BLASTX nr result

ID: Glycyrrhiza23_contig00005684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005684
         (703 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235710.1| uncharacterized protein LOC100500277 [Glycin...   164   2e-38
ref|XP_002280869.1| PREDICTED: dynein light chain 1, cytoplasmic...   156   3e-36
ref|XP_002303289.1| predicted protein [Populus trichocarpa] gi|2...   155   6e-36
ref|XP_003546944.1| PREDICTED: rho guanine nucleotide exchange f...   153   3e-35
ref|XP_003620614.1| Dynein light chain [Medicago truncatula] gi|...   153   3e-35

>ref|NP_001235710.1| uncharacterized protein LOC100500277 [Glycine max]
           gi|255629903|gb|ACU15302.1| unknown [Glycine max]
          Length = 93

 Score =  164 bits (414), Expect = 2e-38
 Identities = 79/93 (84%), Positives = 85/93 (91%)
 Frame = +2

Query: 113 MLEGKAMVKETDMPLKMQIQATASASQALDLFDVSDCISIAAHIKKEFDTVYGSGWQCVV 292
           MLEGKAMVKETDM  KMQI A ASASQALDL+DV DCISIAAHIKKEFD+VYG+GWQCVV
Sbjct: 1   MLEGKAMVKETDMSTKMQIHAMASASQALDLYDVYDCISIAAHIKKEFDSVYGNGWQCVV 60

Query: 293 GSNFGCYFSHSPGTFIYFALETLYFLIYKGTTS 391
           GSNFGCYF+HS GTFIYFAL TL FLI+KGT+S
Sbjct: 61  GSNFGCYFTHSSGTFIYFALATLNFLIFKGTSS 93


>ref|XP_002280869.1| PREDICTED: dynein light chain 1, cytoplasmic [Vitis vinifera]
           gi|297738812|emb|CBI28057.3| unnamed protein product
           [Vitis vinifera]
          Length = 96

 Score =  156 bits (395), Expect = 3e-36
 Identities = 71/94 (75%), Positives = 86/94 (91%)
 Frame = +2

Query: 113 MLEGKAMVKETDMPLKMQIQATASASQALDLFDVSDCISIAAHIKKEFDTVYGSGWQCVV 292
           MLEGKA++KE+DMP+KMQ QA ASASQALD++DVSDC+SIAAHIKKEFD ++G GWQCVV
Sbjct: 1   MLEGKAVIKESDMPVKMQKQAMASASQALDIYDVSDCVSIAAHIKKEFDGLFGCGWQCVV 60

Query: 293 GSNFGCYFSHSPGTFIYFALETLYFLIYKGTTSS 394
           GSNFGC+F+HS GTFIYFA+ETL FL++K  +SS
Sbjct: 61  GSNFGCFFTHSQGTFIYFAMETLNFLVFKAPSSS 94


>ref|XP_002303289.1| predicted protein [Populus trichocarpa] gi|222840721|gb|EEE78268.1|
           predicted protein [Populus trichocarpa]
          Length = 94

 Score =  155 bits (393), Expect = 6e-36
 Identities = 72/93 (77%), Positives = 83/93 (89%)
 Frame = +2

Query: 113 MLEGKAMVKETDMPLKMQIQATASASQALDLFDVSDCISIAAHIKKEFDTVYGSGWQCVV 292
           MLEGKA++++TDMPLKMQIQA ASASQALDL+DV DC S+A+HIKKEFD  YG GWQCVV
Sbjct: 1   MLEGKALIEDTDMPLKMQIQAMASASQALDLYDVLDCKSVASHIKKEFDLRYGGGWQCVV 60

Query: 293 GSNFGCYFSHSPGTFIYFALETLYFLIYKGTTS 391
           GSNFGC+F+HS GTFIYF LETL FLI+KG +S
Sbjct: 61  GSNFGCFFTHSKGTFIYFTLETLNFLIFKGASS 93


>ref|XP_003546944.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Glycine
           max]
          Length = 743

 Score =  153 bits (387), Expect = 3e-35
 Identities = 71/90 (78%), Positives = 82/90 (91%)
 Frame = +2

Query: 113 MLEGKAMVKETDMPLKMQIQATASASQALDLFDVSDCISIAAHIKKEFDTVYGSGWQCVV 292
           MLEGKA++++TDMP KMQIQA ASAS+ALDL+DV DC SIAAHIKKEFDT YGSGWQCVV
Sbjct: 1   MLEGKAVIEDTDMPDKMQIQAMASASEALDLYDVFDCTSIAAHIKKEFDTKYGSGWQCVV 60

Query: 293 GSNFGCYFSHSPGTFIYFALETLYFLIYKG 382
           GS+FGC+F+HS GTF+YF LETL FLI+KG
Sbjct: 61  GSSFGCFFTHSKGTFVYFTLETLNFLIFKG 90


>ref|XP_003620614.1| Dynein light chain [Medicago truncatula]
           gi|355495629|gb|AES76832.1| Dynein light chain [Medicago
           truncatula]
          Length = 93

 Score =  153 bits (387), Expect = 3e-35
 Identities = 73/93 (78%), Positives = 82/93 (88%)
 Frame = +2

Query: 113 MLEGKAMVKETDMPLKMQIQATASASQALDLFDVSDCISIAAHIKKEFDTVYGSGWQCVV 292
           MLEGK +V+ETDMPLKMQIQA + ASQALDL+DV DC SIA +IKKEFD  YGS WQCVV
Sbjct: 1   MLEGKGVVEETDMPLKMQIQAMSYASQALDLYDVCDCRSIAGYIKKEFDKNYGSRWQCVV 60

Query: 293 GSNFGCYFSHSPGTFIYFALETLYFLIYKGTTS 391
           GSNFGC+FSH+PGTFIYF+LETL FLIYKG +S
Sbjct: 61  GSNFGCFFSHTPGTFIYFSLETLKFLIYKGASS 93


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