BLASTX nr result

ID: Glycyrrhiza23_contig00005793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005793
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42347.1| unknown [Medicago truncatula]                          115   5e-24
ref|XP_003625055.1| hypothetical protein MTR_7g090450 [Medicago ...   115   5e-24
ref|XP_003554140.1| PREDICTED: probable calcium-binding protein ...   100   1e-19
ref|XP_003521150.1| PREDICTED: probable calcium-binding protein ...    96   2e-18
ref|XP_002308908.1| predicted protein [Populus trichocarpa] gi|1...    93   3e-17

>gb|AFK42347.1| unknown [Medicago truncatula]
          Length = 216

 Score =  115 bits (287), Expect = 5e-24
 Identities = 56/67 (83%), Positives = 63/67 (94%)
 Frame = -1

Query: 202 SEGSTHKAVTAGSQTPTSVLPDVSGDWSDVTVDVRWELAQAFRLIDRDNDGVVTREELEA 23
           S+ S HK +TAGSQTPTSVLP+VSG+WSD+TVDV+ ELAQAFRLIDRDNDGVV+REELEA
Sbjct: 37  SDESLHKPITAGSQTPTSVLPEVSGEWSDITVDVQCELAQAFRLIDRDNDGVVSREELEA 96

Query: 22  VLTRLGA 2
           VLTRLGA
Sbjct: 97  VLTRLGA 103


>ref|XP_003625055.1| hypothetical protein MTR_7g090450 [Medicago truncatula]
           gi|355500070|gb|AES81273.1| hypothetical protein
           MTR_7g090450 [Medicago truncatula]
           gi|388494876|gb|AFK35504.1| unknown [Medicago
           truncatula]
          Length = 216

 Score =  115 bits (287), Expect = 5e-24
 Identities = 56/67 (83%), Positives = 63/67 (94%)
 Frame = -1

Query: 202 SEGSTHKAVTAGSQTPTSVLPDVSGDWSDVTVDVRWELAQAFRLIDRDNDGVVTREELEA 23
           S+ S HK +TAGSQTPTSVLP+VSG+WSD+TVDV+ ELAQAFRLIDRDNDGVV+REELEA
Sbjct: 37  SDESLHKPITAGSQTPTSVLPEVSGEWSDITVDVQCELAQAFRLIDRDNDGVVSREELEA 96

Query: 22  VLTRLGA 2
           VLTRLGA
Sbjct: 97  VLTRLGA 103


>ref|XP_003554140.1| PREDICTED: probable calcium-binding protein CML36-like [Glycine
           max]
          Length = 218

 Score =  100 bits (249), Expect = 1e-19
 Identities = 50/67 (74%), Positives = 59/67 (88%), Gaps = 1/67 (1%)
 Frame = -1

Query: 199 EGSTHKAVTAGSQTPTSVLPDVSGDWSDVT-VDVRWELAQAFRLIDRDNDGVVTREELEA 23
           + +T+   +AG+QTPTSVLP VSGDWSDV  VDVRW+LAQAFRLIDRDNDGVVTR++LEA
Sbjct: 44  DSTTNHKPSAGNQTPTSVLPGVSGDWSDVAAVDVRWDLAQAFRLIDRDNDGVVTRQDLEA 103

Query: 22  VLTRLGA 2
           +LT LGA
Sbjct: 104 LLTCLGA 110


>ref|XP_003521150.1| PREDICTED: probable calcium-binding protein CML36-like [Glycine
           max]
          Length = 219

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 49/70 (70%), Positives = 59/70 (84%), Gaps = 3/70 (4%)
 Frame = -1

Query: 202 SEGSTHKAVTAGSQTPTSVLPDVSGDWSDVT---VDVRWELAQAFRLIDRDNDGVVTREE 32
           S  + HK  + G+QTPTSVLPDVSG+WS+V    VDVRW+LAQA RLIDRDNDGVVTR++
Sbjct: 45  SSTANHKP-SPGNQTPTSVLPDVSGEWSEVAAAAVDVRWDLAQALRLIDRDNDGVVTRQD 103

Query: 31  LEAVLTRLGA 2
           LE++LTRLGA
Sbjct: 104 LESLLTRLGA 113


>ref|XP_002308908.1| predicted protein [Populus trichocarpa] gi|118488683|gb|ABK96152.1|
           unknown [Populus trichocarpa]
           gi|222854884|gb|EEE92431.1| predicted protein [Populus
           trichocarpa]
          Length = 213

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 43/67 (64%), Positives = 54/67 (80%)
 Frame = -1

Query: 202 SEGSTHKAVTAGSQTPTSVLPDVSGDWSDVTVDVRWELAQAFRLIDRDNDGVVTREELEA 23
           S  ST  A   G +TPTS+LP VSGDW+D++ D+ +EL QAF+LIDRDNDG+V+R ELEA
Sbjct: 43  SSASTSAAAKTGFRTPTSILPQVSGDWTDISADLYFELTQAFKLIDRDNDGLVSRNELEA 102

Query: 22  VLTRLGA 2
           +LTRLGA
Sbjct: 103 LLTRLGA 109


Top