BLASTX nr result

ID: Glycyrrhiza23_contig00005800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005800
         (829 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD27608.1|AF121903_1 unknown [Nicotiana tabacum]                   86   8e-15
ref|YP_173458.1| hypothetical protein NitaMp120 [Nicotiana tabac...    86   8e-15
gb|AAD27606.1|AF121902_1 unknown [Nicotiana repanda] gi|3138974|...    86   1e-14
ref|YP_002608363.1| PSII 32 kDa protein [Vitis vinifera] gi|2099...    82   1e-13
emb|CBJ20753.1| hypothetical protein [Beta vulgaris subsp. marit...    78   2e-12

>gb|AAD27608.1|AF121903_1 unknown [Nicotiana tabacum]
          Length = 274

 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 46/108 (42%), Positives = 68/108 (62%)
 Frame = +2

Query: 17  ERQRELAQRLSINSISKNLTSREWGSILAAQVVVEKRIEAALVSDGFNAESILAKRHQVR 196
           +R+REL+ RLSIN++ + L      +I+  Q+  E +IE AL SD     SIL KRHQ+R
Sbjct: 156 QRRRELSDRLSINTVKRPLPEDISEAIIETQLQTELKIEEALRSDRVQEGSILEKRHQIR 215

Query: 197 GFLFYPGGTSLTEQTYVNYVKSIDSHGTRACVPYKRVIQAIRQHYLFL 340
           G LFYP G + +  TY++++K I++ GT   + YKR++  I Q  L L
Sbjct: 216 GVLFYPFGRAFSLDTYLDHLKQIENQGTHRSLLYKRLMNEISQEKLEL 263


>ref|YP_173458.1| hypothetical protein NitaMp120 [Nicotiana tabacum]
           gi|56806622|dbj|BAD83523.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 274

 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 46/108 (42%), Positives = 68/108 (62%)
 Frame = +2

Query: 17  ERQRELAQRLSINSISKNLTSREWGSILAAQVVVEKRIEAALVSDGFNAESILAKRHQVR 196
           +R+REL+ RLSIN++ + L      +I+  Q+  E +IE AL SD     SIL KRHQ+R
Sbjct: 156 QRRRELSDRLSINTVKRPLPEDISEAIIETQLQTELKIEEALRSDRVQEGSILEKRHQIR 215

Query: 197 GFLFYPGGTSLTEQTYVNYVKSIDSHGTRACVPYKRVIQAIRQHYLFL 340
           G LFYP G + +  TY++++K I++ GT   + YKR++  I Q  L L
Sbjct: 216 GVLFYPFGRAFSLDTYLDHLKQIENQGTHRSLLYKRLMNEISQEKLEL 263


>gb|AAD27606.1|AF121902_1 unknown [Nicotiana repanda] gi|3138974|gb|AAC16695.1| unknown
           [Nicotiana repanda]
          Length = 274

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 43/108 (39%), Positives = 71/108 (65%)
 Frame = +2

Query: 17  ERQRELAQRLSINSISKNLTSREWGSILAAQVVVEKRIEAALVSDGFNAESILAKRHQVR 196
           +R+REL+ RLS+N+I + L    + +I+  Q+  E +IE AL SD  + +S+L KRHQ+R
Sbjct: 156 QRRRELSDRLSLNTIKRPLPEEIYEAIVETQLQTELKIEEALRSDRVHEDSLLEKRHQIR 215

Query: 197 GFLFYPGGTSLTEQTYVNYVKSIDSHGTRACVPYKRVIQAIRQHYLFL 340
             LFYP G + +  TY++++K I++ GT   + YKR+++ I +  L L
Sbjct: 216 AVLFYPFGRAFSLDTYLDHLKQIENQGTHRSLLYKRLMEEISKDKLEL 263


>ref|YP_002608363.1| PSII 32 kDa protein [Vitis vinifera] gi|209954160|emb|CAQ77603.1|
           PSII 32 kDa protein [Vitis vinifera]
           gi|239764766|gb|ACS15235.1| PSII 32 kDa protein [Vitis
           vinifera]
          Length = 615

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 48/117 (41%), Positives = 70/117 (59%), Gaps = 4/117 (3%)
 Frame = +2

Query: 2   LLPIEERQRELAQRLSINSISKNLTSR--EWGSILAAQVVVEKRIEAALVSDGFNAESIL 175
           L+P + R  EL  RL+I  + +N      ++  IL   V++EK+IEAALV DG++   IL
Sbjct: 498 LMPDDVRFGELRDRLTIYFLGRNELRHLAQFAGILQKAVLLEKKIEAALVFDGYDRNVIL 557

Query: 176 AKRHQVRGFLFY--PGGTSLTEQTYVNYVKSIDSHGTRACVPYKRVIQAIRQHYLFL 340
            +RH +RGFLF        L+E+T   Y+  I  +GTR  VPY RV++AIR  ++ L
Sbjct: 558 LQRHHIRGFLFLHPTRALVLSERTLDRYLNEIQINGTRQSVPYTRVVRAIRNQHIIL 614


>emb|CBJ20753.1| hypothetical protein [Beta vulgaris subsp. maritima]
          Length = 227

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 39/112 (34%), Positives = 66/112 (58%)
 Frame = +2

Query: 2   LLPIEERQRELAQRLSINSISKNLTSREWGSILAAQVVVEKRIEAALVSDGFNAESILAK 181
           L+  E R+ +L  RL+ +S     +      ++  Q  +EK+IEA+L+ DG +     ++
Sbjct: 107 LIHDELRRAQLYNRLAPHSFVNQFSLSTIVDLVYQQAEIEKKIEASLILDGISPTLFFSE 166

Query: 182 RHQVRGFLFYPGGTSLTEQTYVNYVKSIDSHGTRACVPYKRVIQAIRQHYLF 337
            +++RGFLFYP G  ++  T   Y++ I  +GTR  +PY+RV +AIR + LF
Sbjct: 167 LNRLRGFLFYPHGAPISAATLARYIREIAQNGTRQSIPYRRVYRAIRNYELF 218


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