BLASTX nr result

ID: Glycyrrhiza23_contig00005672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005672
         (844 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137193.1| PREDICTED: 50S ribosomal protein L23-like [C...   232   7e-59
emb|CAN63891.1| hypothetical protein VITISV_012657 [Vitis vinifera]   229   8e-58
ref|XP_002270942.2| PREDICTED: uncharacterized protein LOC100245...   226   5e-57
ref|XP_003552058.1| PREDICTED: uncharacterized protein LOC100800...   225   1e-56
gb|ABB17000.1| ribosomal protein L23 family protein [Solanum tub...   220   3e-55

>ref|XP_004137193.1| PREDICTED: 50S ribosomal protein L23-like [Cucumis sativus]
           gi|449483270|ref|XP_004156540.1| PREDICTED: 50S
           ribosomal protein L23-like isoform 1 [Cucumis sativus]
           gi|449483272|ref|XP_004156541.1| PREDICTED: 50S
           ribosomal protein L23-like isoform 2 [Cucumis sativus]
          Length = 174

 Score =  232 bits (592), Expect = 7e-59
 Identities = 122/176 (69%), Positives = 137/176 (77%), Gaps = 3/176 (1%)
 Frame = -1

Query: 721 MGSRLGRRVVHFANLPIKLLMPNSFTNIQEIALKTIPSATKIEIKRVLESLYGFEVEKVR 542
           MGSRLGRRVVHFANLPIKLLMP SFTNI EIALKTIPSA+KIEIKRVLESLYGFEV+KV+
Sbjct: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVQ 60

Query: 541 TLNMEGKKKKRGGVLFAKPDYKKAYVTLRNPLSIDPNLYPIRIVEEDKRNLNKQSKSSVV 362
           TLNMEGKKKKRGG+L AKPDYKKAYVTLRNPLSI P++YPIRI+EEDKRN+NKQSKSS+V
Sbjct: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISPDMYPIRIIEEDKRNMNKQSKSSIV 120

Query: 361 EDEAQNNRTHWLDDNRE---KTQRSKSQNGYNXXXXXXXXXXXXXAKFPWTSMRPG 203
           E+     + HWL +      KT +  +  G                KFPW+SMR G
Sbjct: 121 EE--GEAKKHWLHEKEPVGIKTYKGFADRG-RRRSGGGAETVEPSTKFPWSSMRSG 173


>emb|CAN63891.1| hypothetical protein VITISV_012657 [Vitis vinifera]
          Length = 480

 Score =  229 bits (583), Expect = 8e-58
 Identities = 121/190 (63%), Positives = 149/190 (78%), Gaps = 4/190 (2%)
 Frame = -1

Query: 766 VVCE-REIEKC*ENRIMGSRLGRRVVHFANLPIKLLMPNSFTNIQEIALKTIPSATKIEI 590
           V C+ R+ +K  E   MGSRLGRRV++F NLPIKLLMP+SFTNI+EIALKT+PSA+KIEI
Sbjct: 294 VSCDLRDSQKQNEGSKMGSRLGRRVINFTNLPIKLLMPSSFTNIKEIALKTVPSASKIEI 353

Query: 589 KRVLESLYGFEVEKVRTLNMEGKKKKRGGVLFAKPDYKKAYVTLRNPLSIDPNLYPIRIV 410
           KRVLESLYGFEVEKVRTLNMEGKKKKRGG+L AKPDYKKAY+TL+NPLSI P+LYPIR++
Sbjct: 354 KRVLESLYGFEVEKVRTLNMEGKKKKRGGLLIAKPDYKKAYITLKNPLSISPDLYPIRLI 413

Query: 409 EEDKRNLNKQSKSSVVEDEAQNNRTHWL---DDNREKTQRSKSQNGYNXXXXXXXXXXXX 239
           EE+K+N NKQSKSS+VE+     ++HWL   D +R + ++S ++ G              
Sbjct: 414 EEEKKNTNKQSKSSIVEE--GEAKSHWLDGKDGDRFRPEKSSAERG----RGGRGGAAAA 467

Query: 238 XAKFPWTSMR 209
            AKFPW+ MR
Sbjct: 468 AAKFPWSGMR 477


>ref|XP_002270942.2| PREDICTED: uncharacterized protein LOC100245960 [Vitis vinifera]
           gi|296084744|emb|CBI25888.3| unnamed protein product
           [Vitis vinifera]
          Length = 170

 Score =  226 bits (576), Expect = 5e-57
 Identities = 116/174 (66%), Positives = 141/174 (81%), Gaps = 3/174 (1%)
 Frame = -1

Query: 721 MGSRLGRRVVHFANLPIKLLMPNSFTNIQEIALKTIPSATKIEIKRVLESLYGFEVEKVR 542
           MGSRLGRRV++F NLPIKLLMP+SFTNI+EIALKT+PSA+KIEIKRVLESLYGFEVEKVR
Sbjct: 1   MGSRLGRRVINFTNLPIKLLMPSSFTNIKEIALKTVPSASKIEIKRVLESLYGFEVEKVR 60

Query: 541 TLNMEGKKKKRGGVLFAKPDYKKAYVTLRNPLSIDPNLYPIRIVEEDKRNLNKQSKSSVV 362
           TLNMEGKKKKRGG+L AKPDYKKAY+TL+NPLSI P+LYPIR++EE+K+N NKQSKSS+V
Sbjct: 61  TLNMEGKKKKRGGLLIAKPDYKKAYITLKNPLSISPDLYPIRLIEEEKKNTNKQSKSSIV 120

Query: 361 EDEAQNNRTHWL---DDNREKTQRSKSQNGYNXXXXXXXXXXXXXAKFPWTSMR 209
           E+     ++HWL   D +R + ++S ++ G               AKFPW+ MR
Sbjct: 121 EE--GEAKSHWLDGKDGDRFRPEKSSAERG-----RGGRGGAAAAAKFPWSGMR 167


>ref|XP_003552058.1| PREDICTED: uncharacterized protein LOC100800404 [Glycine max]
          Length = 176

 Score =  225 bits (573), Expect = 1e-56
 Identities = 117/173 (67%), Positives = 134/173 (77%), Gaps = 2/173 (1%)
 Frame = -1

Query: 721 MGSRLGRRVVHFANLPIKLLMPNSFTNIQEIALKTIPSATKIEIKRVLESLYGFEVEKVR 542
           MGSRLGRRVV FANLPIKLLMPNSFTNI EIALKTIPSATKIEIKRVL+SLYGF+V+KVR
Sbjct: 1   MGSRLGRRVVQFANLPIKLLMPNSFTNIHEIALKTIPSATKIEIKRVLQSLYGFDVDKVR 60

Query: 541 TLNMEGKKKKRGGVLFAKPDYKKAYVTLRNPLSIDPNLYPIRIVEEDKRNLNKQSKSSVV 362
           TLNMEGKKKKRGG+L AKPDYKKAYVTL+ PLSI P+LYPIRI++EDK+ +NKQ+KSS+V
Sbjct: 61  TLNMEGKKKKRGGLLIAKPDYKKAYVTLKTPLSISPDLYPIRIIDEDKKRINKQAKSSLV 120

Query: 361 EDEAQNNRT--HWLDDNREKTQRSKSQNGYNXXXXXXXXXXXXXAKFPWTSMR 209
           +D   +     HWL D +E     + Q                 AKFPW+SMR
Sbjct: 121 QDHEAHTEAHHHWLHDRKEAQPPFRPQK----HGRLGRPEGASNAKFPWSSMR 169


>gb|ABB17000.1| ribosomal protein L23 family protein [Solanum tuberosum]
          Length = 188

 Score =  220 bits (561), Expect = 3e-55
 Identities = 114/184 (61%), Positives = 142/184 (77%), Gaps = 13/184 (7%)
 Frame = -1

Query: 721 MGSRLGRRVVHFANLPIKLLMPNSFTNIQEIALKTIPSATKIEIKRVLESLYGFEVEKVR 542
           MGSRLGRRVV+FANLPIKLLMP+SF+NI EI+LKTIPSA+KIEIKRVLESLYGFEVEKV+
Sbjct: 1   MGSRLGRRVVNFANLPIKLLMPSSFSNITEISLKTIPSASKIEIKRVLESLYGFEVEKVQ 60

Query: 541 TLNMEGKKKKRGGVLFAKPDYKKAYVTLRNPLSIDPNLYPIRIVEEDKRNLNKQSKSSVV 362
           TLNM+GKKKKRGG+L AKPDYKKAYVTLRNPLSI P+L+PI +++E+K+N++K+SKSS+V
Sbjct: 61  TLNMDGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDLFPIGVIQEEKKNMSKKSKSSIV 120

Query: 361 EDEAQNNRTHWLDDNREKTQRSKSQNGY-------------NXXXXXXXXXXXXXAKFPW 221
           ED+ +  + HWLD+ ++   RS+ + G                            AKFPW
Sbjct: 121 EDD-EPKKMHWLDEKKDGRNRSEMRFGRGRDHRSGQRSDVGRDRGGEHRDVGAAAAKFPW 179

Query: 220 TSMR 209
           +SMR
Sbjct: 180 SSMR 183


Top