BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005688
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522765.1| PREDICTED: DNA-directed RNA polymerases I, I...   151   9e-35
ref|XP_003517695.1| PREDICTED: DNA-directed RNA polymerases I, I...   148   8e-34
ref|XP_003526546.1| PREDICTED: DNA-directed RNA polymerases I, I...   147   1e-33
ref|NP_176363.1| DNA-directed RNA polymerases II subunit L [Arab...   147   2e-33
gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK221...   145   5e-33

>ref|XP_003522765.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC5-like [Glycine max]
          Length = 71

 Score =  151 bits (382), Expect = 9e-35
 Identities = 70/71 (98%), Positives = 71/71 (100%)
 Frame = -1

Query: 599 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 420
           MIIPVRCFTCGKVIGNKWDTYLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1   MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 419 NYNTLDKSDPN 387
           NYNTLDKSDPN
Sbjct: 61  NYNTLDKSDPN 71


>ref|XP_003517695.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC5 [Glycine max] gi|356502404|ref|XP_003520009.1|
           PREDICTED: DNA-directed RNA polymerases I, II, and III
           subunit RPABC5-like [Glycine max]
           gi|255631340|gb|ACU16037.1| unknown [Glycine max]
          Length = 71

 Score =  148 bits (374), Expect = 8e-34
 Identities = 68/71 (95%), Positives = 71/71 (100%)
 Frame = -1

Query: 599 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 420
           MIIPVRCFTCGKVIGNKWDTYLDLLQ+DY+EGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1   MIIPVRCFTCGKVIGNKWDTYLDLLQSDYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 419 NYNTLDKSDPN 387
           NYNTLDKSDP+
Sbjct: 61  NYNTLDKSDPS 71


>ref|XP_003526546.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC5-like [Glycine max]
          Length = 71

 Score =  147 bits (372), Expect = 1e-33
 Identities = 69/71 (97%), Positives = 70/71 (98%)
 Frame = -1

Query: 599 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 420
           MIIPVRCFTCGKVIGNKWDTYLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1   MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 419 NYNTLDKSDPN 387
           NYNTLDKSD N
Sbjct: 61  NYNTLDKSDLN 71


>ref|NP_176363.1| DNA-directed RNA polymerases II subunit L [Arabidopsis thaliana]
           gi|297840381|ref|XP_002888072.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|11134747|sp|Q9SYA6.1|RPAB5_ARATH RecName:
           Full=DNA-directed RNA polymerases I, II, and III subunit
           RPABC5; Short=RNA polymerases I, II, and III subunit
           ABC5; AltName: Full=ABC10; AltName: Full=DNA-directed
           RNA polymerase III subunit L; AltName: Full=RPB10
           homolog gi|4508082|gb|AAD21426.1| Putative RNA
           polymerase II subunit Rpb10 [Arabidopsis thaliana]
           gi|297333913|gb|EFH64331.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|332195756|gb|AEE33877.1| DNA-directed RNA polymerases
           II subunit L [Arabidopsis thaliana]
          Length = 71

 Score =  147 bits (370), Expect = 2e-33
 Identities = 66/71 (92%), Positives = 70/71 (98%)
 Frame = -1

Query: 599 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 420
           MI+PVRCFTCGKVIGNKWDTYL+LLQADY EGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1   MIVPVRCFTCGKVIGNKWDTYLELLQADYAEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 419 NYNTLDKSDPN 387
           NYNT++KSDPN
Sbjct: 61  NYNTMEKSDPN 71


>gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK22149.1| unknown
           [Picea sitchensis] gi|116789545|gb|ABK25286.1| unknown
           [Picea sitchensis]
          Length = 71

 Score =  145 bits (367), Expect = 5e-33
 Identities = 67/71 (94%), Positives = 70/71 (98%)
 Frame = -1

Query: 599 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 420
           MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1   MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 419 NYNTLDKSDPN 387
           NYNTL++S+ N
Sbjct: 61  NYNTLERSETN 71