BLASTX nr result

ID: Glycyrrhiza23_contig00005797 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005797
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB40077.1| actin, partial [Glycine max]                           166   1e-39
ref|XP_003553313.1| PREDICTED: actin-like [Glycine max]               166   1e-39
ref|NP_001239953.1| uncharacterized protein LOC100798523 [Glycin...   166   1e-39
gb|AFK40690.1| unknown [Lotus japonicus]                              164   5e-39
gb|AFK39354.1| unknown [Medicago truncatula]                          164   5e-39

>gb|AAB40077.1| actin, partial [Glycine max]
          Length = 336

 Score =  166 bits (421), Expect = 1e-39
 Identities = 91/125 (72%), Positives = 91/125 (72%)
 Frame = -3

Query: 377 SYELPDGQVITIGAERFRCPEVLYQPSMVGMEAVGIHETTYNXXXXXXXXXXXXXXXXXX 198
           SYELPDGQVITIGAERFRCPEVLYQPSMVGMEA GIHE                      
Sbjct: 221 SYELPDGQVITIGAERFRCPEVLYQPSMVGMEASGIHE---------------------- 258

Query: 197 XXXXXXXXIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEISALAPSSM 18
                      TTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEISALAPSSM
Sbjct: 259 -----------TTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEISALAPSSM 307

Query: 17  KIKVV 3
           KIKVV
Sbjct: 308 KIKVV 312


>ref|XP_003553313.1| PREDICTED: actin-like [Glycine max]
          Length = 377

 Score =  166 bits (421), Expect = 1e-39
 Identities = 91/125 (72%), Positives = 91/125 (72%)
 Frame = -3

Query: 377 SYELPDGQVITIGAERFRCPEVLYQPSMVGMEAVGIHETTYNXXXXXXXXXXXXXXXXXX 198
           SYELPDGQVITIGAERFRCPEVLYQPSMVGMEA GIHE                      
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLYQPSMVGMEASGIHE---------------------- 278

Query: 197 XXXXXXXXIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEISALAPSSM 18
                      TTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEISALAPSSM
Sbjct: 279 -----------TTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEISALAPSSM 327

Query: 17  KIKVV 3
           KIKVV
Sbjct: 328 KIKVV 332


>ref|NP_001239953.1| uncharacterized protein LOC100798523 [Glycine max]
           gi|255636850|gb|ACU18758.1| unknown [Glycine max]
          Length = 377

 Score =  166 bits (421), Expect = 1e-39
 Identities = 91/125 (72%), Positives = 91/125 (72%)
 Frame = -3

Query: 377 SYELPDGQVITIGAERFRCPEVLYQPSMVGMEAVGIHETTYNXXXXXXXXXXXXXXXXXX 198
           SYELPDGQVITIGAERFRCPEVLYQPSMVGMEA GIHE                      
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLYQPSMVGMEASGIHE---------------------- 278

Query: 197 XXXXXXXXIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEISALAPSSM 18
                      TTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEISALAPSSM
Sbjct: 279 -----------TTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEISALAPSSM 327

Query: 17  KIKVV 3
           KIKVV
Sbjct: 328 KIKVV 332


>gb|AFK40690.1| unknown [Lotus japonicus]
          Length = 377

 Score =  164 bits (416), Expect = 5e-39
 Identities = 89/125 (71%), Positives = 91/125 (72%)
 Frame = -3

Query: 377 SYELPDGQVITIGAERFRCPEVLYQPSMVGMEAVGIHETTYNXXXXXXXXXXXXXXXXXX 198
           SYELPDGQVITIGAERFRCPEVL+QPS+VGMEA GIHE                      
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSLVGMEAAGIHE---------------------- 278

Query: 197 XXXXXXXXIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEISALAPSSM 18
                      TTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEISALAPSSM
Sbjct: 279 -----------TTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEISALAPSSM 327

Query: 17  KIKVV 3
           KIKVV
Sbjct: 328 KIKVV 332


>gb|AFK39354.1| unknown [Medicago truncatula]
          Length = 377

 Score =  164 bits (416), Expect = 5e-39
 Identities = 89/125 (71%), Positives = 91/125 (72%)
 Frame = -3

Query: 377 SYELPDGQVITIGAERFRCPEVLYQPSMVGMEAVGIHETTYNXXXXXXXXXXXXXXXXXX 198
           SYELPDGQVITIG ERFRCPEVL+QPSM+GMEAVGIHE                      
Sbjct: 241 SYELPDGQVITIGDERFRCPEVLFQPSMIGMEAVGIHE---------------------- 278

Query: 197 XXXXXXXXIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEISALAPSSM 18
                      TTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEISALAPSSM
Sbjct: 279 -----------TTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEISALAPSSM 327

Query: 17  KIKVV 3
           KIKVV
Sbjct: 328 KIKVV 332


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