BLASTX nr result

ID: Glycyrrhiza23_contig00005806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005806
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552405.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...    75   4e-12
gb|ABD28706.1| Zinc finger, RING-type [Medicago truncatula]            72   6e-11
ref|XP_003624004.1| RING-H2 finger protein ATL5F [Medicago trunc...    72   6e-11
ref|XP_003534549.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...    69   5e-10
gb|ACU23939.1| unknown [Glycine max]                                   69   5e-10

>ref|XP_003552405.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Glycine max]
          Length = 170

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = -3

Query: 202 DHDQKTCPLCRTHFVPYHKMEDYNQRLWDASGVSSFY 92
           DHDQKTCPLCRT FVP+HK+E+YNQRLW ASGVS FY
Sbjct: 125 DHDQKTCPLCRTPFVPHHKLEEYNQRLWAASGVSQFY 161


>gb|ABD28706.1| Zinc finger, RING-type [Medicago truncatula]
          Length = 180

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 28/29 (96%), Positives = 29/29 (100%)
 Frame = -3

Query: 202 DHDQKTCPLCRTHFVPYHKMEDYNQRLWD 116
           DHDQKTCPLCRTHFVPYHKMEDYNQRLW+
Sbjct: 123 DHDQKTCPLCRTHFVPYHKMEDYNQRLWN 151


>ref|XP_003624004.1| RING-H2 finger protein ATL5F [Medicago truncatula]
           gi|355499019|gb|AES80222.1| RING-H2 finger protein ATL5F
           [Medicago truncatula]
          Length = 279

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 28/29 (96%), Positives = 29/29 (100%)
 Frame = -3

Query: 202 DHDQKTCPLCRTHFVPYHKMEDYNQRLWD 116
           DHDQKTCPLCRTHFVPYHKMEDYNQRLW+
Sbjct: 123 DHDQKTCPLCRTHFVPYHKMEDYNQRLWN 151


>ref|XP_003534549.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Glycine max]
          Length = 171

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = -3

Query: 202 DHDQKTCPLCRTHFVPYHKMEDYNQRLWDASGVSSFY 92
           DHDQKTCPLCR+  VP+ K+E+YNQRLW ASGVS FY
Sbjct: 126 DHDQKTCPLCRSTLVPHQKLEEYNQRLWAASGVSQFY 162


>gb|ACU23939.1| unknown [Glycine max]
          Length = 171

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = -3

Query: 202 DHDQKTCPLCRTHFVPYHKMEDYNQRLWDASGVSSFY 92
           DHDQKTCPLCR+  VP+ K+E+YNQRLW ASGVS FY
Sbjct: 126 DHDQKTCPLCRSTLVPHQKLEEYNQRLWAASGVSQFY 162


Top