BLASTX nr result

ID: Glycyrrhiza23_contig00005742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005742
         (790 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538371.1| PREDICTED: FACT complex subunit SPT16-like [...    94   4e-17
ref|XP_003553020.1| PREDICTED: FACT complex subunit SPT16-like [...    93   6e-17
ref|XP_003552890.1| PREDICTED: FACT complex subunit SPT16-like [...    89   1e-15
ref|XP_003538372.1| PREDICTED: FACT complex subunit SPT16-like i...    89   1e-15
ref|XP_003618435.1| FACT complex subunit SPT16 [Medicago truncat...    89   1e-15

>ref|XP_003538371.1| PREDICTED: FACT complex subunit SPT16-like [Glycine max]
          Length = 1068

 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 48/53 (90%), Positives = 50/53 (94%), Gaps = 1/53 (1%)
 Frame = +1

Query: 58   TWEELEREASNADREKGNESDSEDDRKRRKAKAFGNSR-ASLSSSMPKRRKLR 213
            TWEELEREASNADREKGNESDSE+DRKRRKAK+FG SR ASLSSSMPKR KLR
Sbjct: 1016 TWEELEREASNADREKGNESDSEEDRKRRKAKSFGKSRGASLSSSMPKRSKLR 1068


>ref|XP_003553020.1| PREDICTED: FACT complex subunit SPT16-like [Glycine max]
          Length = 1068

 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 48/53 (90%), Positives = 49/53 (92%), Gaps = 1/53 (1%)
 Frame = +1

Query: 58   TWEELEREASNADREKGNESDSEDDRKRRKAKAFGNSR-ASLSSSMPKRRKLR 213
            TWEELEREASNADREKGNESDSE+DRKRRKAK FG SR ASLSSSMPKR KLR
Sbjct: 1016 TWEELEREASNADREKGNESDSEEDRKRRKAKGFGKSRGASLSSSMPKRSKLR 1068


>ref|XP_003552890.1| PREDICTED: FACT complex subunit SPT16-like [Glycine max]
          Length = 1064

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 46/53 (86%), Positives = 48/53 (90%), Gaps = 1/53 (1%)
 Frame = +1

Query: 58   TWEELEREASNADREKGNESDSEDDRKRRKAKAFGNSR-ASLSSSMPKRRKLR 213
            TWEELEREASNADREKGNESDSE+DRKRRKAK+FG SR A LSSSM KR KLR
Sbjct: 1012 TWEELEREASNADREKGNESDSEEDRKRRKAKSFGKSRGAGLSSSMTKRPKLR 1064


>ref|XP_003538372.1| PREDICTED: FACT complex subunit SPT16-like isoform 1 [Glycine max]
            gi|356539783|ref|XP_003538373.1| PREDICTED: FACT complex
            subunit SPT16-like isoform 2 [Glycine max]
          Length = 1069

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 46/53 (86%), Positives = 48/53 (90%), Gaps = 1/53 (1%)
 Frame = +1

Query: 58   TWEELEREASNADREKGNESDSEDDRKRRKAKAFGNSR-ASLSSSMPKRRKLR 213
            TWEELEREASNADREKGNESDSE+DRKRRKAK+FG SR A LSSSM KR KLR
Sbjct: 1017 TWEELEREASNADREKGNESDSEEDRKRRKAKSFGKSRGAGLSSSMTKRPKLR 1069


>ref|XP_003618435.1| FACT complex subunit SPT16 [Medicago truncatula]
            gi|355493450|gb|AES74653.1| FACT complex subunit SPT16
            [Medicago truncatula]
          Length = 1058

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 45/53 (84%), Positives = 48/53 (90%), Gaps = 1/53 (1%)
 Frame = +1

Query: 58   TWEELEREASNADREKGNESDSEDDRKRRKAK-AFGNSRASLSSSMPKRRKLR 213
            TWEELER+ASNADREKGNESDSE+DRKRRKAK AFG  R +LSSSMPKR KLR
Sbjct: 1006 TWEELERDASNADREKGNESDSEEDRKRRKAKAAFGKPRGNLSSSMPKRPKLR 1058


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