BLASTX nr result
ID: Glycyrrhiza23_contig00005701
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00005701
(2443 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003539383.1| PREDICTED: pentatricopeptide repeat-containi... 817 0.0
ref|XP_003548343.1| PREDICTED: pentatricopeptide repeat-containi... 800 0.0
ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containi... 791 0.0
gb|AAS80150.1| ACT11D09.4 [Cucumis melo] 788 0.0
ref|XP_003630728.1| Pentatricopeptide repeat-containing protein ... 785 0.0
>ref|XP_003539383.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10270-like
[Glycine max]
Length = 782
Score = 817 bits (2110), Expect = 0.0
Identities = 397/467 (85%), Positives = 435/467 (93%)
Frame = +3
Query: 3 DSTSALVGPRLSLHNRVQSLIRAGDLDAASAVARHSVFSVTRPTVFTCNAIIAAMYRAQR 182
DSTSALVGPRLSLHNRVQSLIRAGDL+AASA+ARHSVFSVTRPTVFTCNAIIAAMYR+ R
Sbjct: 73 DSTSALVGPRLSLHNRVQSLIRAGDLEAASAIARHSVFSVTRPTVFTCNAIIAAMYRSGR 132
Query: 183 YSEAIALFHFFFNQSNLVPNIVSYNNVINTHCDEGRVDVALEVYRHVMASAPFSPSPVTY 362
Y EAIALFHFFF QSN+VPNIVSYNNVINTHCD+GRVDVALEVYRHV+A+APFSPSPVTY
Sbjct: 133 YEEAIALFHFFFKQSNIVPNIVSYNNVINTHCDQGRVDVALEVYRHVVANAPFSPSPVTY 192
Query: 363 RHLTKGLIAAGRIDEAVDLLREMLSKGHGADSLVYNNLISGFLELGNLERANELFDELKE 542
RHLTKGLI + RI EA+DLLREMLSKGHGADSLVYNNLISGFL L N ++A ELFDELKE
Sbjct: 193 RHLTKGLIHSERISEALDLLREMLSKGHGADSLVYNNLISGFLHLDNFDKAIELFDELKE 252
Query: 543 RCLVYDGVVNATYMEWFFRQGRDREAMDSYRSLMDRQFRMTPATCNVLLEVLLRHGKDSQ 722
RCLVYDGVVNAT+MEWFF +GRD++AMDSYRSL+DRQFRMTPATCNVLLE LL H K S+
Sbjct: 253 RCLVYDGVVNATFMEWFFSKGRDKDAMDSYRSLLDRQFRMTPATCNVLLEALLNHSKTSE 312
Query: 723 AWSLFEQMLDNHTPPNFQAVNSDTFNIMVNECFSLGRFAEALATFKRVGTKPNSKPFAMD 902
AWSLF+ MLDNHTPPNFQAVNSD+FNIMVN CF LG F AL+TFK+VG+KPNSKPFAMD
Sbjct: 313 AWSLFDNMLDNHTPPNFQAVNSDSFNIMVNHCFKLGNFELALSTFKKVGSKPNSKPFAMD 372
Query: 903 VGGYNNIIARFCENGMLSEAETLFEELCSKSLSPDVPTHRTLIDAYLKLERIDDALRVFN 1082
V GYNNIIARFCEN MLS+AETLFEELCSKSLSPDVPTHRTLI+ YL+++RIDDALR+F+
Sbjct: 373 VAGYNNIIARFCENAMLSQAETLFEELCSKSLSPDVPTHRTLIEVYLRMDRIDDALRIFH 432
Query: 1083 RMVDAGLRVVAGFGNRVFDELIKNGRAVDCAQILSKMGEKDPKPDPTCYEVVIRGLCAQG 1262
RMVD+GLRVVA FGN VF ELIKNG+A+DCAQILSKMGEKDPKPDPTCYEVVI+GLCA G
Sbjct: 433 RMVDSGLRVVATFGNTVFHELIKNGKAIDCAQILSKMGEKDPKPDPTCYEVVIKGLCADG 492
Query: 1263 LLDRSRDLLDEVMRYGVGVTSALRELATEAFKNAGRGEEIERLLDVN 1403
LLD+SR+LLDEVMRYGVGVTS+LRE TE FK AGRG+EIERLLD+N
Sbjct: 493 LLDKSRELLDEVMRYGVGVTSSLREFVTEVFKKAGRGDEIERLLDMN 539
Score = 116 bits (291), Expect = 2e-23
Identities = 68/155 (43%), Positives = 77/155 (49%), Gaps = 26/155 (16%)
Frame = +2
Query: 1721 PPMAGPHNHMPAAAGTTGQPYHHPQSELPPHMKRVAPQMTSNHYT---PSPPMAGHXXXX 1891
PPM GPH P ++ TGQPYH SE PH+ RVAPQMT+ HYT PSP MAGH
Sbjct: 632 PPMTGPH---PGSSPNTGQPYHPNASEHHPHVSRVAPQMTAQHYTPSGPSPQMAGHQPYG 688
Query: 1892 XXXXXXXXXXXXXXXXXXXXXXXAE-----------------------TSMPPYYTAPGP 2002
+ PPY+ + GP
Sbjct: 689 TPRGPQQWAERQYPPSGLSPPMAGQHHPLAGPTPPMSGWSIPSNGASAKMSPPYHISAGP 748
Query: 2003 SPQMTGPYHPSSGTPPRHFEESHQEQSEAPEQVAA 2107
S Q+TGPYHPSS TPP HFEESHQ+QSE PEQVAA
Sbjct: 749 SSQVTGPYHPSSSTPP-HFEESHQQQSEVPEQVAA 782
>ref|XP_003548343.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10270-like
[Glycine max]
Length = 861
Score = 800 bits (2066), Expect = 0.0
Identities = 392/467 (83%), Positives = 425/467 (91%)
Frame = +3
Query: 3 DSTSALVGPRLSLHNRVQSLIRAGDLDAASAVARHSVFSVTRPTVFTCNAIIAAMYRAQR 182
DSTSALVGPRLSLHNRVQSLIRAGDLDAASA+ARHSVFS TRPTVFTCNAIIAAMYR+ R
Sbjct: 73 DSTSALVGPRLSLHNRVQSLIRAGDLDAASAIARHSVFSATRPTVFTCNAIIAAMYRSGR 132
Query: 183 YSEAIALFHFFFNQSNLVPNIVSYNNVINTHCDEGRVDVALEVYRHVMASAPFSPSPVTY 362
Y EAI LF FFF QSN+VPNIVSYNNVINTHCDEGRVDVALEVYRHV+A+APFSPSPVTY
Sbjct: 133 YEEAIGLFQFFFKQSNIVPNIVSYNNVINTHCDEGRVDVALEVYRHVLANAPFSPSPVTY 192
Query: 363 RHLTKGLIAAGRIDEAVDLLREMLSKGHGADSLVYNNLISGFLELGNLERANELFDELKE 542
RHLTKGLI + RI EA+DLLREML+KGHGADSLVYNNLISGFL L N ++A ELF+ELKE
Sbjct: 193 RHLTKGLIQSSRISEALDLLREMLTKGHGADSLVYNNLISGFLHLDNFDKAIELFEELKE 252
Query: 543 RCLVYDGVVNATYMEWFFRQGRDREAMDSYRSLMDRQFRMTPATCNVLLEVLLRHGKDSQ 722
RCLVYDGVVNAT+MEWFF +GRD+EAMDSYRSL+DRQFRMTPATCNVLLEVLL+H K ++
Sbjct: 253 RCLVYDGVVNATFMEWFFGKGRDKEAMDSYRSLLDRQFRMTPATCNVLLEVLLKHSKSNE 312
Query: 723 AWSLFEQMLDNHTPPNFQAVNSDTFNIMVNECFSLGRFAEALATFKRVGTKPNSKPFAMD 902
AWSLF MLDNHTPPNFQAVNSDTFNIMVN CF LG F +ALATFK+ GTKPNSKPFAMD
Sbjct: 313 AWSLFHLMLDNHTPPNFQAVNSDTFNIMVNHCFKLGNFEDALATFKKFGTKPNSKPFAMD 372
Query: 903 VGGYNNIIARFCENGMLSEAETLFEELCSKSLSPDVPTHRTLIDAYLKLERIDDALRVFN 1082
V GYNNIIARF ENGMLS AETLFEELCSKSLSPDVPTHRTLI+AYL++ RIDDALR+FN
Sbjct: 373 VAGYNNIIARFSENGMLSHAETLFEELCSKSLSPDVPTHRTLIEAYLRMNRIDDALRIFN 432
Query: 1083 RMVDAGLRVVAGFGNRVFDELIKNGRAVDCAQILSKMGEKDPKPDPTCYEVVIRGLCAQG 1262
RMVD GLRVVA FG LIKNG+A+DCAQILSKMGEKDPKPDPTCYEVVI+GLCA G
Sbjct: 433 RMVDTGLRVVATFGRERDARLIKNGKALDCAQILSKMGEKDPKPDPTCYEVVIKGLCADG 492
Query: 1263 LLDRSRDLLDEVMRYGVGVTSALRELATEAFKNAGRGEEIERLLDVN 1403
LLD+S +LLDEVMRYGVG+TS+LRE TE FK AGR +EIERLLD+N
Sbjct: 493 LLDKSLELLDEVMRYGVGLTSSLREFVTEVFKKAGRSDEIERLLDMN 539
Score = 110 bits (276), Expect = 1e-21
Identities = 66/144 (45%), Positives = 73/144 (50%), Gaps = 15/144 (10%)
Frame = +2
Query: 1721 PPMAGPHNHMPAAAGTTGQPYHHPQSELPPHMKRVAPQMTSNHYTP---SPPMAGHXXXX 1891
PPM GPH ++ TGQ YH SE PPHM RVAPQMT HYTP SP MAGH
Sbjct: 720 PPMTGPHPG--SSPHMTGQSYHPNTSEHPPHMSRVAPQMTEQHYTPSGSSPQMAGHGHQP 777
Query: 1892 XXXXXXXXXXXXXXXXXXXXXXXAETS-----------MPPYYTAPGPSPQMTGPYHP-S 2035
S PPY+ + PS Q+TGPYHP S
Sbjct: 778 YGTPHGPQQMEERWYPSSGLSPPMSGSSIPWNGASAKMSPPYHRSAAPSSQVTGPYHPSS 837
Query: 2036 SGTPPRHFEESHQEQSEAPEQVAA 2107
S + P HFEESHQ+QSE PEQVAA
Sbjct: 838 SSSSPPHFEESHQQQSEVPEQVAA 861
>ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10270-like
[Cucumis sativus]
Length = 871
Score = 791 bits (2042), Expect = 0.0
Identities = 378/467 (80%), Positives = 431/467 (92%)
Frame = +3
Query: 3 DSTSALVGPRLSLHNRVQSLIRAGDLDAASAVARHSVFSVTRPTVFTCNAIIAAMYRAQR 182
DSTSALVGPRL+LHNRVQSLIRAGDLDAAS+VARHSVFS TRPTVFTCNAIIAAMYRA+R
Sbjct: 73 DSTSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSVFSNTRPTVFTCNAIIAAMYRAKR 132
Query: 183 YSEAIALFHFFFNQSNLVPNIVSYNNVINTHCDEGRVDVALEVYRHVMASAPFSPSPVTY 362
YS+AIALF FFFNQSN+VPN+VSYNN+IN HCDEGRVDV LEVYRH++A+APFSPS VTY
Sbjct: 133 YSDAIALFQFFFNQSNIVPNVVSYNNLINAHCDEGRVDVGLEVYRHIIANAPFSPSAVTY 192
Query: 363 RHLTKGLIAAGRIDEAVDLLREMLSKGHGADSLVYNNLISGFLELGNLERANELFDELKE 542
RHLTKGLI AGRI+EAVDLLREML+KGHGADSLV+NNLISGFL LGNLE+ANELFDELKE
Sbjct: 193 RHLTKGLIDAGRIEEAVDLLREMLNKGHGADSLVFNNLISGFLNLGNLEKANELFDELKE 252
Query: 543 RCLVYDGVVNATYMEWFFRQGRDREAMDSYRSLMDRQFRMTPATCNVLLEVLLRHGKDSQ 722
RCLVYDGVVNAT+M+WFF QG+++EAM+SY+SL+DRQF+M PATCNVLLEVLL+H K ++
Sbjct: 253 RCLVYDGVVNATFMDWFFNQGKEKEAMESYKSLLDRQFKMVPATCNVLLEVLLKHEKKTE 312
Query: 723 AWSLFEQMLDNHTPPNFQAVNSDTFNIMVNECFSLGRFAEALATFKRVGTKPNSKPFAMD 902
AW+LF+QMLDNHTPPNFQAVNSDTFNIMVNECF G+FAEA+ TF++VGT+P S+PFAMD
Sbjct: 313 AWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKHGKFAEAVETFRKVGTQPKSRPFAMD 372
Query: 903 VGGYNNIIARFCENGMLSEAETLFEELCSKSLSPDVPTHRTLIDAYLKLERIDDALRVFN 1082
V GYNNIIARFCE GM+++AET F ELCSKSLSPDVPTHRTLI++YLK+E+IDDALRVFN
Sbjct: 373 VAGYNNIIARFCEQGMMADAETFFAELCSKSLSPDVPTHRTLIESYLKIEQIDDALRVFN 432
Query: 1083 RMVDAGLRVVAGFGNRVFDELIKNGRAVDCAQILSKMGEKDPKPDPTCYEVVIRGLCAQG 1262
RMVD GLRVVA FGN VF ELIKNG+A DCAQIL+KMGE+DPKPDPTCY+VVIRGLC +G
Sbjct: 433 RMVDVGLRVVASFGNMVFGELIKNGKAADCAQILTKMGERDPKPDPTCYDVVIRGLCNEG 492
Query: 1263 LLDRSRDLLDEVMRYGVGVTSALRELATEAFKNAGRGEEIERLLDVN 1403
LD SR+LLD++MRYG+G+T L E EAF AGR EEIERLL++N
Sbjct: 493 ALDASRELLDQIMRYGIGLTPTLEEFVKEAFVKAGRHEEIERLLNMN 539
>gb|AAS80150.1| ACT11D09.4 [Cucumis melo]
Length = 896
Score = 788 bits (2035), Expect = 0.0
Identities = 376/467 (80%), Positives = 430/467 (92%)
Frame = +3
Query: 3 DSTSALVGPRLSLHNRVQSLIRAGDLDAASAVARHSVFSVTRPTVFTCNAIIAAMYRAQR 182
DSTSALVGPRL+LHNRVQSLIRAGDLDAAS+VARHSVFS TRPTVFTCNAIIAAMYRA+R
Sbjct: 99 DSTSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSVFSNTRPTVFTCNAIIAAMYRAKR 158
Query: 183 YSEAIALFHFFFNQSNLVPNIVSYNNVINTHCDEGRVDVALEVYRHVMASAPFSPSPVTY 362
YS+AIALF FFFNQSN+VPN+VSYNN+IN HCDEGRVDV LEVYRH++A+APFSPS VTY
Sbjct: 159 YSDAIALFQFFFNQSNIVPNVVSYNNLINAHCDEGRVDVGLEVYRHIIANAPFSPSAVTY 218
Query: 363 RHLTKGLIAAGRIDEAVDLLREMLSKGHGADSLVYNNLISGFLELGNLERANELFDELKE 542
RHLTKGLI AGRI+EAVDLLREML+KGHGADSLV+NNLISGFL LGNL +ANELFDELKE
Sbjct: 219 RHLTKGLIDAGRIEEAVDLLREMLNKGHGADSLVFNNLISGFLNLGNLVKANELFDELKE 278
Query: 543 RCLVYDGVVNATYMEWFFRQGRDREAMDSYRSLMDRQFRMTPATCNVLLEVLLRHGKDSQ 722
RCLVYDGVVNAT+M+WFF QG+++EAM+SY+SL+DRQF+M PATCNVLLEVLL+H K ++
Sbjct: 279 RCLVYDGVVNATFMDWFFNQGKEKEAMESYKSLLDRQFKMVPATCNVLLEVLLKHEKKTE 338
Query: 723 AWSLFEQMLDNHTPPNFQAVNSDTFNIMVNECFSLGRFAEALATFKRVGTKPNSKPFAMD 902
AW+LF+QMLDNHTPPNFQAVNSDTFNIMVNECF LG+F EA+ TF++VGT+P S+PFAMD
Sbjct: 339 AWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKLGKFTEAVETFRKVGTQPKSRPFAMD 398
Query: 903 VGGYNNIIARFCENGMLSEAETLFEELCSKSLSPDVPTHRTLIDAYLKLERIDDALRVFN 1082
V GYNNIIARFCE GM+++AET F ELCSKSLSPDVPTHRTLI++YLK+E+IDDALRVFN
Sbjct: 399 VAGYNNIIARFCEQGMMADAETFFAELCSKSLSPDVPTHRTLIESYLKIEQIDDALRVFN 458
Query: 1083 RMVDAGLRVVAGFGNRVFDELIKNGRAVDCAQILSKMGEKDPKPDPTCYEVVIRGLCAQG 1262
RMVD GLRVVA FGN VF ELIKNG+A DCAQIL+KMGE+DPKPDPTCY+VVIRGLC +G
Sbjct: 459 RMVDVGLRVVASFGNMVFGELIKNGKAADCAQILTKMGERDPKPDPTCYDVVIRGLCNEG 518
Query: 1263 LLDRSRDLLDEVMRYGVGVTSALRELATEAFKNAGRGEEIERLLDVN 1403
LD SR+LLD++MRYG+G+T L E +AF AGR EEIERLL++N
Sbjct: 519 ALDTSRELLDQIMRYGIGLTPTLEEFVKDAFVKAGRHEEIERLLNMN 565
>ref|XP_003630728.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524750|gb|AET05204.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 918
Score = 785 bits (2028), Expect = 0.0
Identities = 383/467 (82%), Positives = 421/467 (90%)
Frame = +3
Query: 3 DSTSALVGPRLSLHNRVQSLIRAGDLDAASAVARHSVFSVTRPTVFTCNAIIAAMYRAQR 182
DSTS+LVGPRLSLHNRVQSLIRA DLDAASA ARHSVFS TRPTVFTCNAIIAAMYRA+R
Sbjct: 73 DSTSSLVGPRLSLHNRVQSLIRADDLDAASAAARHSVFSSTRPTVFTCNAIIAAMYRAKR 132
Query: 183 YSEAIALFHFFFNQSNLVPNIVSYNNVINTHCDEGRVDVALEVYRHVMASAPFSPSPVTY 362
YS+AIALFHFFFNQSNLVPNIVSYNNVINTHCDEGRVDVALEVYRH++ APF PS VTY
Sbjct: 133 YSDAIALFHFFFNQSNLVPNIVSYNNVINTHCDEGRVDVALEVYRHIIEHAPFGPSSVTY 192
Query: 363 RHLTKGLIAAGRIDEAVDLLREMLSKGHGADSLVYNNLISGFLELGNLERANELFDELKE 542
RHLTKGLI+ GRIDEA DLL EML+K HGADS+VYNNLISGFLELGNL++ANELFDELK
Sbjct: 193 RHLTKGLISVGRIDEANDLLVEMLAKNHGADSMVYNNLISGFLELGNLDKANELFDELKG 252
Query: 543 RCLVYDGVVNATYMEWFFRQGRDREAMDSYRSLMDRQFRMTPATCNVLLEVLLRHGKDSQ 722
RC VYDGVVNATYMEWFF+QGRD+EAMDSY+S MDR+FRMTPATCNVLLEVLL+H K +
Sbjct: 253 RCSVYDGVVNATYMEWFFKQGRDKEAMDSYKSFMDREFRMTPATCNVLLEVLLKHDKKKE 312
Query: 723 AWSLFEQMLDNHTPPNFQAVNSDTFNIMVNECFSLGRFAEALATFKRVGTKPNSKPFAMD 902
AW LF+QMLDNHTPPNFQAVNSDTFNIMVNECF G+F EAL TF++VGTK NSKPF MD
Sbjct: 313 AWKLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKHGKFDEALDTFRKVGTKINSKPFIMD 372
Query: 903 VGGYNNIIARFCENGMLSEAETLFEELCSKSLSPDVPTHRTLIDAYLKLERIDDALRVFN 1082
V GY NI++RFCE GM+SEA+TLF+E SK LS DVPTH +ID YLK+ IDDALRVFN
Sbjct: 373 VAGYRNIVSRFCEIGMMSEADTLFQESLSKHLSADVPTHTAMIDGYLKVGNIDDALRVFN 432
Query: 1083 RMVDAGLRVVAGFGNRVFDELIKNGRAVDCAQILSKMGEKDPKPDPTCYEVVIRGLCAQG 1262
+MVD GLRV A FGNRVFDELIKNG+ ++CAQILSKMG +DPKPDPTCYEVVI+GLCA+G
Sbjct: 433 KMVDRGLRVTATFGNRVFDELIKNGKVIECAQILSKMGGQDPKPDPTCYEVVIKGLCAEG 492
Query: 1263 LLDRSRDLLDEVMRYGVGVTSALRELATEAFKNAGRGEEIERLLDVN 1403
LLD+SR+LLDEVMRYGVGVT ALRE T+ FKNAG+GEEIERLLD N
Sbjct: 493 LLDKSRELLDEVMRYGVGVTPALRESVTKVFKNAGKGEEIERLLDTN 539
Score = 85.1 bits (209), Expect = 8e-14
Identities = 56/145 (38%), Positives = 70/145 (48%), Gaps = 17/145 (11%)
Frame = +2
Query: 1721 PPMAGPHNHMPAAAGTTGQPYHHPQSELPPHMKRVAPQMTSNHYTP---SPPMAGHXXXX 1891
PPM + TGQP HHPQ + P M+R +PQ T+ YTP SP + G+
Sbjct: 775 PPMNRSQMPTTGPSHLTGQP-HHPQYQHTPRMQRASPQSTAKPYTPYGPSPQIDGYQPFG 833
Query: 1892 XXXXXXXXXXXXXXXXXXXXXXX-------------AETSMPPYYTA-PGPSPQMTGPYH 2029
+E S+P + ++ PG S Q+TGPYH
Sbjct: 834 QQSGPQQTAEKPYQPSKLTTPMSGQHHPMSGPYPPMSEPSLPSHGSSGPGTSSQITGPYH 893
Query: 2030 PSSGTPPRHFEESHQEQSEAPEQVA 2104
PSSGTPP HFEESHQ+Q E PEQVA
Sbjct: 894 PSSGTPP-HFEESHQQQLEVPEQVA 917