BLASTX nr result

ID: Glycyrrhiza23_contig00005603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005603
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538171.1| PREDICTED: double-stranded RNA-binding prote...    61   8e-08
ref|NP_001241242.1| uncharacterized protein LOC100812728 [Glycin...    57   1e-06

>ref|XP_003538171.1| PREDICTED: double-stranded RNA-binding protein 2-like [Glycine max]
          Length = 411

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/54 (66%), Positives = 39/54 (72%), Gaps = 7/54 (12%)
 Frame = -2

Query: 434 KDEPVPVSKGGGPSTISAPNEEDK-------TDTKTESIPPESETVQSLEQLKI 294
           KDEPV V K   P TISAP+ EDK       T+TKTE+IPPE ETVQSLEQLKI
Sbjct: 359 KDEPVAVPKDDSP-TISAPSLEDKLPTKTPETETKTENIPPEPETVQSLEQLKI 411


>ref|NP_001241242.1| uncharacterized protein LOC100812728 [Glycine max]
           gi|255644888|gb|ACU22944.1| unknown [Glycine max]
          Length = 401

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/55 (58%), Positives = 39/55 (70%), Gaps = 7/55 (12%)
 Frame = -2

Query: 437 RKDEPVPVSKGGGPSTISAPNEEDK-------TDTKTESIPPESETVQSLEQLKI 294
           RKDEPVP+ K   P TISAP+ EDK        +TKTE+IPP+ + V+SLEQLKI
Sbjct: 348 RKDEPVPIPKDE-PPTISAPSPEDKLPAKTPEAETKTENIPPKPDMVKSLEQLKI 401


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