BLASTX nr result

ID: Glycyrrhiza23_contig00005586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005586
         (995 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554010.1| PREDICTED: putative H/ACA ribonucleoprotein ...   199   1e-48
ref|XP_003548749.1| PREDICTED: putative H/ACA ribonucleoprotein ...   199   1e-48
ref|XP_002525428.1| H/ACA ribonucleoprotein complex subunit, put...   196   6e-48
ref|XP_004147534.1| PREDICTED: putative H/ACA ribonucleoprotein ...   196   7e-48
ref|NP_001132376.1| uncharacterized protein LOC100193822 [Zea ma...   195   1e-47

>ref|XP_003554010.1| PREDICTED: putative H/ACA ribonucleoprotein complex subunit 1-like
           protein 1-like [Glycine max]
          Length = 204

 Score =  199 bits (505), Expect = 1e-48
 Identities = 92/101 (91%), Positives = 101/101 (100%)
 Frame = +1

Query: 337 DEGPPSEVVEVSTFMHACEGDAVTKLTNEKIPYFNAPIYLQNMTQIGKVDEIFGPINESY 516
           DEGPPSEVVEVS+FMHACEGDAVTKLTNEK+P+FNAPIYL+NMTQIGKVDEIFGPINE+Y
Sbjct: 57  DEGPPSEVVEVSSFMHACEGDAVTKLTNEKVPFFNAPIYLKNMTQIGKVDEIFGPINEAY 116

Query: 517 FSVKMMEGVVATSYSAGDKFYIDPRKLLPLARFLPQPKGQA 639
           FS+KMMEG+VATSYS+GDKFYIDPRKLLPLARFLPQPKGQ+
Sbjct: 117 FSIKMMEGIVATSYSSGDKFYIDPRKLLPLARFLPQPKGQS 157


>ref|XP_003548749.1| PREDICTED: putative H/ACA ribonucleoprotein complex subunit 1-like
           protein 1-like [Glycine max]
          Length = 195

 Score =  199 bits (505), Expect = 1e-48
 Identities = 92/101 (91%), Positives = 101/101 (100%)
 Frame = +1

Query: 337 DEGPPSEVVEVSTFMHACEGDAVTKLTNEKIPYFNAPIYLQNMTQIGKVDEIFGPINESY 516
           DEGPPSEVVEVS+FMHACEGDAVTKLTNEK+P+FNAPIYL+NMTQIGKVDEIFGPINE+Y
Sbjct: 44  DEGPPSEVVEVSSFMHACEGDAVTKLTNEKVPFFNAPIYLKNMTQIGKVDEIFGPINEAY 103

Query: 517 FSVKMMEGVVATSYSAGDKFYIDPRKLLPLARFLPQPKGQA 639
           FS+KMMEG+VATSYS+GDKFYIDPRKLLPLARFLPQPKGQ+
Sbjct: 104 FSIKMMEGIVATSYSSGDKFYIDPRKLLPLARFLPQPKGQS 144


>ref|XP_002525428.1| H/ACA ribonucleoprotein complex subunit, putative [Ricinus
           communis] gi|223535241|gb|EEF36918.1| H/ACA
           ribonucleoprotein complex subunit, putative [Ricinus
           communis]
          Length = 194

 Score =  196 bits (499), Expect = 6e-48
 Identities = 93/103 (90%), Positives = 98/103 (95%)
 Frame = +1

Query: 337 DEGPPSEVVEVSTFMHACEGDAVTKLTNEKIPYFNAPIYLQNMTQIGKVDEIFGPINESY 516
           DEGPPSEV+EVSTF+HACEGDAVTKLTNEKIPYFNAPI+L+N TQIGKVDEIFGPINESY
Sbjct: 39  DEGPPSEVIEVSTFLHACEGDAVTKLTNEKIPYFNAPIFLENKTQIGKVDEIFGPINESY 98

Query: 517 FSVKMMEGVVATSYSAGDKFYIDPRKLLPLARFLPQPKGQAQA 645
           FSVKMMEG+VATSY  GDKFYIDP KLLPL RFLPQPKGQAQA
Sbjct: 99  FSVKMMEGIVATSYKPGDKFYIDPYKLLPLERFLPQPKGQAQA 141


>ref|XP_004147534.1| PREDICTED: putative H/ACA ribonucleoprotein complex subunit 1-like
           protein 1-like [Cucumis sativus]
           gi|449484903|ref|XP_004157013.1| PREDICTED: putative
           H/ACA ribonucleoprotein complex subunit 1-like protein
           1-like [Cucumis sativus]
          Length = 194

 Score =  196 bits (498), Expect = 7e-48
 Identities = 92/100 (92%), Positives = 98/100 (98%)
 Frame = +1

Query: 337 DEGPPSEVVEVSTFMHACEGDAVTKLTNEKIPYFNAPIYLQNMTQIGKVDEIFGPINESY 516
           DEGPPSEVVEVSTF+HACEGDAVTKLTNEKIP+FNAPIYLQN TQIGKVDEIFGPINESY
Sbjct: 42  DEGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESY 101

Query: 517 FSVKMMEGVVATSYSAGDKFYIDPRKLLPLARFLPQPKGQ 636
           FS+KMMEG+VATSY++GDKFYIDP KLLPLARFLPQPKGQ
Sbjct: 102 FSIKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQ 141


>ref|NP_001132376.1| uncharacterized protein LOC100193822 [Zea mays]
           gi|194694218|gb|ACF81193.1| unknown [Zea mays]
          Length = 191

 Score =  195 bits (496), Expect = 1e-47
 Identities = 90/102 (88%), Positives = 98/102 (96%)
 Frame = +1

Query: 337 DEGPPSEVVEVSTFMHACEGDAVTKLTNEKIPYFNAPIYLQNMTQIGKVDEIFGPINESY 516
           DEGPP+EVVEVSTF+HACEGDAVTKLTNEK+PYFNAPIYLQN TQ+GKVDEIFGPINESY
Sbjct: 41  DEGPPAEVVEVSTFVHACEGDAVTKLTNEKVPYFNAPIYLQNKTQVGKVDEIFGPINESY 100

Query: 517 FSVKMMEGVVATSYSAGDKFYIDPRKLLPLARFLPQPKGQAQ 642
           FSVKMMEG++ATSY  GDKFYIDP KLLPL+RFLPQPKGQ+Q
Sbjct: 101 FSVKMMEGIIATSYKEGDKFYIDPMKLLPLSRFLPQPKGQSQ 142


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