAIVE+VSRK IR
Sbjct: 1   MRFKKGNKVEVLSKVEVPCGSWLYAEIICGNGHHYTVKYDGYESDAGEAIVEQVSRKDIR 60

Query: 208 PCPPTLELTENWSPGDIVEVFQNFSWKMATVLKVLGKKYISVRLLGSSLEFQVSKYDIRV 387
           PCPP LELT+NW+ GD+VEVFQNFSWKMATVLKV GK +I VRLLGSSLEFQVSK+DIRV
Sbjct: 61  PCPPALELTDNWNSGDVVEVFQNFSWKMATVLKVFGKNHILVRLLGSSLEFQVSKFDIRV 120

Query: 388 RQSWQDDKWIVIGKGSASCENGKRS 462
           RQSWQDDKWI++GKGS+S EN KRS
Sbjct: 121 RQSWQDDKWIIVGKGSSSHENRKRS 145


>gb|ACU24373.1| unknown [Glycine max]
          Length = 170

 Score =  242 bits (617), Expect = 3e-62
 Identities = 114/145 (78%), Positives = 128/145 (88%)
 Frame = +1

Query: 28  MRFKKGTKVEVMSKAEVPSGSWLCGEIISGNGHNYTIRYDGYQGAAGEAIVERVSRKAIR 207
           MRFKKG K EV+SK EVP GSWL  EII GNGH+YT++YDGY+  AGEAIVE+VSRK IR
Sbjct: 1   MRFKKGNKAEVLSKVEVPCGSWLYTEIICGNGHHYTVKYDGYESDAGEAIVEQVSRKDIR 60

Query: 208 PCPPTLELTENWSPGDIVEVFQNFSWKMATVLKVLGKKYISVRLLGSSLEFQVSKYDIRV 387
           PCPP LELT+NW+ GD+VEVFQNFSWKMATVLKV GK +I VRLLGSSLEFQVSK+DIRV
Sbjct: 61  PCPPALELTDNWNSGDVVEVFQNFSWKMATVLKVFGKNHILVRLLGSSLEFQVSKFDIRV 120

Query: 388 RQSWQDDKWIVIGKGSASCENGKRS 462
           RQSWQDDKWI++GKGS+S EN KRS
Sbjct: 121 RQSWQDDKWIIVGKGSSSHENRKRS 145


>ref|XP_002285023.2| PREDICTED: uncharacterized protein LOC100267997 [Vitis vinifera]
          Length = 415

 Score =  220 bits (561), Expect = 8e-56
 Identities = 107/145 (73%), Positives = 118/145 (81%)
 Frame = +1

Query: 28  MRFKKGTKVEVMSKAEVPSGSWLCGEIISGNGHNYTIRYDGYQGAAGEAIVERVSRKAIR 207
           MRFKKG+KVEV+SK +VPSGSW+  EII GNGHNYT+RYDG+Q    EAIVERV   AIR
Sbjct: 1   MRFKKGSKVEVLSKRKVPSGSWISAEIICGNGHNYTVRYDGHQSNIDEAIVERVPGSAIR 60

Query: 208 PCPPTLELTENWSPGDIVEVFQNFSWKMATVLKVLGKKYISVRLLGSSLEFQVSKYDIRV 387
           PCPP +E  E W PGDIVEVF NFSWKMATV KVLGKKY  VR LGSSLEF+V KYD+RV
Sbjct: 61  PCPPPVEGPEGWIPGDIVEVFDNFSWKMATVSKVLGKKYFLVRHLGSSLEFKVRKYDLRV 120

Query: 388 RQSWQDDKWIVIGKGSASCENGKRS 462
           RQSWQDDKWIVIGK S + E+ K S
Sbjct: 121 RQSWQDDKWIVIGKSSGTFEDRKPS 145


Top